RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 KIF14Q15058 1648 aa25.95■■□□□ 1.74
SLC22A4-201ENST00000200652 ITSN2Q9NZM3 1697 aa25.94■■□□□ 1.74
SLC22A4-201ENST00000200652 DENND4BO75064 1496 aaPredicted RBP25.94■■□□□ 1.74
SLC22A4-201ENST00000200652 TRIM52Q96A61 297 aa25.93■■□□□ 1.74
SLC22A4-201ENST00000200652 GPATCH8Q9UKJ3 1502 aaKnown RBP25.91■■□□□ 1.74
SLC22A4-201ENST00000200652 CAMSAP2Q08AD1 1489 aa25.89■■□□□ 1.73
SLC22A4-201ENST00000200652 CFDP1Q9UEE9 299 aaPredicted RBP25.88■■□□□ 1.73
SLC22A4-201ENST00000200652 CHD1O14646 1710 aa25.88■■□□□ 1.73
SLC22A4-201ENST00000200652 GTF3C3Q9Y5Q9 886 aa25.88■■□□□ 1.73
SLC22A4-201ENST00000200652 ATP10BO94823 1461 aa25.87■■□□□ 1.73
SLC22A4-201ENST00000200652 MPHOSPH9Q99550 1183 aa25.86■■□□□ 1.73
SLC22A4-201ENST00000200652 KDM5BQ9UGL1 1544 aa25.85■■□□□ 1.73
SLC22A4-201ENST00000200652 PLEKHD1A6NEE1 506 aa25.84■■□□□ 1.73
SLC22A4-201ENST00000200652 PTPRGP23470 1445 aa25.8■■□□□ 1.72
SLC22A4-201ENST00000200652 CDC42BPAQ5VT25 1732 aa25.79■■□□□ 1.72
SLC22A4-201ENST00000200652 ABCC10Q5T3U5 1492 aa25.79■■□□□ 1.72
SLC22A4-201ENST00000200652 ADGBQ8N7X0 1667 aa25.79■■□□□ 1.72
SLC22A4-201ENST00000200652 ZNF777Q9ULD5 760 aaPredicted RBP25.78■■□□□ 1.72
SLC22A4-201ENST00000200652 CROCC2H7BZ55 1655 aa25.78■■□□□ 1.72
SLC22A4-201ENST00000200652 HIRIP3Q9BW71 556 aaPredicted RBP25.78■■□□□ 1.72
SLC22A4-201ENST00000200652 DDX10Q13206 875 aaKnown RBP25.76■■□□□ 1.71
SLC22A4-201ENST00000200652 NCOA1Q15788 1441 aa25.75■■□□□ 1.71
SLC22A4-201ENST00000200652 SHROOM2Q13796 1616 aa25.75■■□□□ 1.71
SLC22A4-201ENST00000200652 ADGRL2O95490 1459 aa25.74■■□□□ 1.71
SLC22A4-201ENST00000200652 FOXD1Q16676 465 aa25.72■■□□□ 1.71
SLC22A4-201ENST00000200652 ANKRD30BQ9BXX2 1392 aa25.7■■□□□ 1.7
SLC22A4-201ENST00000200652 SLC4A1APQ9BWU0 796 aaKnown RBP25.67■■□□□ 1.7
SLC22A4-201ENST00000200652 ANKRD30AQ9BXX3 1397 aa25.66■■□□□ 1.7
SLC22A4-201ENST00000200652 PZPP20742 1482 aa25.65■■□□□ 1.7
SLC22A4-201ENST00000200652 RPRD2Q5VT52 1461 aaKnown RBP25.64■■□□□ 1.69
SLC22A4-201ENST00000200652 L3MBTL2Q969R5 705 aa25.63■■□□□ 1.69
SLC22A4-201ENST00000200652 SHANK2Q9UPX8 1470 aa25.62■■□□□ 1.69
SLC22A4-201ENST00000200652 ERCC6L2Q5T890 1561 aa25.61■■□□□ 1.69
SLC22A4-201ENST00000200652 C9orf84Q5VXU9 1444 aa25.58■■□□□ 1.69
SLC22A4-201ENST00000200652 KCNH8Q96L42 1107 aa25.58■■□□□ 1.69
SLC22A4-201ENST00000200652 ANKRD50Q9ULJ7 1429 aa25.57■■□□□ 1.68
SLC22A4-201ENST00000200652 CDC42BPBQ9Y5S2 1711 aa25.57■■□□□ 1.68
SLC22A4-201ENST00000200652 ARHGEF5Q12774 1597 aa25.56■■□□□ 1.68
SLC22A4-201ENST00000200652 PREX2Q70Z35 1606 aa25.56■■□□□ 1.68
SLC22A4-201ENST00000200652 TEX14Q8IWB6 1497 aa25.55■■□□□ 1.68
SLC22A4-201ENST00000200652 ABCC2Q92887 1545 aa25.54■■□□□ 1.68
SLC22A4-201ENST00000200652 MBD5Q9P267 1494 aa25.53■■□□□ 1.68
SLC22A4-201ENST00000200652 TSPY4P0CV99 314 aa25.53■■□□□ 1.68
SLC22A4-201ENST00000200652 TSPY10P0CW01 314 aa25.53■■□□□ 1.68
SLC22A4-201ENST00000200652 SAMD9LQ8IVG5 1584 aa25.53■■□□□ 1.68
SLC22A4-201ENST00000200652 HNRNPMP52272 730 aaKnown RBP eCLIP25.53■■□□□ 1.68
SLC22A4-201ENST00000200652 HSPA5P11021 654 aaKnown RBP25.52■■□□□ 1.68
SLC22A4-201ENST00000200652 KIAA1107Q9UPP5 1409 aa25.52■■□□□ 1.68
SLC22A4-201ENST00000200652 CLASP1Q7Z460 1538 aa25.52■■□□□ 1.68
SLC22A4-201ENST00000200652 EIF4G2P78344 907 aaKnown RBP eCLIP25.48■■□□□ 1.67
SLC22A4-201ENST00000200652 ANP32CO43423 234 aa25.48■■□□□ 1.67
SLC22A4-201ENST00000200652 TTC37Q6PGP7 1564 aa25.48■■□□□ 1.67
SLC22A4-201ENST00000200652 NBPF8Q3BBV2 869 aa25.47■■□□□ 1.67
SLC22A4-201ENST00000200652 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.47■■□□□ 1.67
SLC22A4-201ENST00000200652 PKD2Q13563 968 aa25.47■■□□□ 1.67
SLC22A4-201ENST00000200652 CCDC141Q6ZP82 1450 aa25.47■■□□□ 1.67
SLC22A4-201ENST00000200652 CCER2I3L3R5 266 aa25.45■■□□□ 1.66
SLC22A4-201ENST00000200652 KIF15Q9NS87 1388 aa25.45■■□□□ 1.66
SLC22A4-201ENST00000200652 RSPH4AQ5TD94 716 aa25.44■■□□□ 1.66
SLC22A4-201ENST00000200652 NUP155O75694 1391 aa25.43■■□□□ 1.66
SLC22A4-201ENST00000200652 KDM5DQ9BY66 1539 aa25.43■■□□□ 1.66
SLC22A4-201ENST00000200652 WASHC2AQ641Q2 1341 aa25.43■■□□□ 1.66
SLC22A4-201ENST00000200652 ARHGAP5Q13017 1502 aa25.41■■□□□ 1.66
SLC22A4-201ENST00000200652 MYO5CQ9NQX4 1742 aa25.4■■□□□ 1.66
SLC22A4-201ENST00000200652 SYCP2Q9BX26 1530 aa25.39■■□□□ 1.66
SLC22A4-201ENST00000200652 ZCCHC11Q5TAX3 1644 aaKnown RBP25.39■■□□□ 1.65
SLC22A4-201ENST00000200652 UHRF1BP1LA0JNW5 1464 aa25.38■■□□□ 1.65
SLC22A4-201ENST00000200652 MAST1Q9Y2H9 1570 aa25.36■■□□□ 1.65
SLC22A4-201ENST00000200652 SPATA31E1Q6ZUB1 1445 aa25.32■■□□□ 1.64
SLC22A4-201ENST00000200652 PLEKHH2Q8IVE3 1493 aa25.32■■□□□ 1.64
SLC22A4-201ENST00000200652 C11orf95C9JLR9 678 aaPredicted RBP25.31■■□□□ 1.64
SLC22A4-201ENST00000200652 CCDC7Q96M83 1385 aa25.29■■□□□ 1.64
SLC22A4-201ENST00000200652 PLCH2O75038 1416 aa25.28■■□□□ 1.64
SLC22A4-201ENST00000200652 FAM135AQ9P2D6 1515 aa25.26■■□□□ 1.63
SLC22A4-201ENST00000200652 CNTLNQ9NXG0 1405 aa25.26■■□□□ 1.63
SLC22A4-201ENST00000200652 ARHGEF12Q9NZN5 1544 aa25.26■■□□□ 1.63
SLC22A4-201ENST00000200652 POLR1AO95602 1720 aaPredicted RBP25.26■■□□□ 1.63
SLC22A4-201ENST00000200652 PLXNC1O60486 1568 aa25.25■■□□□ 1.63
SLC22A4-201ENST00000200652 UNC13BO14795 1591 aa25.23■■□□□ 1.63
SLC22A4-201ENST00000200652 UHRF1BP1Q6BDS2 1440 aa25.22■■□□□ 1.63
SLC22A4-201ENST00000200652 EFCAB2Q5VUJ9 269 aa25.21■■□□□ 1.63
SLC22A4-201ENST00000200652 ZNF326Q5BKZ1 582 aaKnown RBP25.2■■□□□ 1.62
SLC22A4-201ENST00000200652 KIF7Q2M1P5 1343 aa25.18■■□□□ 1.62
SLC22A4-201ENST00000200652 ABCC1P33527 1531 aa25.18■■□□□ 1.62
SLC22A4-201ENST00000200652 DUOX2Q9NRD8 1548 aa25.17■■□□□ 1.62
SLC22A4-201ENST00000200652 USP47Q96K76 1375 aa25.15■■□□□ 1.62
SLC22A4-201ENST00000200652 KDM5CP41229 1560 aa25.15■■□□□ 1.62
SLC22A4-201ENST00000200652 RALGAPBQ86X10 1494 aa25.15■■□□□ 1.62
SLC22A4-201ENST00000200652 SUPT16HQ9Y5B9 1047 aaKnown RBP25.14■■□□□ 1.61
SLC22A4-201ENST00000200652 IQGAP3Q86VI3 1631 aa25.14■■□□□ 1.61
SLC22A4-201ENST00000200652 ARAP3Q8WWN8 1544 aa25.12■■□□□ 1.61
SLC22A4-201ENST00000200652 TRAPPC8Q9Y2L5 1435 aa25.12■■□□□ 1.61
SLC22A4-201ENST00000200652 BCORL1Q5H9F3 1711 aa25.12■■□□□ 1.61
SLC22A4-201ENST00000200652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.12■■□□□ 1.61
SLC22A4-201ENST00000200652 ERBINQ96RT1 1412 aa25.11■■□□□ 1.61
SLC22A4-201ENST00000200652 PELP1Q8IZL8 1130 aaKnown RBP25.11■■□□□ 1.61
SLC22A4-201ENST00000200652 MAGI2Q86UL8 1455 aa25.09■■□□□ 1.61
SLC22A4-201ENST00000200652 WDR7Q9Y4E6 1490 aa25.09■■□□□ 1.61
SLC22A4-201ENST00000200652 DCAF11Q8TEB1 546 aa25.09■■□□□ 1.61
SLC22A4-201ENST00000200652 KDM2AQ9Y2K7 1162 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms