RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 TNNT2P45379 298 aaPredicted RBP17.41■□□□□ 0.38
HDAC7-201ENST00000080059 RSPH4AQ5TD94 716 aa17.41■□□□□ 0.38
HDAC7-201ENST00000080059 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.41■□□□□ 0.38
HDAC7-201ENST00000080059 GRIN2BQ13224 1484 aa17.4■□□□□ 0.38
HDAC7-201ENST00000080059 KANK1Q14678 1352 aa17.39■□□□□ 0.37
HDAC7-201ENST00000080059 NEUROD2Q15784 382 aa17.39■□□□□ 0.37
HDAC7-201ENST00000080059 ROCK2O75116 1388 aaKnown RBP17.38■□□□□ 0.37
HDAC7-201ENST00000080059 ARID4BQ4LE39 1312 aaPredicted RBP17.38■□□□□ 0.37
HDAC7-201ENST00000080059 SPAG9O60271 1321 aaKnown RBP17.37■□□□□ 0.37
HDAC7-201ENST00000080059 FYCO1Q9BQS8 1478 aa17.36■□□□□ 0.37
HDAC7-201ENST00000080059 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
HDAC7-201ENST00000080059 MLECQ14165 292 aa17.35■□□□□ 0.37
HDAC7-201ENST00000080059 B4GALNT3Q6L9W6 998 aa17.35■□□□□ 0.37
HDAC7-201ENST00000080059 ST20-MTHFSA0A0A6YYL1 179 aa17.34■□□□□ 0.37
HDAC7-201ENST00000080059 SAFB2Q14151 953 aaKnown RBP eCLIP17.34■□□□□ 0.37
HDAC7-201ENST00000080059 UACAQ9BZF9 1416 aa17.34■□□□□ 0.37
HDAC7-201ENST00000080059 PPM1GO15355 546 aaPredicted RBP17.33■□□□□ 0.36
HDAC7-201ENST00000080059 ABCA10Q8WWZ4 1543 aa17.32■□□□□ 0.36
HDAC7-201ENST00000080059 POGKQ9P215 609 aa17.32■□□□□ 0.36
HDAC7-201ENST00000080059 PPP4R2Q9NY27 417 aa17.32■□□□□ 0.36
HDAC7-201ENST00000080059 TIAM1Q13009 1591 aa17.31■□□□□ 0.36
HDAC7-201ENST00000080059 MRC2Q9UBG0 1479 aa17.31■□□□□ 0.36
HDAC7-201ENST00000080059 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
HDAC7-201ENST00000080059 CFAP53Q96M91 514 aa17.29■□□□□ 0.36
HDAC7-201ENST00000080059 EFCAB5A4FU69 1503 aa17.28■□□□□ 0.36
HDAC7-201ENST00000080059 PLEKHG5O94827 1062 aa17.26■□□□□ 0.35
HDAC7-201ENST00000080059 PRKRIP1Q9H875 184 aaPredicted RBP17.26■□□□□ 0.35
HDAC7-201ENST00000080059 STK26Q9P289 416 aa17.26■□□□□ 0.35
HDAC7-201ENST00000080059 CCDC144AA2RUR9 1427 aa17.24■□□□□ 0.35
HDAC7-201ENST00000080059 KTN1Q86UP2 1357 aaKnown RBP17.24■□□□□ 0.35
HDAC7-201ENST00000080059 IFT140Q96RY7 1462 aa17.24■□□□□ 0.35
HDAC7-201ENST00000080059 BIVM-ERCC5R4GMW8 1640 aa17.22■□□□□ 0.35
HDAC7-201ENST00000080059 KIF15Q9NS87 1388 aa17.22■□□□□ 0.35
HDAC7-201ENST00000080059 NUTM2DQ5VT03 806 aaPredicted RBP17.22■□□□□ 0.35
HDAC7-201ENST00000080059 PRG4Q92954 1404 aaPredicted RBP17.22■□□□□ 0.35
HDAC7-201ENST00000080059 SRPK2P78362 688 aaKnown RBP17.22■□□□□ 0.35
HDAC7-201ENST00000080059 SNAPC4Q5SXM2 1469 aa17.21■□□□□ 0.35
HDAC7-201ENST00000080059 LAMC3Q9Y6N6 1575 aa17.21■□□□□ 0.35
HDAC7-201ENST00000080059 ANKRD50Q9ULJ7 1429 aa17.21■□□□□ 0.35
HDAC7-201ENST00000080059 USP47Q96K76 1375 aa17.21■□□□□ 0.35
HDAC7-201ENST00000080059 NBR1Q14596 966 aa17.21■□□□□ 0.35
HDAC7-201ENST00000080059 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.35
HDAC7-201ENST00000080059 RALBP1Q15311 655 aa17.21■□□□□ 0.34
HDAC7-201ENST00000080059 U2SURPO15042 1029 aaKnown RBP17.2■□□□□ 0.34
HDAC7-201ENST00000080059 WASHC2CQ9Y4E1 1318 aa17.19■□□□□ 0.34
HDAC7-201ENST00000080059 C14orf37Q86TY3 774 aa17.19■□□□□ 0.34
HDAC7-201ENST00000080059 UPF2Q9HAU5 1272 aaKnown RBP17.18■□□□□ 0.34
HDAC7-201ENST00000080059 MORC1Q86VD1 984 aa17.18■□□□□ 0.34
HDAC7-201ENST00000080059 FRAT1Q92837 279 aaPredicted RBP17.17■□□□□ 0.34
HDAC7-201ENST00000080059 HFM1A2PYH4 1435 aa17.17■□□□□ 0.34
HDAC7-201ENST00000080059 PCF11O94913 1555 aaKnown RBP17.17■□□□□ 0.34
HDAC7-201ENST00000080059 NLRP13Q86W25 1043 aa17.16■□□□□ 0.34
HDAC7-201ENST00000080059 AFAP1Q8N556 730 aa17.16■□□□□ 0.34
HDAC7-201ENST00000080059 NUDCQ9Y266 331 aa17.16■□□□□ 0.34
HDAC7-201ENST00000080059 CYB5RLQ6IPT4 315 aa17.16■□□□□ 0.34
HDAC7-201ENST00000080059 OSCARQ8IYS5 282 aa17.16■□□□□ 0.34
HDAC7-201ENST00000080059 WASHC2AQ641Q2 1341 aa17.16■□□□□ 0.34
HDAC7-201ENST00000080059 CDK13Q14004 1512 aaKnown RBP17.16■□□□□ 0.34
HDAC7-201ENST00000080059 KIF7Q2M1P5 1343 aa17.14■□□□□ 0.33
HDAC7-201ENST00000080059 MAPK8IP3Q9UPT6 1336 aa17.14■□□□□ 0.33
HDAC7-201ENST00000080059 ZBTB7CA1YPR0 619 aa17.14■□□□□ 0.33
HDAC7-201ENST00000080059 PANK3Q9H999 370 aa17.14■□□□□ 0.33
HDAC7-201ENST00000080059 TRAK1Q9UPV9 953 aa17.14■□□□□ 0.33
HDAC7-201ENST00000080059 EHBP1L1Q8N3D4 1523 aa17.13■□□□□ 0.33
HDAC7-201ENST00000080059 LAS1LQ9Y4W2 734 aaKnown RBP17.13■□□□□ 0.33
HDAC7-201ENST00000080059 NBPF8Q3BBV2 869 aa17.13■□□□□ 0.33
HDAC7-201ENST00000080059 EPRSP07814 1512 aaKnown RBP17.13■□□□□ 0.33
HDAC7-201ENST00000080059 TROQ12816 1431 aaPredicted RBP17.12■□□□□ 0.33
HDAC7-201ENST00000080059 NAIPQ13075 1403 aa17.12■□□□□ 0.33
HDAC7-201ENST00000080059 MIA2Q96PC5 1412 aa17.12■□□□□ 0.33
HDAC7-201ENST00000080059 KIAA0586Q9BVV6 1533 aa17.12■□□□□ 0.33
HDAC7-201ENST00000080059 RGS3P49796 1198 aa17.11■□□□□ 0.33
HDAC7-201ENST00000080059 CCDC7Q96M83 1385 aa17.11■□□□□ 0.33
HDAC7-201ENST00000080059 RCAN3Q9UKA8 241 aa17.1■□□□□ 0.33
HDAC7-201ENST00000080059 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.09■□□□□ 0.333e-16■□□□□ 8.2
HDAC7-201ENST00000080059 ZNF608Q9ULD9 1512 aaPredicted RBP17.09■□□□□ 0.33
HDAC7-201ENST00000080059 RBM19Q9Y4C8 960 aaKnown RBP17.09■□□□□ 0.33
HDAC7-201ENST00000080059 SYNJ2O15056 1496 aa17.09■□□□□ 0.33
HDAC7-201ENST00000080059 TRHP20396 242 aaPredicted RBP17.08■□□□□ 0.33
HDAC7-201ENST00000080059 SOX12O15370 315 aa17.08■□□□□ 0.32
HDAC7-201ENST00000080059 HSP90AA1P07900 732 aaKnown RBP17.08■□□□□ 0.32
HDAC7-201ENST00000080059 IQGAP2Q13576 1575 aa17.07■□□□□ 0.32
HDAC7-201ENST00000080059 FTSJ3Q8IY81 847 aaKnown RBP17.07■□□□□ 0.32
HDAC7-201ENST00000080059 CUL7Q14999 1698 aa17.06■□□□□ 0.32
HDAC7-201ENST00000080059 WDR97A6NE52 1622 aa17.06■□□□□ 0.32
HDAC7-201ENST00000080059 MYBBP1AQ9BQG0 1328 aaKnown RBP17.05■□□□□ 0.32
HDAC7-201ENST00000080059 HECW1Q76N89 1606 aa17.05■□□□□ 0.32
HDAC7-201ENST00000080059 TSHZ2Q9NRE2 1034 aa17.05■□□□□ 0.32
HDAC7-201ENST00000080059 U2AF1L5P0DN76 240 aaPredicted RBP17.05■□□□□ 0.32
HDAC7-201ENST00000080059 U2AF1Q01081 240 aaKnown RBP eCLIP17.05■□□□□ 0.32
HDAC7-201ENST00000080059 PLB1Q6P1J6 1458 aa17.04■□□□□ 0.32
HDAC7-201ENST00000080059 CCDC146Q8IYE0 955 aa17.04■□□□□ 0.32
HDAC7-201ENST00000080059 MAP3K1Q13233 1512 aa17.04■□□□□ 0.32
HDAC7-201ENST00000080059 SUPT6HQ7KZ85 1726 aaKnown RBP17.04■□□□□ 0.32
HDAC7-201ENST00000080059 DAPK1P53355 1430 aa17.03■□□□□ 0.32
HDAC7-201ENST00000080059 EIF3AQ14152 1382 aaKnown RBP17.03■□□□□ 0.32
HDAC7-201ENST00000080059 C9orf84Q5VXU9 1444 aa17.02■□□□□ 0.31
HDAC7-201ENST00000080059 NBPF1Q3BBV0 1214 aa17.01■□□□□ 0.31
HDAC7-201ENST00000080059 ERICH6BQ5W0A0 696 aa17.01■□□□□ 0.31
HDAC7-201ENST00000080059 ARHGAP5Q13017 1502 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms