RNA–Protein interactions for RNA: ENSMUST00000217537.1

Gtf3c6-206, Transcript of General transcription factor 3C polypeptide 6, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c6, Length 2,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6-206ENSMUST00000217537 Ythdc2B2RR83 1445 aaKnown RBP15.4■□□□□ 0.06
Gtf3c6-206ENSMUST00000217537 Fkbp15Q6P9Q6 1216 aaKnown RBP15.4■□□□□ 0.06
Gtf3c6-206ENSMUST00000217537 NclP09405 707 aaKnown RBP15.4■□□□□ 0.06
Gtf3c6-206ENSMUST00000217537 Gcc2Q8CHG3 1679 aa15.39■□□□□ 0.05
Gtf3c6-206ENSMUST00000217537 PtprtQ99M80 1454 aa15.39■□□□□ 0.05
Gtf3c6-206ENSMUST00000217537 Mia2Q91ZV0 1396 aa15.38■□□□□ 0.05
Gtf3c6-206ENSMUST00000217537 Cdc42bpaQ3UU96 1719 aa15.38■□□□□ 0.05
Gtf3c6-206ENSMUST00000217537 NexmifQ5DTT1 1515 aa15.38■□□□□ 0.05
Gtf3c6-206ENSMUST00000217537 Vps8Q0P5W1 1427 aa15.37■□□□□ 0.05
Gtf3c6-206ENSMUST00000217537 SafbD3YXK2 937 aaKnown RBP15.37■□□□□ 0.05
Gtf3c6-206ENSMUST00000217537 Mug1P28665 1476 aa15.36■□□□□ 0.05
Gtf3c6-206ENSMUST00000217537 Ncoa3O09000 1398 aa15.36■□□□□ 0.05
Gtf3c6-206ENSMUST00000217537 Ccer2J3QPU5 274 aa15.35■□□□□ 0.05
Gtf3c6-206ENSMUST00000217537 Prex2Q3LAC4 1598 aa15.35■□□□□ 0.05
Gtf3c6-206ENSMUST00000217537 Magi1Q6RHR9 1471 aa15.35■□□□□ 0.05
Gtf3c6-206ENSMUST00000217537 Hspa5P20029 655 aaKnown RBP15.35■□□□□ 0.05
Gtf3c6-206ENSMUST00000217537 Znf710Q3U288 666 aa15.35■□□□□ 0.05
Gtf3c6-206ENSMUST00000217537 NhsB1AV60 1647 aa15.34■□□□□ 0.05
Gtf3c6-206ENSMUST00000217537 Gm13697A2AK42 830 aa15.34■□□□□ 0.05
Gtf3c6-206ENSMUST00000217537 Naip2Q9QUK4 1447 aa15.33■□□□□ 0.04
Gtf3c6-206ENSMUST00000217537 Col17a1Q07563 1470 aa15.32■□□□□ 0.04
Gtf3c6-206ENSMUST00000217537 Lmtk2Q3TYD6 1471 aa15.32■□□□□ 0.04
Gtf3c6-206ENSMUST00000217537 Kiaa1551Q5DTW7 1521 aa15.31■□□□□ 0.04
Gtf3c6-206ENSMUST00000217537 Fancd2Q80V62 1450 aa15.3■□□□□ 0.04
Gtf3c6-206ENSMUST00000217537 Stra8P70278 393 aa15.29■□□□□ 0.04
Gtf3c6-206ENSMUST00000217537 Camsap2Q8C1B1 1461 aa15.29■□□□□ 0.04
Gtf3c6-206ENSMUST00000217537 Adgrl3Q80TS3 1537 aa15.28■□□□□ 0.04
Gtf3c6-206ENSMUST00000217537 Ccnb3Q810T2 1396 aa15.27■□□□□ 0.04
Gtf3c6-206ENSMUST00000217537 AI481877A2ALV5 1481 aa15.27■□□□□ 0.04
Gtf3c6-206ENSMUST00000217537 Dhx57Q6P5D3 1388 aaKnown RBP15.27■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 Kiaa1210E9Q0C6 1637 aa15.27■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 A2mQ6GQT1 1474 aa15.25■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 Ifnlr1Q8CGK5 535 aa15.25■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 Znf608Q56A10 1511 aa15.25■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 Mapkbp1Q6NS57 1503 aa15.25■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 Fam71e1A1L3C1 212 aa15.23■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 Gm156Q58A37 223 aa15.23■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 Dennd4bQ3U1Y4 1499 aa15.23■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 Lrrc9Q8CDN9 1456 aa15.23■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 Ak9G3UYQ4 1894 aa15.23■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 Fam208aQ69ZR9 1610 aaKnown RBP15.23■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 Naip5Q9R016 1403 aa15.23■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 Adcy10Q8C0T9 1614 aa15.22■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 Wdr7Q920I9 1489 aa15.22■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 Fam163aQ8CAA5 168 aa15.21■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 Abca8bQ8K440 1620 aa15.21■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 Atp10dQ8K2X1 1416 aa15.21■□□□□ 0.03
Gtf3c6-206ENSMUST00000217537 Igf1rQ60751 1373 aa15.19■□□□□ 0.02
Gtf3c6-206ENSMUST00000217537 Setbp1Q9Z180 1582 aa15.19■□□□□ 0.02
Gtf3c6-206ENSMUST00000217537 Fhod3Q76LL6 1578 aa15.18■□□□□ 0.02
Gtf3c6-206ENSMUST00000217537 Arhgef40Q3UPH7 1517 aa15.18■□□□□ 0.02
Gtf3c6-206ENSMUST00000217537 Smg6P61406 1418 aaKnown RBP15.17■□□□□ 0.02
Gtf3c6-206ENSMUST00000217537 Pprc1Q6NZN1 1644 aa15.17■□□□□ 0.02
Gtf3c6-206ENSMUST00000217537 Kdm6bQ5NCY0 1641 aa15.16■□□□□ 0.02
Gtf3c6-206ENSMUST00000217537 Sin3aQ60520 1274 aaKnown RBP15.16■□□□□ 0.02
Gtf3c6-206ENSMUST00000217537 Rnf17Q99MV7 1640 aa15.15■□□□□ 0.02
Gtf3c6-206ENSMUST00000217537 Chic2Q9D9G3 165 aa15.12■□□□□ 0.01
Gtf3c6-206ENSMUST00000217537 Arhgap5P97393 1501 aa15.12■□□□□ 0.01
Gtf3c6-206ENSMUST00000217537 Arid3cA6PWV5 409 aa15.12■□□□□ 0.01
Gtf3c6-206ENSMUST00000217537 Anp32aO35381 247 aa15.11■□□□□ 0.01
Gtf3c6-206ENSMUST00000217537 Mlh3A0A1Y7VMP7 1443 aa15.1■□□□□ 0.01
Gtf3c6-206ENSMUST00000217537 Ube2uB1AUC4 352 aa15.1■□□□□ 0.01
Gtf3c6-206ENSMUST00000217537 Gm32742A0A1B0GT42 1604 aa15.09■□□□□ 0.01
Gtf3c6-206ENSMUST00000217537 Calr4Q3TQS0 420 aa15.08■□□□□ 0.01
Gtf3c6-206ENSMUST00000217537 Caskin1Q6P9K8 1431 aa15.08■□□□□ 0
Gtf3c6-206ENSMUST00000217537 Tdrd9Q14BI7 1383 aa15.08■□□□□ 0
Gtf3c6-206ENSMUST00000217537 Plekhh2Q8C115 1491 aa15.06■□□□□ 0
Gtf3c6-206ENSMUST00000217537 Ttbk1Q6PCN3 1308 aa15.06■□□□□ 0
Gtf3c6-206ENSMUST00000217537 Zfyve16Q80U44 1528 aa15.05■□□□□ 0
Gtf3c6-206ENSMUST00000217537 Pdcd11Q6NS46 1862 aaKnown RBP15.05■□□□□ -0
Gtf3c6-206ENSMUST00000217537 Abcc5Q9R1X5 1436 aa15.04■□□□□ -0
Gtf3c6-206ENSMUST00000217537 Mphosph9A6H5Y1 991 aa15.04■□□□□ -0
Gtf3c6-206ENSMUST00000217537 Clasp1Q80TV8 1535 aaKnown RBP15.03■□□□□ -0
Gtf3c6-206ENSMUST00000217537 Rfx7F8VPJ6 1459 aa15.03■□□□□ -0
Gtf3c6-206ENSMUST00000217537 Abca9Q8K449 1623 aa15.02■□□□□ -0
Gtf3c6-206ENSMUST00000217537 Dnajc5P60904 198 aa15.02■□□□□ -0
Gtf3c6-206ENSMUST00000217537 Cfap74Q3UY96 1578 aa15.02■□□□□ -0
Gtf3c6-206ENSMUST00000217537 Depdc5P61460 1591 aa15.01□□□□□ -0.01
Gtf3c6-206ENSMUST00000217537 Mtus2Q3UHD3 1353 aa15.01□□□□□ -0.01
Gtf3c6-206ENSMUST00000217537 Kidins220E9Q9B7 1793 aa15.01□□□□□ -0.01
Gtf3c6-206ENSMUST00000217537 Trappc8E9PWG2 1437 aa15□□□□□ -0.01
Gtf3c6-206ENSMUST00000217537 Nolc1E9Q5C9 702 aaKnown RBP15□□□□□ -0.01
Gtf3c6-206ENSMUST00000217537 Ttc37F8VPK0 1563 aa15□□□□□ -0.01
Gtf3c6-206ENSMUST00000217537 Slc24a1Q91WD8 1130 aa15□□□□□ -0.01
Gtf3c6-206ENSMUST00000217537 Ncoa1P70365 1447 aa15□□□□□ -0.01
Gtf3c6-206ENSMUST00000217537 SphkapQ6NSW3 1687 aa14.98□□□□□ -0.01
Gtf3c6-206ENSMUST00000217537 Ppp1r18Q8BQ30 594 aa14.98□□□□□ -0.01
Gtf3c6-206ENSMUST00000217537 Hecw1Q8K4P8 1604 aa14.98□□□□□ -0.01
Gtf3c6-206ENSMUST00000217537 Abcc3B2RX12 1523 aa14.97□□□□□ -0.01
Gtf3c6-206ENSMUST00000217537 Rprd2Q6NXI6 1469 aaKnown RBP14.97□□□□□ -0.01
Gtf3c6-206ENSMUST00000217537 Usp47Q8BY87 1376 aa14.96□□□□□ -0.01
Gtf3c6-206ENSMUST00000217537 Cabp1Q9JLK7 227 aa14.96□□□□□ -0.02
Gtf3c6-206ENSMUST00000217537 Washc2Q6PGL7 1334 aa14.96□□□□□ -0.02
Gtf3c6-206ENSMUST00000217537 Cdc42bpbQ7TT50 1713 aa14.96□□□□□ -0.02
Gtf3c6-206ENSMUST00000217537 Kdm3bQ6ZPY7 1562 aa14.95□□□□□ -0.02
Gtf3c6-206ENSMUST00000217537 AglF8VPN4 1532 aa14.94□□□□□ -0.02
Gtf3c6-206ENSMUST00000217537 Fmn2Q9JL04 1578 aa14.94□□□□□ -0.02
Gtf3c6-206ENSMUST00000217537 Adgrb2Q8CGM1 1561 aa14.94□□□□□ -0.02
Gtf3c6-206ENSMUST00000217537 Pkd2O35245 966 aa14.93□□□□□ -0.02
Gtf3c6-206ENSMUST00000217537 Zfp644E9QA22 1323 aa14.92□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms