RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 IGF1RP08069 1367 aa15.04■□□□□ -0
PKP2-201ENST00000070846 NUTM2FA1L443 756 aa15.04■□□□□ -0
PKP2-201ENST00000070846 MYH16Q9H6N6 1097 aa15.03■□□□□ -0
PKP2-201ENST00000070846 SETD5Q9C0A6 1442 aa15.03■□□□□ -0
PKP2-201ENST00000070846 IRX6P78412 446 aaPredicted RBP15.03■□□□□ -0
PKP2-201ENST00000070846 NPHP1O15259 732 aa15.03■□□□□ -0
PKP2-201ENST00000070846 CCDC18Q5T9S5 1454 aa15.01□□□□□ -0.01
PKP2-201ENST00000070846 UPF2Q9HAU5 1272 aaKnown RBP15.01□□□□□ -0.01
PKP2-201ENST00000070846 NESP48681 1621 aa15□□□□□ -0.01
PKP2-201ENST00000070846 AEBP2Q6ZN18 517 aaPredicted RBP14.99□□□□□ -0.01
PKP2-201ENST00000070846 MORC1Q86VD1 984 aa14.98□□□□□ -0.01
PKP2-201ENST00000070846 ANP32AP39687 249 aaKnown RBP14.98□□□□□ -0.01
PKP2-201ENST00000070846 CSB-PGBD3P0DP91 1061 aa14.97□□□□□ -0.01
PKP2-201ENST00000070846 HDGFL2Q7Z4V5 671 aaPredicted RBP14.97□□□□□ -0.01
PKP2-201ENST00000070846 CCDC9Q9Y3X0 531 aaKnown RBP14.95□□□□□ -0.02
PKP2-201ENST00000070846 RAB3GAP2Q9H2M9 1393 aa14.95□□□□□ -0.02
PKP2-201ENST00000070846 NGDNQ8NEJ9 315 aaKnown RBP14.94□□□□□ -0.02
PKP2-201ENST00000070846 TIMELESSQ9UNS1 1208 aa14.94□□□□□ -0.02
PKP2-201ENST00000070846 TRAK1Q9UPV9 953 aa14.93□□□□□ -0.02
PKP2-201ENST00000070846 HSPA5P11021 654 aaKnown RBP14.92□□□□□ -0.02
PKP2-201ENST00000070846 L3MBTL2Q969R5 705 aa14.91□□□□□ -0.02
PKP2-201ENST00000070846 FTSJ3Q8IY81 847 aaKnown RBP14.9□□□□□ -0.02
PKP2-201ENST00000070846 ROCK2O75116 1388 aaKnown RBP14.9□□□□□ -0.02
PKP2-201ENST00000070846 FRAT1Q92837 279 aaPredicted RBP14.9□□□□□ -0.02
PKP2-201ENST00000070846 ZNF644Q9H582 1327 aaPredicted RBP14.88□□□□□ -0.03
PKP2-201ENST00000070846 CC2D2AQ9P2K1 1620 aa14.87□□□□□ -0.03
PKP2-201ENST00000070846 AFAP1Q8N556 730 aa14.87□□□□□ -0.03
PKP2-201ENST00000070846 PNNQ9H307 717 aaKnown RBP14.87□□□□□ -0.03
PKP2-201ENST00000070846 GRIN2BQ13224 1484 aa14.86□□□□□ -0.03
PKP2-201ENST00000070846 RTF1Q92541 710 aaKnown RBP14.85□□□□□ -0.03
PKP2-201ENST00000070846 U2AF1L5P0DN76 240 aaPredicted RBP14.85□□□□□ -0.03
PKP2-201ENST00000070846 U2AF1Q01081 240 aaKnown RBP eCLIP14.85□□□□□ -0.03
PKP2-201ENST00000070846 ZNF330Q9Y3S2 320 aaPredicted RBP14.85□□□□□ -0.03
PKP2-201ENST00000070846 CFTRP13569 1480 aa14.85□□□□□ -0.03
PKP2-201ENST00000070846 VGFO15240 615 aaPredicted RBP14.84□□□□□ -0.03
PKP2-201ENST00000070846 TERF2IPQ9NYB0 399 aa14.84□□□□□ -0.03
PKP2-201ENST00000070846 LTV1Q96GA3 475 aaPredicted RBP14.83□□□□□ -0.04
PKP2-201ENST00000070846 PRG4Q92954 1404 aaPredicted RBP14.82□□□□□ -0.04
PKP2-201ENST00000070846 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.82□□□□□ -0.04
PKP2-201ENST00000070846 MRC2Q9UBG0 1479 aa14.81□□□□□ -0.04
PKP2-201ENST00000070846 CCDC144AA2RUR9 1427 aa14.79□□□□□ -0.04
PKP2-201ENST00000070846 AMPHP49418 695 aa14.78□□□□□ -0.04
PKP2-201ENST00000070846 SUPT16HQ9Y5B9 1047 aaKnown RBP14.78□□□□□ -0.04
PKP2-201ENST00000070846 OS9Q13438 667 aaPredicted RBP14.78□□□□□ -0.04
PKP2-201ENST00000070846 MINK1Q8N4C8 1332 aaPredicted RBP14.76□□□□□ -0.05
PKP2-201ENST00000070846 EIF3AQ14152 1382 aaKnown RBP14.75□□□□□ -0.05
PKP2-201ENST00000070846 ST20-MTHFSA0A0A6YYL1 179 aa14.75□□□□□ -0.05
PKP2-201ENST00000070846 KTN1Q86UP2 1357 aaKnown RBP14.74□□□□□ -0.05
PKP2-201ENST00000070846 IFT140Q96RY7 1462 aa14.74□□□□□ -0.05
PKP2-201ENST00000070846 GOLGA2Q08379 1002 aa14.73□□□□□ -0.05
PKP2-201ENST00000070846 RAPGEF3O95398 923 aa14.73□□□□□ -0.05
PKP2-201ENST00000070846 KIF15Q9NS87 1388 aa14.72□□□□□ -0.05
PKP2-201ENST00000070846 TOPBP1Q92547 1522 aa14.71□□□□□ -0.05
PKP2-201ENST00000070846 MYOM3Q5VTT5 1437 aa14.7□□□□□ -0.06
PKP2-201ENST00000070846 POLA1P09884 1462 aaPredicted RBP14.7□□□□□ -0.06
PKP2-201ENST00000070846 RGS3P49796 1198 aa14.69□□□□□ -0.06
PKP2-201ENST00000070846 MS4A1P11836 297 aa14.67□□□□□ -0.06
PKP2-201ENST00000070846 EVA1CP58658 441 aa14.67□□□□□ -0.06
PKP2-201ENST00000070846 CHMP4BQ9H444 224 aaKnown RBP14.67□□□□□ -0.06
PKP2-201ENST00000070846 PSME1Q06323 249 aa14.66□□□□□ -0.06
PKP2-201ENST00000070846 SNAPC4Q5SXM2 1469 aa14.66□□□□□ -0.06
PKP2-201ENST00000070846 SYNJ2O15056 1496 aa14.66□□□□□ -0.06
PKP2-201ENST00000070846 TAOK2Q9UL54 1235 aa14.66□□□□□ -0.06
PKP2-201ENST00000070846 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.65□□□□□ -0.06
PKP2-201ENST00000070846 ATF3P18847 181 aa14.65□□□□□ -0.06
PKP2-201ENST00000070846 TXNDC2Q86VQ3 553 aa14.65□□□□□ -0.06
PKP2-201ENST00000070846 UACAQ9BZF9 1416 aa14.65□□□□□ -0.06
PKP2-201ENST00000070846 EVC2Q86UK5 1308 aa14.65□□□□□ -0.06
PKP2-201ENST00000070846 HMGXB3Q12766 1538 aa14.64□□□□□ -0.07
PKP2-201ENST00000070846 RALBP1Q15311 655 aa14.64□□□□□ -0.07
PKP2-201ENST00000070846 COG3Q96JB2 828 aa14.64□□□□□ -0.07
PKP2-201ENST00000070846 PRKCSHP14314 528 aaPredicted RBP14.63□□□□□ -0.07
PKP2-201ENST00000070846 APBB1O00213 710 aa14.63□□□□□ -0.07
PKP2-201ENST00000070846 CALD1Q05682 793 aaKnown RBP14.63□□□□□ -0.07
PKP2-201ENST00000070846 TMEM132EQ6IEE7 984 aa14.63□□□□□ -0.07
PKP2-201ENST00000070846 ANP32BQ92688 251 aaKnown RBP14.63□□□□□ -0.07
PKP2-201ENST00000070846 PANK3Q9H999 370 aa14.63□□□□□ -0.07
PKP2-201ENST00000070846 SCAPERQ9BY12 1400 aa14.62□□□□□ -0.07
PKP2-201ENST00000070846 KCNJ4P48050 445 aa14.61□□□□□ -0.07
PKP2-201ENST00000070846 CASC1Q6TDU7 716 aa14.61□□□□□ -0.07
PKP2-201ENST00000070846 PRDM2Q13029 1718 aa14.61□□□□□ -0.07
PKP2-201ENST00000070846 STK31Q9BXU1 1019 aa14.61□□□□□ -0.07
PKP2-201ENST00000070846 ANKRD50Q9ULJ7 1429 aa14.61□□□□□ -0.07
PKP2-201ENST00000070846 CCDC146Q8IYE0 955 aa14.61□□□□□ -0.07
PKP2-201ENST00000070846 FGD6Q6ZV73 1430 aa14.6□□□□□ -0.07
PKP2-201ENST00000070846 PHLDB1Q86UU1 1377 aa14.6□□□□□ -0.07
PKP2-201ENST00000070846 FGD1P98174 961 aa14.6□□□□□ -0.07
PKP2-201ENST00000070846 GTF2E1P29083 439 aaPredicted RBP14.59□□□□□ -0.07
PKP2-201ENST00000070846 NLRP13Q86W25 1043 aa14.59□□□□□ -0.07
PKP2-201ENST00000070846 PROSER2Q86WR7 435 aaPredicted RBP14.58□□□□□ -0.07
PKP2-201ENST00000070846 ARHGAP5Q13017 1502 aa14.58□□□□□ -0.07
PKP2-201ENST00000070846 MEX3CQ5U5Q3 659 aaKnown RBP14.58□□□□□ -0.08
PKP2-201ENST00000070846 IPO8O15397 1037 aaKnown RBP14.58□□□□□ -0.08
PKP2-201ENST00000070846 CHMP4AQ9BY43 222 aa14.57□□□□□ -0.08
PKP2-201ENST00000070846 CCER2I3L3R5 266 aa14.56□□□□□ -0.08
PKP2-201ENST00000070846 THEMISQ8N1K5 641 aaPredicted RBP14.56□□□□□ -0.08
PKP2-201ENST00000070846 CGNL1Q0VF96 1302 aa14.56□□□□□ -0.08
PKP2-201ENST00000070846 BICRAQ9NZM4 1560 aa14.56□□□□□ -0.08
PKP2-201ENST00000070846 NUTM2GQ5VZR2 741 aa14.56□□□□□ -0.08
PKP2-201ENST00000070846 SYTL4Q96C24 671 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms