RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 Fbxo2Q80UW2 297 aa9.58□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Cwc15Q9JHS9 229 aaKnown RBP9.58□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Rufy1Q8BIJ7 712 aa9.57□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Ush1cQ9ES64 910 aa9.57□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Q8BT18 775 aa9.57□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Exosc9Q9JHI7 438 aaKnown RBP9.57□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Taf3Q5HZG4 932 aa9.56□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Ccdc47Q9D024 483 aaKnown RBP9.56□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Clip1Q922J3 1391 aa9.56□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Dnai1Q8C0M8 701 aa9.55□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Tcerg1Q8CGF7 1100 aaKnown RBP9.55□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Kri1Q8VDQ9 704 aaKnown RBP9.55□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Rb1cc1Q9ESK9 1588 aa9.55□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 MecomP14404 1042 aa9.54□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Glipr1l2Q9CQ35 332 aa9.54□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Dcaf1Q80TR8 1506 aa9.54□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Tpd52l1O54818 204 aa9.54□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Cwc22Q8C5N3 908 aaKnown RBP9.54□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Srpk2O54781 681 aaKnown RBP9.53□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Znhit6Q3UFB2 460 aaKnown RBP9.53□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Gpatch11Q3UFS4 262 aa9.53□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Ccer1Q9CQL2 403 aa9.53□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Apbb1Q9QXJ1 710 aa9.53□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Vps53Q8CCB4 832 aa9.52□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Spata24Q6P926 205 aa9.52□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Anp32eP97822 260 aaKnown RBP9.51□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Taok2Q6ZQ29 1240 aa9.51□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 CrebrfQ8CDG5 640 aaKnown RBP9.51□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Gm21969J3QJZ1 289 aa9.51□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Necab1Q8BG18 352 aa9.51□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Rwdd1Q9CQK7 243 aa9.51□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Srek1Q8BZX4 494 aaKnown RBP9.5□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Gps2Q921N8 327 aa9.5□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Neurod2Q62414 383 aa9.5□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Ralbp1Q62172 648 aa9.49□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Arid4aF8VPQ2 1261 aaKnown RBP9.49□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Pdcl3Q8BVF2 240 aa9.49□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Tmx4Q8C0L0 335 aa9.49□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Evc2Q8K1G2 1220 aa9.49□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Dbr1Q923B1 550 aa9.49□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Sf3a1Q8K4Z5 791 aaKnown RBP9.49□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 BbxQ8VBW5 907 aa9.48□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Def6Q8C2K1 630 aa9.48□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Rtf1A2AQ19 715 aaKnown RBP9.48□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Hook1Q8BIL5 728 aa9.48□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Sept11Q8C1B7 431 aaKnown RBP9.48□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 1700019A02RikA0A087WPV9 146 aa9.47□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Gabpb2P81069 414 aa9.47□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 HmmrQ00547 794 aaKnown RBP9.47□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 EspnQ9ET47 871 aa9.47□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Gcom1E9PZ54 550 aa9.47□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 MyzapQ3UIJ9 466 aa9.47□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Ccdc43Q9CR29 222 aaKnown RBP9.47□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Armcx1Q9CX83 456 aa9.46□□□□□ -0.89
Pcdh9-204ENSMUST00000193901 Arglu1Q3UL36 271 aaKnown RBP9.45□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Ppm1eQ80TL0 749 aa9.45□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Chmp5Q9D7S9 219 aa9.45□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 AppP12023 770 aa9.45□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Cplx2P84086 134 aa9.45□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Sycp1Q62209 993 aa9.45□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Znf771Q8BJ90 317 aa9.45□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Kdm5dQ62240 1548 aa9.45□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 B4galnt3Q6L8S8 986 aa9.45□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Plagl1Q9JLQ4 704 aa9.45□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Brd4Q9ESU6 1400 aaKnown RBP9.45□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Mns1Q61884 491 aa9.44□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Ddx11Q6AXC6 880 aa9.44□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 NaspQ99MD9 773 aaKnown RBP9.44□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Drc7Q6V3W6 876 aa9.44□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Ipo8Q7TMY7 1010 aa9.44□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Paf1Q8K2T8 535 aa9.44□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Supt16hQ920B9 1047 aa9.44□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Gm20521D3Z5F7 333 aa9.44□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Rgl3Q3UYI5 709 aa9.44□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Wdr78E9PYY5 807 aa9.44□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Chic2Q9D9G3 165 aa9.44□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Mex3cQ05A36 652 aaKnown RBP9.43□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 SlkO54988 1233 aa9.43□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 1700123L14RikQ3V2K7 440 aa9.43□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Nap1l3Q794H2 544 aa9.43□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Krt82Q99M74 516 aa9.43□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Ipo9Q91YE6 1041 aa9.43□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Sh3bgrQ9WUZ7 214 aa9.42□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Tomm22Q9CPQ3 142 aa9.42□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Hmgn5Q9JL35 406 aa9.42□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Card11Q8CIS0 1159 aa9.42□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Pknox2Q8BG99 474 aa9.42□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Baz1aO88379 1555 aa9.41□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Gbp4Q61107 620 aa9.41□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Fam193aQ8CGI1 1231 aaKnown RBP9.41□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Mroh3A0A1D5RM54 893 aa9.41□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 HdgfP51859 237 aaKnown RBP9.41□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Ak7Q9D2H2 614 aa9.41□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 St18Q80TY4 1045 aa9.4□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Rsph3aQ3UFY4 516 aa9.4□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Cgnl1Q6AW69 1298 aa9.4□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Trim55G3X8Y1 545 aa9.4□□□□□ -0.9
Pcdh9-204ENSMUST00000193901 Erlin2Q8BFZ9 340 aa9.4□□□□□ -0.91
Pcdh9-204ENSMUST00000193901 Mical1Q8VDP3 1048 aa9.4□□□□□ -0.91
Pcdh9-204ENSMUST00000193901 Ipo4Q8VI75 1082 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms