RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 SCAPERQ9BY12 1400 aa31.28■■■□□ 2.6
TRAPPC6A-201ENST00000006275 CDK13Q14004 1512 aaKnown RBP31.26■■■□□ 2.59
TRAPPC6A-201ENST00000006275 FER1L4A9Z1Z3 1794 aa31.25■■■□□ 2.59
TRAPPC6A-201ENST00000006275 PLCH2O75038 1416 aa31.24■■■□□ 2.59
TRAPPC6A-201ENST00000006275 ATP10AO60312 1499 aa31.19■■■□□ 2.58
TRAPPC6A-201ENST00000006275 C9orf84Q5VXU9 1444 aa31.17■■■□□ 2.58
TRAPPC6A-201ENST00000006275 ARHGEF12Q9NZN5 1544 aa31.17■■■□□ 2.58
TRAPPC6A-201ENST00000006275 EFCAB2Q5VUJ9 269 aa31.16■■■□□ 2.58
TRAPPC6A-201ENST00000006275 ATP1B4Q9UN42 357 aaPredicted RBP31.15■■■□□ 2.58
TRAPPC6A-201ENST00000006275 CEBPAP49715 358 aaPredicted RBP31.12■■■□□ 2.57
TRAPPC6A-201ENST00000006275 PREX1Q8TCU6 1659 aa31.09■■■□□ 2.57
TRAPPC6A-201ENST00000006275 CDK11AQ9UQ88 783 aaPredicted RBP31.08■■■□□ 2.57
TRAPPC6A-201ENST00000006275 MYO5CQ9NQX4 1742 aa31.07■■■□□ 2.56
TRAPPC6A-201ENST00000006275 FMN1Q68DA7 1419 aa31.06■■■□□ 2.56
TRAPPC6A-201ENST00000006275 DMRT2Q9Y5R5 561 aa31.05■■■□□ 2.56
TRAPPC6A-201ENST00000006275 ZNF518AQ6AHZ1 1483 aa31.05■■■□□ 2.56
TRAPPC6A-201ENST00000006275 MYT1LQ9UL68 1186 aa31.04■■■□□ 2.56
TRAPPC6A-201ENST00000006275 AFAP1Q8N556 730 aa31.02■■■□□ 2.56
TRAPPC6A-201ENST00000006275 UHRF1BP1Q6BDS2 1440 aa31.01■■■□□ 2.55
TRAPPC6A-201ENST00000006275 EHMT2Q96KQ7 1210 aa31.01■■■□□ 2.55
TRAPPC6A-201ENST00000006275 ARHGAP5Q13017 1502 aa31■■■□□ 2.55
TRAPPC6A-201ENST00000006275 UBTFP17480 764 aaKnown RBP31■■■□□ 2.55
TRAPPC6A-201ENST00000006275 KIF14Q15058 1648 aa30.99■■■□□ 2.55
TRAPPC6A-201ENST00000006275 DISP3Q9P2K9 1392 aa30.97■■■□□ 2.55
TRAPPC6A-201ENST00000006275 TROQ12816 1431 aaPredicted RBP30.97■■■□□ 2.55
TRAPPC6A-201ENST00000006275 KDM5CP41229 1560 aa30.96■■■□□ 2.55
TRAPPC6A-201ENST00000006275 CLIP1P30622 1438 aa30.95■■■□□ 2.54
TRAPPC6A-201ENST00000006275 STRCQ7RTU9 1775 aa30.94■■■□□ 2.54
TRAPPC6A-201ENST00000006275 ARHGAP35Q9NRY4 1499 aa30.94■■■□□ 2.54
TRAPPC6A-201ENST00000006275 DIP2CQ9Y2E4 1556 aa30.92■■■□□ 2.54
TRAPPC6A-201ENST00000006275 SETD1BQ9UPS6 1966 aaKnown RBP30.91■■■□□ 2.54
TRAPPC6A-201ENST00000006275 ESF1Q9H501 851 aaKnown RBP30.89■■■□□ 2.54
TRAPPC6A-201ENST00000006275 ILDR2Q71H61 639 aa30.88■■■□□ 2.53
TRAPPC6A-201ENST00000006275 REREQ9P2R6 1566 aa30.87■■■□□ 2.53
TRAPPC6A-201ENST00000006275 MLH3Q9UHC1 1453 aa30.85■■■□□ 2.53
TRAPPC6A-201ENST00000006275 PTPRTO14522 1441 aa30.85■■■□□ 2.53
TRAPPC6A-201ENST00000006275 ABCA6Q8N139 1617 aa30.84■■■□□ 2.53
TRAPPC6A-201ENST00000006275 C3P01024 1663 aa30.81■■■□□ 2.52
TRAPPC6A-201ENST00000006275 AGLP35573 1532 aa30.8■■■□□ 2.52
TRAPPC6A-201ENST00000006275 TRAPPC8Q9Y2L5 1435 aa30.8■■■□□ 2.52
TRAPPC6A-201ENST00000006275 SOCS7O14512 581 aa30.79■■■□□ 2.52
TRAPPC6A-201ENST00000006275 CDC42BPBQ9Y5S2 1711 aa30.78■■■□□ 2.52
TRAPPC6A-201ENST00000006275 ABCC1P33527 1531 aa30.77■■■□□ 2.52
TRAPPC6A-201ENST00000006275 LRRIQ1Q96JM4 1722 aa30.74■■■□□ 2.51
TRAPPC6A-201ENST00000006275 CNTLNQ9NXG0 1405 aa30.73■■■□□ 2.51
TRAPPC6A-201ENST00000006275 PREX2Q70Z35 1606 aa30.73■■■□□ 2.51
TRAPPC6A-201ENST00000006275 NCOA1Q15788 1441 aa30.71■■■□□ 2.51
TRAPPC6A-201ENST00000006275 SPATA31D1Q6ZQQ2 1576 aa30.71■■■□□ 2.51
TRAPPC6A-201ENST00000006275 LTBP4Q8N2S1 1624 aa30.7■■■□□ 2.51
TRAPPC6A-201ENST00000006275 ITSN2Q9NZM3 1697 aa30.7■■■□□ 2.5
TRAPPC6A-201ENST00000006275 CCDC18Q5T9S5 1454 aa30.67■■■□□ 2.5
TRAPPC6A-201ENST00000006275 KIDINS220Q9ULH0 1771 aa30.66■■■□□ 2.5
TRAPPC6A-201ENST00000006275 IQSEC2Q5JU85 1478 aa30.65■■■□□ 2.5
TRAPPC6A-201ENST00000006275 CASKIN1Q8WXD9 1431 aa30.64■■■□□ 2.5
TRAPPC6A-201ENST00000006275 NPATQ14207 1427 aa30.62■■■□□ 2.49
TRAPPC6A-201ENST00000006275 ZNF777Q9ULD5 760 aaPredicted RBP30.61■■■□□ 2.49
TRAPPC6A-201ENST00000006275 CAMSAP1Q5T5Y3 1602 aa30.6■■■□□ 2.49
TRAPPC6A-201ENST00000006275 ZMYM3Q14202 1370 aa30.58■■■□□ 2.49
TRAPPC6A-201ENST00000006275 SAMD9LQ8IVG5 1584 aa30.58■■■□□ 2.49
TRAPPC6A-201ENST00000006275 SPAG9O60271 1321 aaKnown RBP30.57■■■□□ 2.48
TRAPPC6A-201ENST00000006275 CDC42BPAQ5VT25 1732 aa30.57■■■□□ 2.48
TRAPPC6A-201ENST00000006275 MROH2AA6NES4 1674 aa30.55■■■□□ 2.48
TRAPPC6A-201ENST00000006275 NCKAP5LQ9HCH0 1330 aa30.54■■■□□ 2.48
TRAPPC6A-201ENST00000006275 SYCP2Q9BX26 1530 aa30.53■■■□□ 2.48
TRAPPC6A-201ENST00000006275 ZNF335Q9H4Z2 1342 aaPredicted RBP30.51■■■□□ 2.48
TRAPPC6A-201ENST00000006275 HNRNPMP52272 730 aaKnown RBP eCLIP30.51■■■□□ 2.47
TRAPPC6A-201ENST00000006275 UBAP1LF5GYI3 381 aa30.49■■■□□ 2.47
TRAPPC6A-201ENST00000006275 SUPT6HQ7KZ85 1726 aaKnown RBP30.48■■■□□ 2.47
TRAPPC6A-201ENST00000006275 FYCO1Q9BQS8 1478 aa30.48■■■□□ 2.47
TRAPPC6A-201ENST00000006275 GPATCH8Q9UKJ3 1502 aaKnown RBP30.47■■■□□ 2.47
TRAPPC6A-201ENST00000006275 PKD2Q13563 968 aa30.46■■■□□ 2.47
TRAPPC6A-201ENST00000006275 ATP7AQ04656 1500 aa30.46■■■□□ 2.47
TRAPPC6A-201ENST00000006275 A2MP01023 1474 aa30.44■■■□□ 2.46
TRAPPC6A-201ENST00000006275 PLA2R1Q13018 1463 aa30.44■■■□□ 2.46
TRAPPC6A-201ENST00000006275 CLTCQ00610 1675 aaKnown RBP30.43■■■□□ 2.46
TRAPPC6A-201ENST00000006275 KIAA1107Q9UPP5 1409 aa30.42■■■□□ 2.46
TRAPPC6A-201ENST00000006275 GGT6Q6P531 493 aa30.42■■■□□ 2.46
TRAPPC6A-201ENST00000006275 CFDP1Q9UEE9 299 aaPredicted RBP30.42■■■□□ 2.46
TRAPPC6A-201ENST00000006275 MYO3AQ8NEV4 1616 aa30.42■■■□□ 2.46
TRAPPC6A-201ENST00000006275 PTPRKQ15262 1439 aa30.41■■■□□ 2.46
TRAPPC6A-201ENST00000006275 PLEKHH2Q8IVE3 1493 aa30.41■■■□□ 2.46
TRAPPC6A-201ENST00000006275 PLXNC1O60486 1568 aa30.41■■■□□ 2.46
TRAPPC6A-201ENST00000006275 ZNF142P52746 1687 aaPredicted RBP30.4■■■□□ 2.46
TRAPPC6A-201ENST00000006275 CEP170BQ9Y4F5 1589 aaPredicted RBP30.4■■■□□ 2.46
TRAPPC6A-201ENST00000006275 INO80Q9ULG1 1556 aaPredicted RBP30.39■■■□□ 2.46
TRAPPC6A-201ENST00000006275 TCOF1Q13428 1488 aaKnown RBP30.38■■■□□ 2.45
TRAPPC6A-201ENST00000006275 CCNB3Q8WWL7 1395 aa30.38■■■□□ 2.45
TRAPPC6A-201ENST00000006275 PPP6R1Q9UPN7 881 aa30.35■■■□□ 2.45
TRAPPC6A-201ENST00000006275 LOC105371045A0A1W2PR82 267 aa30.3■■■□□ 2.44
TRAPPC6A-201ENST00000006275 MTUS2Q5JR59 1369 aa30.28■■■□□ 2.44
TRAPPC6A-201ENST00000006275 A2ML1A8K2U0 1454 aa30.27■■■□□ 2.44
TRAPPC6A-201ENST00000006275 SCAF1Q9H7N4 1312 aaKnown RBP30.24■■■□□ 2.43
TRAPPC6A-201ENST00000006275 ADGBQ8N7X0 1667 aa30.24■■■□□ 2.43
TRAPPC6A-201ENST00000006275 ZNF644Q9H582 1327 aaPredicted RBP30.23■■■□□ 2.43
TRAPPC6A-201ENST00000006275 CEP162Q5TB80 1403 aa30.23■■■□□ 2.43
TRAPPC6A-201ENST00000006275 DNMT1P26358 1616 aaKnown RBP30.21■■■□□ 2.43
TRAPPC6A-201ENST00000006275 PIP4K2BP78356 416 aa30.19■■■□□ 2.42
TRAPPC6A-201ENST00000006275 HSPA1LP34931 641 aa30.18■■■□□ 2.42
TRAPPC6A-201ENST00000006275 TNRQ92752 1358 aa30.17■■■□□ 2.42
TRAPPC6A-201ENST00000006275 MBD5Q9P267 1494 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms