RNA–Protein interactions for RNA: ENST00000245323.4

EFNB2-201, Transcript of ephrin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB2, Length 4,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2-201ENST00000245323 POLA1P09884 1462 aaPredicted RBP15.15■□□□□ 0.02
EFNB2-201ENST00000245323 CUX1P39880 1505 aa15.15■□□□□ 0.02
EFNB2-201ENST00000245323 AFAP1Q8N556 730 aa15.15■□□□□ 0.02
EFNB2-201ENST00000245323 CCDC18Q5T9S5 1454 aa15.14■□□□□ 0.01
EFNB2-201ENST00000245323 TOPBP1Q92547 1522 aa15.14■□□□□ 0.01
EFNB2-201ENST00000245323 U2SURPO15042 1029 aaKnown RBP15.13■□□□□ 0.01
EFNB2-201ENST00000245323 ANP32AP39687 249 aaKnown RBP15.13■□□□□ 0.01
EFNB2-201ENST00000245323 LAS1LQ9Y4W2 734 aaKnown RBP15.13■□□□□ 0.01
EFNB2-201ENST00000245323 PHLDB1Q86UU1 1377 aa15.13■□□□□ 0.01
EFNB2-201ENST00000245323 ARAP1Q96P48 1450 aa15.12■□□□□ 0.01
EFNB2-201ENST00000245323 CDCA8Q53HL2 280 aa15.11■□□□□ 0.01
EFNB2-201ENST00000245323 TMF1P82094 1093 aa15.11■□□□□ 0.01
EFNB2-201ENST00000245323 TRAK1Q9UPV9 953 aa15.09■□□□□ 0.01
EFNB2-201ENST00000245323 GRIN2BQ13224 1484 aa15.08■□□□□ 0.01
EFNB2-201ENST00000245323 ARXQ96QS3 562 aa15.07■□□□□ 0
EFNB2-201ENST00000245323 KIF21BO75037 1637 aa15.07■□□□□ 0
EFNB2-201ENST00000245323 DHX57Q6P158 1386 aaKnown RBP15.06■□□□□ 0
EFNB2-201ENST00000245323 PRG4Q92954 1404 aaPredicted RBP15.06■□□□□ 0
EFNB2-201ENST00000245323 ROCK2O75116 1388 aaKnown RBP15.06■□□□□ 0
EFNB2-201ENST00000245323 MRC2Q9UBG0 1479 aa15.05■□□□□ 0
EFNB2-201ENST00000245323 CFAP53Q96M91 514 aa15.05■□□□□ 0
EFNB2-201ENST00000245323 HMGXB3Q12766 1538 aa15.05■□□□□ -0
EFNB2-201ENST00000245323 NBR1Q14596 966 aa15.04■□□□□ -0
EFNB2-201ENST00000245323 ST20-MTHFSA0A0A6YYL1 179 aa15.04■□□□□ -0
EFNB2-201ENST00000245323 PAK3O75914 559 aaPredicted RBP15.04■□□□□ -0
EFNB2-201ENST00000245323 RSPH4AQ5TD94 716 aa15.02■□□□□ -0
EFNB2-201ENST00000245323 SNAPC4Q5SXM2 1469 aa15.01□□□□□ -0.01
EFNB2-201ENST00000245323 TIMELESSQ9UNS1 1208 aa15.01□□□□□ -0.01
EFNB2-201ENST00000245323 PRDM2Q13029 1718 aa15.01□□□□□ -0.01
EFNB2-201ENST00000245323 MORC1Q86VD1 984 aa15.01□□□□□ -0.01
EFNB2-201ENST00000245323 FRAT1Q92837 279 aaPredicted RBP15□□□□□ -0.01
EFNB2-201ENST00000245323 PRXQ9BXM0 1461 aa14.99□□□□□ -0.01
EFNB2-201ENST00000245323 B4GALNT3Q6L9W6 998 aa14.98□□□□□ -0.01
EFNB2-201ENST00000245323 RAPGEF3O95398 923 aa14.98□□□□□ -0.01
EFNB2-201ENST00000245323 FGD6Q6ZV73 1430 aa14.97□□□□□ -0.01
EFNB2-201ENST00000245323 HDGFP51858 240 aaKnown RBP14.97□□□□□ -0.01
EFNB2-201ENST00000245323 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.97□□□□□ -0.01
EFNB2-201ENST00000245323 MAPK8IP3Q9UPT6 1336 aa14.96□□□□□ -0.01
EFNB2-201ENST00000245323 TOP2BQ02880 1626 aa14.95□□□□□ -0.02
EFNB2-201ENST00000245323 LRRC9Q6ZRR7 1453 aa14.95□□□□□ -0.02
EFNB2-201ENST00000245323 UNC13AQ9UPW8 1703 aa14.95□□□□□ -0.02
EFNB2-201ENST00000245323 ZNF608Q9ULD9 1512 aaPredicted RBP14.95□□□□□ -0.02
EFNB2-201ENST00000245323 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.94□□□□□ -0.02
EFNB2-201ENST00000245323 NUDCQ9Y266 331 aa14.94□□□□□ -0.02
EFNB2-201ENST00000245323 KIF15Q9NS87 1388 aa14.94□□□□□ -0.02
EFNB2-201ENST00000245323 IFT140Q96RY7 1462 aa14.94□□□□□ -0.02
EFNB2-201ENST00000245323 MYOM3Q5VTT5 1437 aa14.93□□□□□ -0.02
EFNB2-201ENST00000245323 NCOA2Q15596 1464 aa14.92□□□□□ -0.02
EFNB2-201ENST00000245323 CCDC144AA2RUR9 1427 aa14.92□□□□□ -0.02
EFNB2-201ENST00000245323 HSP90AA1P07900 732 aaKnown RBP14.91□□□□□ -0.02
EFNB2-201ENST00000245323 U2AF1L5P0DN76 240 aaPredicted RBP14.91□□□□□ -0.02
EFNB2-201ENST00000245323 U2AF1Q01081 240 aaKnown RBP eCLIP14.91□□□□□ -0.02
EFNB2-201ENST00000245323 TMEM132EQ6IEE7 984 aa14.91□□□□□ -0.02
EFNB2-201ENST00000245323 MINK1Q8N4C8 1332 aaPredicted RBP14.91□□□□□ -0.02
EFNB2-201ENST00000245323 CASKIN1Q8WXD9 1431 aa14.9□□□□□ -0.02
EFNB2-201ENST00000245323 EID1Q9Y6B2 187 aa14.89□□□□□ -0.03
EFNB2-201ENST00000245323 CCDC146Q8IYE0 955 aa14.88□□□□□ -0.03
EFNB2-201ENST00000245323 URB2Q14146 1524 aaKnown RBP14.88□□□□□ -0.03
EFNB2-201ENST00000245323 LTV1Q96GA3 475 aaPredicted RBP14.88□□□□□ -0.03
EFNB2-201ENST00000245323 DNMBPQ6XZF7 1577 aa14.87□□□□□ -0.03
EFNB2-201ENST00000245323 HDGFL2Q7Z4V5 671 aaPredicted RBP14.87□□□□□ -0.03
EFNB2-201ENST00000245323 PANK3Q9H999 370 aa14.87□□□□□ -0.03
EFNB2-201ENST00000245323 NGDNQ8NEJ9 315 aaKnown RBP14.86□□□□□ -0.03
EFNB2-201ENST00000245323 RGS3P49796 1198 aa14.86□□□□□ -0.03
EFNB2-201ENST00000245323 UPF2Q9HAU5 1272 aaKnown RBP14.86□□□□□ -0.03
EFNB2-201ENST00000245323 FTSJ3Q8IY81 847 aaKnown RBP14.85□□□□□ -0.03
EFNB2-201ENST00000245323 ANKRD50Q9ULJ7 1429 aa14.85□□□□□ -0.03
EFNB2-201ENST00000245323 CDK13Q14004 1512 aaKnown RBP14.84□□□□□ -0.03
EFNB2-201ENST00000245323 SCAPERQ9BY12 1400 aa14.83□□□□□ -0.03
EFNB2-201ENST00000245323 KTN1Q86UP2 1357 aaKnown RBP14.83□□□□□ -0.04
EFNB2-201ENST00000245323 PLB1Q6P1J6 1458 aa14.83□□□□□ -0.04
EFNB2-201ENST00000245323 RRP7AQ9Y3A4 280 aaKnown RBP14.82□□□□□ -0.04
EFNB2-201ENST00000245323 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
EFNB2-201ENST00000245323 SYNJ2O15056 1496 aa14.81□□□□□ -0.04
EFNB2-201ENST00000245323 ABCA10Q8WWZ4 1543 aa14.81□□□□□ -0.04
EFNB2-201ENST00000245323 CFAP70Q5T0N1 1121 aa14.81□□□□□ -0.04
EFNB2-201ENST00000245323 VGFO15240 615 aaPredicted RBP14.8□□□□□ -0.04
EFNB2-201ENST00000245323 NBPF1Q3BBV0 1214 aa14.8□□□□□ -0.04
EFNB2-201ENST00000245323 ARHGAP5Q13017 1502 aa14.8□□□□□ -0.04
EFNB2-201ENST00000245323 CCER2I3L3R5 266 aa14.8□□□□□ -0.04
EFNB2-201ENST00000245323 CSB-PGBD3P0DP91 1061 aa14.8□□□□□ -0.04
EFNB2-201ENST00000245323 MYH16Q9H6N6 1097 aa14.79□□□□□ -0.04
EFNB2-201ENST00000245323 PPP4R2Q9NY27 417 aa14.79□□□□□ -0.04
EFNB2-201ENST00000245323 USP47Q96K76 1375 aa14.79□□□□□ -0.04
EFNB2-201ENST00000245323 LAMC3Q9Y6N6 1575 aa14.78□□□□□ -0.04
EFNB2-201ENST00000245323 ZNF330Q9Y3S2 320 aaPredicted RBP14.76□□□□□ -0.05
EFNB2-201ENST00000245323 TERF2IPQ9NYB0 399 aa14.76□□□□□ -0.05
EFNB2-201ENST00000245323 KIAA0586Q9BVV6 1533 aa14.75□□□□□ -0.05
EFNB2-201ENST00000245323 FYCO1Q9BQS8 1478 aa14.75□□□□□ -0.05
EFNB2-201ENST00000245323 APBB1O00213 710 aa14.74□□□□□ -0.05
EFNB2-201ENST00000245323 TROQ12816 1431 aaPredicted RBP14.74□□□□□ -0.05
EFNB2-201ENST00000245323 NBPF8Q3BBV2 869 aa14.74□□□□□ -0.05
EFNB2-201ENST00000245323 ELL2O00472 640 aaPredicted RBP14.74□□□□□ -0.05
EFNB2-201ENST00000245323 NUTM2GQ5VZR2 741 aa14.74□□□□□ -0.05
EFNB2-201ENST00000245323 CLUAP1Q96AJ1 413 aa14.74□□□□□ -0.05
EFNB2-201ENST00000245323 PRKRIP1Q9H875 184 aaPredicted RBP14.72□□□□□ -0.05
EFNB2-201ENST00000245323 AMPHP49418 695 aa14.72□□□□□ -0.05
EFNB2-201ENST00000245323 CABP2Q9NPB3 220 aa14.72□□□□□ -0.05
EFNB2-201ENST00000245323 CCDC9Q9Y3X0 531 aaKnown RBP14.72□□□□□ -0.05
EFNB2-201ENST00000245323 UACAQ9BZF9 1416 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms