RNA–Protein interactions for RNA: ENST00000222482.8

CPA4-201, Transcript of carboxypeptidase A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPA4, Length 2,797 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-201ENST00000222482 FOXD1Q16676 465 aa11.76□□□□□ -0.53
CPA4-201ENST00000222482 ADAMTS12P58397 1594 aa11.76□□□□□ -0.53
CPA4-201ENST00000222482 LRRIQ1Q96JM4 1722 aa11.75□□□□□ -0.53
CPA4-201ENST00000222482 NUP160Q12769 1436 aa11.75□□□□□ -0.53
CPA4-201ENST00000222482 HSPA5P11021 654 aaKnown RBP11.75□□□□□ -0.53
CPA4-201ENST00000222482 UACAQ9BZF9 1416 aa11.75□□□□□ -0.53
CPA4-201ENST00000222482 WASHC2AQ641Q2 1341 aa11.75□□□□□ -0.53
CPA4-201ENST00000222482 NAIPQ13075 1403 aa11.74□□□□□ -0.53
CPA4-201ENST00000222482 SHROOM2Q13796 1616 aa11.74□□□□□ -0.53
CPA4-201ENST00000222482 HFM1A2PYH4 1435 aa11.74□□□□□ -0.53
CPA4-201ENST00000222482 CTTNBP2Q8WZ74 1663 aa11.73□□□□□ -0.53
CPA4-201ENST00000222482 KDM5BQ9UGL1 1544 aa11.73□□□□□ -0.53
CPA4-201ENST00000222482 SENP3-EIF4A1A0A087X0R7 540 aa11.73□□□□□ -0.53
CPA4-201ENST00000222482 NCOA2Q15596 1464 aa11.72□□□□□ -0.53
CPA4-201ENST00000222482 EFCAB5A4FU69 1503 aa11.72□□□□□ -0.53
CPA4-201ENST00000222482 CEP170Q5SW79 1584 aa11.72□□□□□ -0.53
CPA4-201ENST00000222482 FAM9BQ8IZU0 186 aa11.72□□□□□ -0.53
CPA4-201ENST00000222482 FMN1Q68DA7 1419 aa11.7□□□□□ -0.54
CPA4-201ENST00000222482 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.7□□□□□ -0.54
CPA4-201ENST00000222482 C11orf95C9JLR9 678 aaPredicted RBP11.7□□□□□ -0.54
CPA4-201ENST00000222482 KDM6BO15054 1643 aa11.69□□□□□ -0.54
CPA4-201ENST00000222482 ERCC6L2Q5T890 1561 aa11.69□□□□□ -0.54
CPA4-201ENST00000222482 MYOM3Q5VTT5 1437 aa11.69□□□□□ -0.54
CPA4-201ENST00000222482 CDK11AQ9UQ88 783 aaPredicted RBP11.68□□□□□ -0.54
CPA4-201ENST00000222482 B4GALNT3Q6L9W6 998 aa11.67□□□□□ -0.54
CPA4-201ENST00000222482 MAGI3Q5TCQ9 1506 aa11.67□□□□□ -0.54
CPA4-201ENST00000222482 DENND4BO75064 1496 aaPredicted RBP11.67□□□□□ -0.54
CPA4-201ENST00000222482 TPRNQ4KMQ1 711 aa11.66□□□□□ -0.54
CPA4-201ENST00000222482 L3MBTL2Q969R5 705 aa11.66□□□□□ -0.54
CPA4-201ENST00000222482 CUL7Q14999 1698 aa11.65□□□□□ -0.54
CPA4-201ENST00000222482 EIF4G2P78344 907 aaKnown RBP eCLIP11.65□□□□□ -0.54
CPA4-201ENST00000222482 SUPT6HQ7KZ85 1726 aaKnown RBP11.64□□□□□ -0.55
CPA4-201ENST00000222482 MRS2Q9HD23 443 aa11.64□□□□□ -0.55
CPA4-201ENST00000222482 POLR3GLQ9BT43 218 aa11.63□□□□□ -0.55
CPA4-201ENST00000222482 MPHOSPH9Q99550 1183 aa11.62□□□□□ -0.55
CPA4-201ENST00000222482 NBPF8Q3BBV2 869 aa11.62□□□□□ -0.55
CPA4-201ENST00000222482 CNTLNQ9NXG0 1405 aa11.62□□□□□ -0.55
CPA4-201ENST00000222482 KIF13AQ9H1H9 1805 aa11.62□□□□□ -0.55
CPA4-201ENST00000222482 SAMD9Q5K651 1589 aa11.62□□□□□ -0.55
CPA4-201ENST00000222482 PRKRIP1Q9H875 184 aaPredicted RBP11.61□□□□□ -0.55
CPA4-201ENST00000222482 EHBP1L1Q8N3D4 1523 aa11.6□□□□□ -0.55
CPA4-201ENST00000222482 UGGT2Q9NYU1 1516 aa11.6□□□□□ -0.55
CPA4-201ENST00000222482 CDK13Q14004 1512 aaKnown RBP11.6□□□□□ -0.55
CPA4-201ENST00000222482 PRG4Q92954 1404 aaPredicted RBP11.6□□□□□ -0.55
CPA4-201ENST00000222482 FANCIQ9NVI1 1328 aa11.59□□□□□ -0.55
CPA4-201ENST00000222482 PPP4R2Q9NY27 417 aa11.59□□□□□ -0.55
CPA4-201ENST00000222482 CCDC7Q96M83 1385 aa11.59□□□□□ -0.55
CPA4-201ENST00000222482 JPH4Q96JJ6 628 aa11.58□□□□□ -0.56
CPA4-201ENST00000222482 HECW1Q76N89 1606 aa11.58□□□□□ -0.56
CPA4-201ENST00000222482 ZNF326Q5BKZ1 582 aaKnown RBP11.57□□□□□ -0.56
CPA4-201ENST00000222482 PODXL2Q9NZ53 605 aa11.57□□□□□ -0.56
CPA4-201ENST00000222482 ZNF644Q9H582 1327 aaPredicted RBP11.57□□□□□ -0.56
CPA4-201ENST00000222482 GCC2Q8IWJ2 1684 aa11.57□□□□□ -0.56
CPA4-201ENST00000222482 KIF7Q2M1P5 1343 aa11.56□□□□□ -0.56
CPA4-201ENST00000222482 NCOA1Q15788 1441 aa11.56□□□□□ -0.56
CPA4-201ENST00000222482 AKNAQ7Z591 1439 aa11.55□□□□□ -0.56
CPA4-201ENST00000222482 EIF5BO60841 1220 aaKnown RBP11.55□□□□□ -0.56
CPA4-201ENST00000222482 ABCC10Q5T3U5 1492 aa11.54□□□□□ -0.56
CPA4-201ENST00000222482 ZBED9Q6R2W3 1325 aa11.53□□□□□ -0.56
CPA4-201ENST00000222482 SLC4A1APQ9BWU0 796 aaKnown RBP11.53□□□□□ -0.56
CPA4-201ENST00000222482 NBR1Q14596 966 aa11.52□□□□□ -0.56
CPA4-201ENST00000222482 TCOF1Q13428 1488 aaKnown RBP11.52□□□□□ -0.57
CPA4-201ENST00000222482 EPRSP07814 1512 aaKnown RBP11.52□□□□□ -0.57
CPA4-201ENST00000222482 KIAA0586Q9BVV6 1533 aa11.52□□□□□ -0.57
CPA4-201ENST00000222482 PAK3O75914 559 aaPredicted RBP11.51□□□□□ -0.57
CPA4-201ENST00000222482 ADCY10Q96PN6 1610 aa11.51□□□□□ -0.57
CPA4-201ENST00000222482 NPM1P06748 294 aaKnown RBP eCLIP11.5□□□□□ -0.57
CPA4-201ENST00000222482 DIP2BQ9P265 1576 aa11.5□□□□□ -0.57
CPA4-201ENST00000222482 ANKRD30BQ9BXX2 1392 aa11.5□□□□□ -0.57
CPA4-201ENST00000222482 HOMEZQ8IX15 550 aa11.5□□□□□ -0.57
CPA4-201ENST00000222482 PLEKHG5O94827 1062 aa11.5□□□□□ -0.57
CPA4-201ENST00000222482 TEX14Q8IWB6 1497 aa11.49□□□□□ -0.57
CPA4-201ENST00000222482 ANO8Q9HCE9 1232 aaPredicted RBP11.49□□□□□ -0.57
CPA4-201ENST00000222482 RPRD2Q5VT52 1461 aaKnown RBP11.48□□□□□ -0.57
CPA4-201ENST00000222482 DAPK1P53355 1430 aa11.47□□□□□ -0.57
CPA4-201ENST00000222482 FAM69CQ0P6D2 419 aa11.47□□□□□ -0.57
CPA4-201ENST00000222482 ZNF777Q9ULD5 760 aaPredicted RBP11.47□□□□□ -0.57
CPA4-201ENST00000222482 ERICH6BQ5W0A0 696 aa11.46□□□□□ -0.57
CPA4-201ENST00000222482 SPATA31E1Q6ZUB1 1445 aa11.46□□□□□ -0.57
CPA4-201ENST00000222482 DEKP35659 375 aaKnown RBP11.46□□□□□ -0.58
CPA4-201ENST00000222482 ABCC5O15440 1437 aa11.46□□□□□ -0.58
CPA4-201ENST00000222482 SALL2Q9Y467 1007 aaPredicted RBP11.45□□□□□ -0.58
CPA4-201ENST00000222482 CCDC136Q96JN2 1154 aa11.45□□□□□ -0.58
CPA4-201ENST00000222482 IQGAP2Q13576 1575 aa11.45□□□□□ -0.58
CPA4-201ENST00000222482 BCORL1Q5H9F3 1711 aa11.45□□□□□ -0.58
CPA4-201ENST00000222482 NOP58Q9Y2X3 529 aaKnown RBP11.45□□□□□ -0.58
CPA4-201ENST00000222482 DHX29Q7Z478 1369 aaKnown RBP11.44□□□□□ -0.58
CPA4-201ENST00000222482 MIA2Q96PC5 1412 aa11.44□□□□□ -0.58
CPA4-201ENST00000222482 NUDCQ9Y266 331 aa11.43□□□□□ -0.58
CPA4-201ENST00000222482 USP47Q96K76 1375 aa11.43□□□□□ -0.58
CPA4-201ENST00000222482 POLR1AO95602 1720 aaPredicted RBP11.41□□□□□ -0.58
CPA4-201ENST00000222482 KDM2AQ9Y2K7 1162 aa11.41□□□□□ -0.58
CPA4-201ENST00000222482 PTPRGP23470 1445 aa11.41□□□□□ -0.58
CPA4-201ENST00000222482 SMG6Q86US8 1419 aaKnown RBP11.41□□□□□ -0.58
CPA4-201ENST00000222482 PKD2Q13563 968 aa11.4□□□□□ -0.58
CPA4-201ENST00000222482 CARMIL2Q6F5E8 1435 aa11.4□□□□□ -0.58
CPA4-201ENST00000222482 DNMT1P26358 1616 aaKnown RBP11.4□□□□□ -0.58
CPA4-201ENST00000222482 PZPP20742 1482 aa11.4□□□□□ -0.58
CPA4-201ENST00000222482 GLI2P10070 1586 aa11.4□□□□□ -0.58
CPA4-201ENST00000222482 UHRF1BP1LA0JNW5 1464 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms