RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 PUS7Q96PZ0 661 aaKnown RBP11.34□□□□□ -0.59
SPARC-201ENST00000231061 IGF1RP08069 1367 aa11.33□□□□□ -0.6
SPARC-201ENST00000231061 TRHP20396 242 aaPredicted RBP11.33□□□□□ -0.6
SPARC-201ENST00000231061 CARMIL1Q5VZK9 1371 aa11.33□□□□□ -0.6
SPARC-201ENST00000231061 CNGB1Q14028 1251 aaPredicted RBP11.33□□□□□ -0.6
SPARC-201ENST00000231061 SLC4A1APQ9BWU0 796 aaKnown RBP11.32□□□□□ -0.6
SPARC-201ENST00000231061 PRDM16Q9HAZ2 1276 aa11.32□□□□□ -0.6
SPARC-201ENST00000231061 DNAJC5BQ9UF47 199 aa11.32□□□□□ -0.6
SPARC-201ENST00000231061 PLCD4Q9BRC7 762 aa11.31□□□□□ -0.6
SPARC-201ENST00000231061 RNF216Q9NWF9 866 aaPredicted RBP11.31□□□□□ -0.6
SPARC-201ENST00000231061 MSH5O43196 834 aa11.31□□□□□ -0.6
SPARC-201ENST00000231061 CADPSQ9ULU8 1353 aa11.31□□□□□ -0.6
SPARC-201ENST00000231061 NECTIN2Q92692 538 aa11.31□□□□□ -0.6
SPARC-201ENST00000231061 RAB3GAP2Q9H2M9 1393 aa11.3□□□□□ -0.6
SPARC-201ENST00000231061 FGD5Q6ZNL6 1462 aa11.3□□□□□ -0.6
SPARC-201ENST00000231061 OS9Q13438 667 aaPredicted RBP11.3□□□□□ -0.6
SPARC-201ENST00000231061 ZNF692Q9BU19 519 aaPredicted RBP11.3□□□□□ -0.6
SPARC-201ENST00000231061 CLSTN1O94985 981 aa11.3□□□□□ -0.6
SPARC-201ENST00000231061 STAC3Q96MF2 364 aa11.3□□□□□ -0.6
SPARC-201ENST00000231061 ARID4BQ4LE39 1312 aaPredicted RBP11.29□□□□□ -0.6
SPARC-201ENST00000231061 CHRM1P11229 460 aaPredicted RBP11.26□□□□□ -0.61
SPARC-201ENST00000231061 RBM19Q9Y4C8 960 aaKnown RBP11.26□□□□□ -0.61
SPARC-201ENST00000231061 SOX12O15370 315 aa11.26□□□□□ -0.61
SPARC-201ENST00000231061 TIAM1Q13009 1591 aa11.26□□□□□ -0.61
SPARC-201ENST00000231061 FAM193AP78312 1265 aa11.25□□□□□ -0.61
SPARC-201ENST00000231061 RGS3P49796 1198 aa11.25□□□□□ -0.61
SPARC-201ENST00000231061 NBR1Q14596 966 aa11.24□□□□□ -0.61
SPARC-201ENST00000231061 SETD5Q9C0A6 1442 aa11.24□□□□□ -0.61
SPARC-201ENST00000231061 PHLDB1Q86UU1 1377 aa11.24□□□□□ -0.61
SPARC-201ENST00000231061 LRRC9Q6ZRR7 1453 aa11.23□□□□□ -0.61
SPARC-201ENST00000231061 SIN3AQ96ST3 1273 aa11.23□□□□□ -0.61
SPARC-201ENST00000231061 FHAD1B1AJZ9 1412 aa11.23□□□□□ -0.61
SPARC-201ENST00000231061 SUPT16HQ9Y5B9 1047 aaKnown RBP11.23□□□□□ -0.61
SPARC-201ENST00000231061 FHOD3Q2V2M9 1422 aa11.22□□□□□ -0.61
SPARC-201ENST00000231061 MAPK8IP2Q13387 824 aaPredicted RBP11.22□□□□□ -0.61
SPARC-201ENST00000231061 HSP90AA2PQ14568 343 aaPredicted RBP11.22□□□□□ -0.61
SPARC-201ENST00000231061 FANCD2Q9BXW9 1451 aa11.21□□□□□ -0.61
SPARC-201ENST00000231061 PRDM2Q13029 1718 aa11.21□□□□□ -0.62
SPARC-201ENST00000231061 RAD54L2Q9Y4B4 1467 aa11.2□□□□□ -0.62
SPARC-201ENST00000231061 PTMSP20962 102 aa11.2□□□□□ -0.62
SPARC-201ENST00000231061 DDX10Q13206 875 aaKnown RBP11.19□□□□□ -0.62
SPARC-201ENST00000231061 MAPKBP1O60336 1514 aa11.19□□□□□ -0.62
SPARC-201ENST00000231061 FAM9BQ8IZU0 186 aa11.19□□□□□ -0.62
SPARC-201ENST00000231061 MAP3K1Q13233 1512 aa11.18□□□□□ -0.62
SPARC-201ENST00000231061 PCF11O94913 1555 aaKnown RBP11.18□□□□□ -0.62
SPARC-201ENST00000231061 VGLL3A8MV65 326 aa11.18□□□□□ -0.62
SPARC-201ENST00000231061 PPM1GO15355 546 aaPredicted RBP11.18□□□□□ -0.62
SPARC-201ENST00000231061 KCNH8Q96L42 1107 aa11.18□□□□□ -0.62
SPARC-201ENST00000231061 HIRIP3Q9BW71 556 aaPredicted RBP11.17□□□□□ -0.62
SPARC-201ENST00000231061 ZNF830Q96NB3 372 aaPredicted RBP11.16□□□□□ -0.62
SPARC-201ENST00000231061 CC2D2AQ9P2K1 1620 aa11.16□□□□□ -0.62
SPARC-201ENST00000231061 PHF23Q9BUL5 403 aaPredicted RBP11.14□□□□□ -0.63
SPARC-201ENST00000231061 FOXD4L5Q5VV16 416 aaPredicted RBP11.14□□□□□ -0.63
SPARC-201ENST00000231061 FOXD4L4Q8WXT5 416 aaPredicted RBP11.14□□□□□ -0.63
SPARC-201ENST00000231061 KDM4AO75164 1064 aa11.13□□□□□ -0.63
SPARC-201ENST00000231061 POLA1P09884 1462 aaPredicted RBP11.13□□□□□ -0.63
SPARC-201ENST00000231061 NESP48681 1621 aa11.13□□□□□ -0.63
SPARC-201ENST00000231061 PTMAP06454 111 aaKnown RBP11.13□□□□□ -0.63
SPARC-201ENST00000231061 MTUS2Q5JR59 1369 aa11.13□□□□□ -0.63
SPARC-201ENST00000231061 WDR97A6NE52 1622 aa11.13□□□□□ -0.63
SPARC-201ENST00000231061 TOPBP1Q92547 1522 aa11.12□□□□□ -0.63
SPARC-201ENST00000231061 DNMBPQ6XZF7 1577 aa11.12□□□□□ -0.63
SPARC-201ENST00000231061 RBM25P49756 843 aaKnown RBP11.12□□□□□ -0.63
SPARC-201ENST00000231061 FYCO1Q9BQS8 1478 aa11.12□□□□□ -0.63
SPARC-201ENST00000231061 CFAP43Q8NDM7 1665 aa11.11□□□□□ -0.63
SPARC-201ENST00000231061 FKBP8Q14318 412 aa11.11□□□□□ -0.63
SPARC-201ENST00000231061 ZBTB22O15209 634 aa11.11□□□□□ -0.63
SPARC-201ENST00000231061 APPP05067 770 aa11.11□□□□□ -0.63
SPARC-201ENST00000231061 ABCA10Q8WWZ4 1543 aa11.11□□□□□ -0.63
SPARC-201ENST00000231061 CASKIN1Q8WXD9 1431 aa11.11□□□□□ -0.63
SPARC-201ENST00000231061 ANAPC15P60006 121 aa11.1□□□□□ -0.63
SPARC-201ENST00000231061 TONSLQ96HA7 1378 aa11.1□□□□□ -0.63
SPARC-201ENST00000231061 GRIPAP1Q4V328 841 aa11.1□□□□□ -0.63
SPARC-201ENST00000231061 TDRD9Q8NDG6 1382 aaKnown RBP11.1□□□□□ -0.63
SPARC-201ENST00000231061 EFCAB5A4FU69 1503 aa11.09□□□□□ -0.63
SPARC-201ENST00000231061 FMN1Q68DA7 1419 aa11.09□□□□□ -0.63
SPARC-201ENST00000231061 MYCNP04198 464 aaPredicted RBP11.09□□□□□ -0.63
SPARC-201ENST00000231061 CDCA8Q53HL2 280 aa11.08□□□□□ -0.64
SPARC-201ENST00000231061 PPP1R15AO75807 674 aaPredicted RBP11.08□□□□□ -0.64
SPARC-201ENST00000231061 ZBTB7CA1YPR0 619 aa11.08□□□□□ -0.64
SPARC-201ENST00000231061 ANP32CO43423 234 aa11.08□□□□□ -0.64
SPARC-201ENST00000231061 FAM177A1Q8N128 213 aaPredicted RBP11.08□□□□□ -0.64
SPARC-201ENST00000231061 FGD6Q6ZV73 1430 aa11.07□□□□□ -0.64
SPARC-201ENST00000231061 GPATCH11Q8N954 259 aa11.07□□□□□ -0.64
SPARC-201ENST00000231061 PRDM4Q9UKN5 801 aa11.07□□□□□ -0.64
SPARC-201ENST00000231061 RRP9O43818 475 aaKnown RBP11.06□□□□□ -0.64
SPARC-201ENST00000231061 RGS22Q8NE09 1264 aa11.06□□□□□ -0.64
SPARC-201ENST00000231061 RAD21O60216 631 aa11.06□□□□□ -0.64
SPARC-201ENST00000231061 PIAS4Q8N2W9 510 aaPredicted RBP11.06□□□□□ -0.64
SPARC-201ENST00000231061 HDAC5Q9UQL6 1122 aa11.05□□□□□ -0.64
SPARC-201ENST00000231061 AQRO60306 1485 aaKnown RBP eCLIP11.05□□□□□ -0.64
SPARC-201ENST00000231061 CCDC18Q5T9S5 1454 aa11.05□□□□□ -0.64
SPARC-201ENST00000231061 CUL7Q14999 1698 aa11.05□□□□□ -0.64
SPARC-201ENST00000231061 TRIM52Q96A61 297 aa11.05□□□□□ -0.64
SPARC-201ENST00000231061 CCDC27Q2M243 656 aa11.04□□□□□ -0.64
SPARC-201ENST00000231061 CHIC2Q9UKJ5 165 aa11.04□□□□□ -0.64
SPARC-201ENST00000231061 ARID3CA6NKF2 412 aa11.04□□□□□ -0.64
SPARC-201ENST00000231061 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.03□□□□□ -0.64
SPARC-201ENST00000231061 MPNDQ8N594 471 aa11.02□□□□□ -0.64
SPARC-201ENST00000231061 CTTNBP2Q8WZ74 1663 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms