RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 HAP1P54257 671 aaPredicted RBP14.32□□□□□ -0.12
VPS18-201ENST00000220509 DHX37Q8IY37 1157 aaKnown RBP14.31□□□□□ -0.12
VPS18-201ENST00000220509 EIF4G2P78344 907 aaKnown RBP eCLIP14.3□□□□□ -0.12
VPS18-201ENST00000220509 TAF7LQ5H9L4 462 aa14.3□□□□□ -0.12
VPS18-201ENST00000220509 PRDM2Q13029 1718 aa14.29□□□□□ -0.12
VPS18-201ENST00000220509 CASKIN1Q8WXD9 1431 aa14.29□□□□□ -0.12
VPS18-201ENST00000220509 DHX57Q6P158 1386 aaKnown RBP14.28□□□□□ -0.12
VPS18-201ENST00000220509 MSH5O43196 834 aa14.28□□□□□ -0.12
VPS18-201ENST00000220509 NPM1P06748 294 aaKnown RBP eCLIP14.28□□□□□ -0.12
VPS18-201ENST00000220509 PAXIP1Q6ZW49 1069 aaPredicted RBP14.27□□□□□ -0.12
VPS18-201ENST00000220509 NPM2Q86SE8 214 aaKnown RBP14.26□□□□□ -0.13
VPS18-201ENST00000220509 PCF11O94913 1555 aaKnown RBP14.25□□□□□ -0.13
VPS18-201ENST00000220509 HNRNPMP52272 730 aaKnown RBP eCLIP14.25□□□□□ -0.13
VPS18-201ENST00000220509 AAMPQ13685 434 aa14.25□□□□□ -0.13
VPS18-201ENST00000220509 B4GALNT3Q6L9W6 998 aa14.25□□□□□ -0.13
VPS18-201ENST00000220509 TIAM1Q13009 1591 aa14.24□□□□□ -0.13
VPS18-201ENST00000220509 RGL3Q3MIN7 710 aa14.23□□□□□ -0.13
VPS18-201ENST00000220509 CUL7Q14999 1698 aa14.23□□□□□ -0.13
VPS18-201ENST00000220509 PTPRGP23470 1445 aa14.23□□□□□ -0.13
VPS18-201ENST00000220509 MRS2Q9HD23 443 aa14.23□□□□□ -0.13
VPS18-201ENST00000220509 CHGAP10645 457 aaKnown RBP14.22□□□□□ -0.13
VPS18-201ENST00000220509 CDK13Q14004 1512 aaKnown RBP14.21□□□□□ -0.13
VPS18-201ENST00000220509 FGD6Q6ZV73 1430 aa14.21□□□□□ -0.13
VPS18-201ENST00000220509 FYCO1Q9BQS8 1478 aa14.21□□□□□ -0.13
VPS18-201ENST00000220509 NCOA2Q15596 1464 aa14.21□□□□□ -0.14
VPS18-201ENST00000220509 RRBP1Q9P2E9 1410 aaKnown RBP14.2□□□□□ -0.14
VPS18-201ENST00000220509 SENP3Q9H4L4 574 aaPredicted RBP14.19□□□□□ -0.14
VPS18-201ENST00000220509 GRIN2AQ12879 1464 aa14.19□□□□□ -0.14
VPS18-201ENST00000220509 EFCAB5A4FU69 1503 aa14.19□□□□□ -0.14
VPS18-201ENST00000220509 PRG4Q92954 1404 aaPredicted RBP14.18□□□□□ -0.14
VPS18-201ENST00000220509 IQGAP2Q13576 1575 aa14.18□□□□□ -0.14
VPS18-201ENST00000220509 KIAA0586Q9BVV6 1533 aa14.17□□□□□ -0.14
VPS18-201ENST00000220509 CCDC18Q5T9S5 1454 aa14.17□□□□□ -0.14
VPS18-201ENST00000220509 PLB1Q6P1J6 1458 aa14.16□□□□□ -0.14
VPS18-201ENST00000220509 CHMP4AQ9BY43 222 aa14.16□□□□□ -0.14
VPS18-201ENST00000220509 MYOM3Q5VTT5 1437 aa14.16□□□□□ -0.14
VPS18-201ENST00000220509 HOMEZQ8IX15 550 aa14.15□□□□□ -0.14
VPS18-201ENST00000220509 TMC1Q8TDI8 760 aa14.15□□□□□ -0.14
VPS18-201ENST00000220509 MPHOSPH9Q99550 1183 aa14.15□□□□□ -0.14
VPS18-201ENST00000220509 PPP1R15AO75807 674 aaPredicted RBP14.15□□□□□ -0.14
VPS18-201ENST00000220509 ANP32AP39687 249 aaKnown RBP14.14□□□□□ -0.15
VPS18-201ENST00000220509 SYNJ2O15056 1496 aa14.14□□□□□ -0.15
VPS18-201ENST00000220509 TARBP1Q13395 1621 aaKnown RBP14.12□□□□□ -0.15
VPS18-201ENST00000220509 ABCA5Q8WWZ7 1642 aa14.12□□□□□ -0.15
VPS18-201ENST00000220509 EPRSP07814 1512 aaKnown RBP14.12□□□□□ -0.15
VPS18-201ENST00000220509 PKD2Q13563 968 aa14.11□□□□□ -0.15
VPS18-201ENST00000220509 NAP1L5Q96NT1 182 aaPredicted RBP14.11□□□□□ -0.15
VPS18-201ENST00000220509 NOP58Q9Y2X3 529 aaKnown RBP14.11□□□□□ -0.15
VPS18-201ENST00000220509 CARD11Q9BXL7 1154 aa14.1□□□□□ -0.15
VPS18-201ENST00000220509 EIF4G3O43432 1585 aaKnown RBP14.09□□□□□ -0.15
VPS18-201ENST00000220509 HSPA5P11021 654 aaKnown RBP14.09□□□□□ -0.15
VPS18-201ENST00000220509 WDR62O43379 1518 aa14.09□□□□□ -0.15
VPS18-201ENST00000220509 ZBTB47Q9UFB7 747 aaPredicted RBP14.09□□□□□ -0.15
VPS18-201ENST00000220509 OSCARQ8IYS5 282 aa14.09□□□□□ -0.15
VPS18-201ENST00000220509 MAGI1Q96QZ7 1491 aaPredicted RBP14.08□□□□□ -0.15
VPS18-201ENST00000220509 C14orf37Q86TY3 774 aa14.08□□□□□ -0.16
VPS18-201ENST00000220509 CYB5RLQ6IPT4 315 aa14.08□□□□□ -0.16
VPS18-201ENST00000220509 CTTNBP2Q8WZ74 1663 aa14.07□□□□□ -0.16
VPS18-201ENST00000220509 LAS1LQ9Y4W2 734 aaKnown RBP14.07□□□□□ -0.16
VPS18-201ENST00000220509 ADAMTS12P58397 1594 aa14.07□□□□□ -0.16
VPS18-201ENST00000220509 L3MBTL2Q969R5 705 aa14.06□□□□□ -0.16
VPS18-201ENST00000220509 DCAF11Q8TEB1 546 aa14.05□□□□□ -0.16
VPS18-201ENST00000220509 NUP155O75694 1391 aa14.05□□□□□ -0.16
VPS18-201ENST00000220509 PPP4R2Q9NY27 417 aa14.05□□□□□ -0.16
VPS18-201ENST00000220509 PBRM1Q86U86 1689 aa14.04□□□□□ -0.16
VPS18-201ENST00000220509 PAK3O75914 559 aaPredicted RBP14.03□□□□□ -0.16
VPS18-201ENST00000220509 FANCIQ9NVI1 1328 aa14.03□□□□□ -0.16
VPS18-201ENST00000220509 EFCAB2Q5VUJ9 269 aa14.02□□□□□ -0.16
VPS18-201ENST00000220509 THOC2Q8NI27 1593 aaKnown RBP14.02□□□□□ -0.16
VPS18-201ENST00000220509 PTPRKQ15262 1439 aa14.02□□□□□ -0.17
VPS18-201ENST00000220509 HECW1Q76N89 1606 aa14.01□□□□□ -0.17
VPS18-201ENST00000220509 ANKRD30AQ9BXX3 1397 aa14.01□□□□□ -0.17
VPS18-201ENST00000220509 CCER2I3L3R5 266 aa14□□□□□ -0.17
VPS18-201ENST00000220509 BRD2P25440 801 aaKnown RBP14□□□□□ -0.17
VPS18-201ENST00000220509 EHBP1L1Q8N3D4 1523 aa14□□□□□ -0.17
VPS18-201ENST00000220509 TROQ12816 1431 aaPredicted RBP13.99□□□□□ -0.17
VPS18-201ENST00000220509 AFAP1Q8N556 730 aa13.98□□□□□ -0.17
VPS18-201ENST00000220509 MAP3K1Q13233 1512 aa13.98□□□□□ -0.17
VPS18-201ENST00000220509 SUPT6HQ7KZ85 1726 aaKnown RBP13.97□□□□□ -0.17
VPS18-201ENST00000220509 DISP1Q96F81 1524 aa13.97□□□□□ -0.17
VPS18-201ENST00000220509 STAG3Q9UJ98 1225 aa13.97□□□□□ -0.17
VPS18-201ENST00000220509 NUP153P49790 1475 aaKnown RBP13.97□□□□□ -0.17
VPS18-201ENST00000220509 GGT6Q6P531 493 aa13.96□□□□□ -0.17
VPS18-201ENST00000220509 ARHGEF11O15085 1522 aa13.96□□□□□ -0.17
VPS18-201ENST00000220509 RSPH6AQ9H0K4 717 aa13.96□□□□□ -0.17
VPS18-201ENST00000220509 NAIPQ13075 1403 aa13.95□□□□□ -0.18
VPS18-201ENST00000220509 NAP1L2Q9ULW6 460 aaPredicted RBP13.95□□□□□ -0.18
VPS18-201ENST00000220509 NEFMP07197 916 aa13.94□□□□□ -0.18
VPS18-201ENST00000220509 CANXP27824 592 aaKnown RBP13.94□□□□□ -0.18
VPS18-201ENST00000220509 WDR97A6NE52 1622 aa13.94□□□□□ -0.18
VPS18-201ENST00000220509 KIF3BO15066 747 aa13.94□□□□□ -0.18
VPS18-201ENST00000220509 CHMP4BQ9H444 224 aaKnown RBP13.94□□□□□ -0.18
VPS18-201ENST00000220509 UACAQ9BZF9 1416 aa13.93□□□□□ -0.18
VPS18-201ENST00000220509 HFM1A2PYH4 1435 aa13.93□□□□□ -0.18
VPS18-201ENST00000220509 SPAG9O60271 1321 aaKnown RBP13.92□□□□□ -0.18
VPS18-201ENST00000220509 CEP170Q5SW79 1584 aa13.92□□□□□ -0.18
VPS18-201ENST00000220509 UGGT2Q9NYU1 1516 aa13.92□□□□□ -0.18
VPS18-201ENST00000220509 KIAA0556O60303 1618 aa13.92□□□□□ -0.18
VPS18-201ENST00000220509 PTPN23Q9H3S7 1636 aa13.91□□□□□ -0.18
VPS18-201ENST00000220509 WDR43Q15061 677 aaKnown RBP eCLIP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms