RNA–Protein interactions for RNA: ENST00000235878.5

GBP3-201, Transcript of guanylate binding protein 3, humanhuman

TSL 2

Gene GBP3, Length 2,062 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-201ENST00000235878 ZNF608Q9ULD9 1512 aaPredicted RBP10.87□□□□□ -0.67
GBP3-201ENST00000235878 CCER2I3L3R5 266 aa10.86□□□□□ -0.67
GBP3-201ENST00000235878 POTEDQ86YR6 584 aa10.86□□□□□ -0.67
GBP3-201ENST00000235878 DISP1Q96F81 1524 aa10.86□□□□□ -0.67
GBP3-201ENST00000235878 SUPT16HQ9Y5B9 1047 aaKnown RBP10.85□□□□□ -0.67
GBP3-201ENST00000235878 GCC2Q8IWJ2 1684 aa10.85□□□□□ -0.67
GBP3-201ENST00000235878 CDK13Q14004 1512 aaKnown RBP10.85□□□□□ -0.67
GBP3-201ENST00000235878 RRP7BPQ9NSQ0 103 aa10.84□□□□□ -0.67
GBP3-201ENST00000235878 HIRIP3Q9BW71 556 aaPredicted RBP10.83□□□□□ -0.68
GBP3-201ENST00000235878 ROCK1Q13464 1354 aa10.82□□□□□ -0.68
GBP3-201ENST00000235878 KDM6BO15054 1643 aa10.82□□□□□ -0.68
GBP3-201ENST00000235878 KIAA0556O60303 1618 aa10.82□□□□□ -0.68
GBP3-201ENST00000235878 CHIC2Q9UKJ5 165 aa10.81□□□□□ -0.68
GBP3-201ENST00000235878 NUP153P49790 1475 aaKnown RBP10.81□□□□□ -0.68
GBP3-201ENST00000235878 GRIN2AQ12879 1464 aa10.81□□□□□ -0.68
GBP3-201ENST00000235878 MPHOSPH9Q99550 1183 aa10.8□□□□□ -0.68
GBP3-201ENST00000235878 U3KPZ7 1027 aaPredicted RBP10.8□□□□□ -0.68
GBP3-201ENST00000235878 ABCC5O15440 1437 aa10.79□□□□□ -0.68
GBP3-201ENST00000235878 DAPK1P53355 1430 aa10.79□□□□□ -0.68
GBP3-201ENST00000235878 ANP32CO43423 234 aa10.78□□□□□ -0.68
GBP3-201ENST00000235878 RAPGEF6Q8TEU7 1601 aa10.78□□□□□ -0.68
GBP3-201ENST00000235878 EIF4G3O43432 1585 aaKnown RBP10.77□□□□□ -0.69
GBP3-201ENST00000235878 DNMT1P26358 1616 aaKnown RBP10.77□□□□□ -0.69
GBP3-201ENST00000235878 TRIM52Q96A61 297 aa10.77□□□□□ -0.69
GBP3-201ENST00000235878 ANKRD30BQ9BXX2 1392 aa10.76□□□□□ -0.69
GBP3-201ENST00000235878 MAGI1Q96QZ7 1491 aaPredicted RBP10.76□□□□□ -0.69
GBP3-201ENST00000235878 CDK11AQ9UQ88 783 aaPredicted RBP10.76□□□□□ -0.69
GBP3-201ENST00000235878 ARID3CA6NKF2 412 aa10.75□□□□□ -0.69
GBP3-201ENST00000235878 ATXN8OSP0DMR3 200 aa10.75□□□□□ -0.69
GBP3-201ENST00000235878 ZNF644Q9H582 1327 aaPredicted RBP10.74□□□□□ -0.69
GBP3-201ENST00000235878 TROQ12816 1431 aaPredicted RBP10.74□□□□□ -0.69
GBP3-201ENST00000235878 HSPA5P11021 654 aaKnown RBP10.74□□□□□ -0.69
GBP3-201ENST00000235878 L3MBTL2Q969R5 705 aa10.74□□□□□ -0.69
GBP3-201ENST00000235878 SYNJ2O15056 1496 aa10.74□□□□□ -0.69
GBP3-201ENST00000235878 WASHC2AQ641Q2 1341 aa10.73□□□□□ -0.69
GBP3-201ENST00000235878 CEP170Q5SW79 1584 aa10.73□□□□□ -0.69
GBP3-201ENST00000235878 RPRD2Q5VT52 1461 aaKnown RBP10.73□□□□□ -0.69
GBP3-201ENST00000235878 NUP160Q12769 1436 aa10.73□□□□□ -0.69
GBP3-201ENST00000235878 PRG4Q92954 1404 aaPredicted RBP10.73□□□□□ -0.69
GBP3-201ENST00000235878 GPATCH8Q9UKJ3 1502 aaKnown RBP10.72□□□□□ -0.69
GBP3-201ENST00000235878 EIF4G2P78344 907 aaKnown RBP eCLIP10.71□□□□□ -0.69
GBP3-201ENST00000235878 CHMP7Q8WUX9 453 aaPredicted RBP10.71□□□□□ -0.69
GBP3-201ENST00000235878 NCOA1Q15788 1441 aa10.7□□□□□ -0.7
GBP3-201ENST00000235878 JPH4Q96JJ6 628 aa10.7□□□□□ -0.7
GBP3-201ENST00000235878 PLB1Q6P1J6 1458 aa10.7□□□□□ -0.7
GBP3-201ENST00000235878 ADCY10Q96PN6 1610 aa10.7□□□□□ -0.7
GBP3-201ENST00000235878 ADGRL2O95490 1459 aa10.69□□□□□ -0.7
GBP3-201ENST00000235878 TEX14Q8IWB6 1497 aa10.69□□□□□ -0.7
GBP3-201ENST00000235878 NBPF8Q3BBV2 869 aa10.69□□□□□ -0.7
GBP3-201ENST00000235878 PZPP20742 1482 aa10.69□□□□□ -0.7
GBP3-201ENST00000235878 CARMIL2Q6F5E8 1435 aa10.68□□□□□ -0.7
GBP3-201ENST00000235878 SPATA31E1Q6ZUB1 1445 aa10.68□□□□□ -0.7
GBP3-201ENST00000235878 CAMSAP2Q08AD1 1489 aa10.68□□□□□ -0.7
GBP3-201ENST00000235878 C11orf95C9JLR9 678 aaPredicted RBP10.68□□□□□ -0.7
GBP3-201ENST00000235878 CFDP1Q9UEE9 299 aaPredicted RBP10.68□□□□□ -0.7
GBP3-201ENST00000235878 ERCC6Q03468 1493 aa10.68□□□□□ -0.7
GBP3-201ENST00000235878 SAMD1Q6SPF0 538 aaPredicted RBP10.67□□□□□ -0.7
GBP3-201ENST00000235878 ITSN2Q9NZM3 1697 aa10.66□□□□□ -0.7
GBP3-201ENST00000235878 ABCA8O94911 1581 aa10.66□□□□□ -0.7
GBP3-201ENST00000235878 FKBP8Q14318 412 aa10.65□□□□□ -0.7
GBP3-201ENST00000235878 KIF14Q15058 1648 aa10.65□□□□□ -0.7
GBP3-201ENST00000235878 CCDC7Q96M83 1385 aa10.65□□□□□ -0.7
GBP3-201ENST00000235878 TSHZ2Q9NRE2 1034 aa10.65□□□□□ -0.7
GBP3-201ENST00000235878 CNTLNQ9NXG0 1405 aa10.65□□□□□ -0.7
GBP3-201ENST00000235878 ABCC10Q5T3U5 1492 aa10.65□□□□□ -0.7
GBP3-201ENST00000235878 ADGBQ8N7X0 1667 aa10.64□□□□□ -0.71
GBP3-201ENST00000235878 ATP10BO94823 1461 aa10.64□□□□□ -0.71
GBP3-201ENST00000235878 ATF5Q9Y2D1 282 aaPredicted RBP10.63□□□□□ -0.71
GBP3-201ENST00000235878 MBD5Q9P267 1494 aa10.63□□□□□ -0.71
GBP3-201ENST00000235878 KIAA1107Q9UPP5 1409 aa10.63□□□□□ -0.71
GBP3-201ENST00000235878 CROCC2H7BZ55 1655 aa10.63□□□□□ -0.71
GBP3-201ENST00000235878 ANKRD30AQ9BXX3 1397 aa10.63□□□□□ -0.71
GBP3-201ENST00000235878 PLEKHD1A6NEE1 506 aa10.62□□□□□ -0.71
GBP3-201ENST00000235878 FBLN2P98095 1184 aa10.62□□□□□ -0.71
GBP3-201ENST00000235878 PRKRIP1Q9H875 184 aaPredicted RBP10.61□□□□□ -0.71
GBP3-201ENST00000235878 SHANK2Q9UPX8 1470 aa10.61□□□□□ -0.71
GBP3-201ENST00000235878 ANKRD50Q9ULJ7 1429 aa10.6□□□□□ -0.71
GBP3-201ENST00000235878 CDC42BPAQ5VT25 1732 aa10.6□□□□□ -0.71
GBP3-201ENST00000235878 KIF7Q2M1P5 1343 aa10.6□□□□□ -0.71
GBP3-201ENST00000235878 CCDC184Q52MB2 194 aa10.59□□□□□ -0.71
GBP3-201ENST00000235878 ZNF777Q9ULD5 760 aaPredicted RBP10.59□□□□□ -0.71
GBP3-201ENST00000235878 PKD2Q13563 968 aa10.59□□□□□ -0.71
GBP3-201ENST00000235878 RNF39Q9H2S5 420 aa10.59□□□□□ -0.71
GBP3-201ENST00000235878 NEFLP07196 543 aa10.58□□□□□ -0.72
GBP3-201ENST00000235878 UHRF1BP1Q6BDS2 1440 aa10.58□□□□□ -0.72
GBP3-201ENST00000235878 KDM5DQ9BY66 1539 aa10.58□□□□□ -0.72
GBP3-201ENST00000235878 POLR1AO95602 1720 aaPredicted RBP10.58□□□□□ -0.72
GBP3-201ENST00000235878 HNRNPUQ00839 825 aaKnown RBP eCLIP10.57□□□□□ -0.72
GBP3-201ENST00000235878 BCANQ96GW7 911 aa10.57□□□□□ -0.72
GBP3-201ENST00000235878 PTPRGP23470 1445 aa10.57□□□□□ -0.72
GBP3-201ENST00000235878 C9orf84Q5VXU9 1444 aa10.57□□□□□ -0.72
GBP3-201ENST00000235878 ARHGEF5Q12774 1597 aa10.56□□□□□ -0.72
GBP3-201ENST00000235878 ARID4BQ4LE39 1312 aaPredicted RBP10.56□□□□□ -0.72
GBP3-201ENST00000235878 NUP155O75694 1391 aa10.55□□□□□ -0.72
GBP3-201ENST00000235878 DHX29Q7Z478 1369 aaKnown RBP10.54□□□□□ -0.72
GBP3-201ENST00000235878 TSPY4P0CV99 314 aa10.54□□□□□ -0.72
GBP3-201ENST00000235878 TSPY10P0CW01 314 aa10.54□□□□□ -0.72
GBP3-201ENST00000235878 RSPH4AQ5TD94 716 aa10.54□□□□□ -0.72
GBP3-201ENST00000235878 HNRNPMP52272 730 aaKnown RBP eCLIP10.53□□□□□ -0.72
GBP3-201ENST00000235878 ERICH6BQ5W0A0 696 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms