RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 Cdc42bpaQ3UU96 1719 aa19.41■□□□□ 0.7
Ccdc28a-203ENSMUST00000173243 Fam208aQ69ZR9 1610 aaKnown RBP19.4■□□□□ 0.7
Ccdc28a-203ENSMUST00000173243 Gm1043A0A140LJC2 1431 aa19.38■□□□□ 0.69
Ccdc28a-203ENSMUST00000173243 Fndc1E9Q043 1732 aa19.36■□□□□ 0.69
Ccdc28a-203ENSMUST00000173243 A2mQ6GQT1 1474 aa19.35■□□□□ 0.69
Ccdc28a-203ENSMUST00000173243 Tiam1Q60610 1591 aa19.35■□□□□ 0.69
Ccdc28a-203ENSMUST00000173243 Naip1Q9QWK5 1403 aa19.34■□□□□ 0.69
Ccdc28a-203ENSMUST00000173243 Rnf17Q99MV7 1640 aa19.32■□□□□ 0.68
Ccdc28a-203ENSMUST00000173243 Mlh3A0A1Y7VMP7 1443 aa19.31■□□□□ 0.68
Ccdc28a-203ENSMUST00000173243 NexmifQ5DTT1 1515 aa19.26■□□□□ 0.67
Ccdc28a-203ENSMUST00000173243 Abca9Q8K449 1623 aa19.26■□□□□ 0.67
Ccdc28a-203ENSMUST00000173243 Kiaa0556Q8C753 1610 aa19.25■□□□□ 0.67
Ccdc28a-203ENSMUST00000173243 Lmtk2Q3TYD6 1471 aa19.22■□□□□ 0.67
Ccdc28a-203ENSMUST00000173243 Lmod2Q3UHZ5 550 aa19.21■□□□□ 0.67
Ccdc28a-203ENSMUST00000173243 Pdcd11Q6NS46 1862 aaKnown RBP19.21■□□□□ 0.67
Ccdc28a-203ENSMUST00000173243 Ncapd3Q6ZQK0 1506 aa19.2■□□□□ 0.66
Ccdc28a-203ENSMUST00000173243 Arhgap5P97393 1501 aa19.2■□□□□ 0.66
Ccdc28a-203ENSMUST00000173243 Caskin1Q6P9K8 1431 aa19.17■□□□□ 0.66
Ccdc28a-203ENSMUST00000173243 Synj2Q9D2G5 1434 aa19.17■□□□□ 0.66
Ccdc28a-203ENSMUST00000173243 Cfap74Q3UY96 1578 aa19.16■□□□□ 0.66
Ccdc28a-203ENSMUST00000173243 Hecw2Q6I6G8 1578 aa19.15■□□□□ 0.66
Ccdc28a-203ENSMUST00000173243 Alpk3Q924C5 1678 aa19.15■□□□□ 0.66
Ccdc28a-203ENSMUST00000173243 Abcc3B2RX12 1523 aa19.13■□□□□ 0.65
Ccdc28a-203ENSMUST00000173243 Gm32742A0A1B0GT42 1604 aa19.13■□□□□ 0.65
Ccdc28a-203ENSMUST00000173243 Kidins220E9Q9B7 1793 aa19.13■□□□□ 0.65
Ccdc28a-203ENSMUST00000173243 Adcy10Q8C0T9 1614 aa19.12■□□□□ 0.65
Ccdc28a-203ENSMUST00000173243 Ccnb3Q810T2 1396 aa19.1■□□□□ 0.65
Ccdc28a-203ENSMUST00000173243 OvosQ3UU35 1456 aa19.09■□□□□ 0.65
Ccdc28a-203ENSMUST00000173243 Kdm5cP41230 1554 aa19.08■□□□□ 0.65
Ccdc28a-203ENSMUST00000173243 Lemd3Q9WU40 921 aa19.08■□□□□ 0.64
Ccdc28a-203ENSMUST00000173243 Tdrd9Q14BI7 1383 aa19.07■□□□□ 0.64
Ccdc28a-203ENSMUST00000173243 Plekhg3Q4VAC9 1341 aa19.06■□□□□ 0.64
Ccdc28a-203ENSMUST00000173243 Cdk11bP24788 784 aaKnown RBP19.06■□□□□ 0.64
Ccdc28a-203ENSMUST00000173243 Trappc8E9PWG2 1437 aa19.05■□□□□ 0.64
Ccdc28a-203ENSMUST00000173243 Dnajc5gQ8C632 165 aa19.04■□□□□ 0.64
Ccdc28a-203ENSMUST00000173243 Kif14L0N7N1 1674 aaKnown RBP19.04■□□□□ 0.64
Ccdc28a-203ENSMUST00000173243 Arhgef40Q3UPH7 1517 aa19.04■□□□□ 0.64
Ccdc28a-203ENSMUST00000173243 Cul9Q80TT8 1865 aa19.03■□□□□ 0.64
Ccdc28a-203ENSMUST00000173243 Atp10aO54827 1508 aa19.02■□□□□ 0.64
Ccdc28a-203ENSMUST00000173243 Naip2Q9QUK4 1447 aa19.01■□□□□ 0.63
Ccdc28a-203ENSMUST00000173243 Hecw1Q8K4P8 1604 aa18.99■□□□□ 0.63
Ccdc28a-203ENSMUST00000173243 Zmym4A2A791 1549 aaKnown RBP18.99■□□□□ 0.63
Ccdc28a-203ENSMUST00000173243 Kdm6bQ5NCY0 1641 aa18.98■□□□□ 0.63
Ccdc28a-203ENSMUST00000173243 Dip2cE9PWR4 1557 aa18.97■□□□□ 0.63
Ccdc28a-203ENSMUST00000173243 RereQ80TZ9 1558 aa18.97■□□□□ 0.63
Ccdc28a-203ENSMUST00000173243 Qser1A2BIE1 1698 aa18.95■□□□□ 0.62
Ccdc28a-203ENSMUST00000173243 Cdc42bpbQ7TT50 1713 aa18.95■□□□□ 0.62
Ccdc28a-203ENSMUST00000173243 Ptch1Q61115 1434 aa18.94■□□□□ 0.62
Ccdc28a-203ENSMUST00000173243 Sart1Q9Z315 806 aaKnown RBP18.94■□□□□ 0.62
Ccdc28a-203ENSMUST00000173243 Neurl4Q5NCX5 1563 aa18.93■□□□□ 0.62
Ccdc28a-203ENSMUST00000173243 Plppr3Q7TPB0 716 aa18.92■□□□□ 0.62
Ccdc28a-203ENSMUST00000173243 Yeats2Q3TUF7 1407 aa18.91■□□□□ 0.62
Ccdc28a-203ENSMUST00000173243 Adamtsl3G3UXC7 1706 aa18.91■□□□□ 0.62
Ccdc28a-203ENSMUST00000173243 NpatQ8BMA5 1420 aa18.91■□□□□ 0.62
Ccdc28a-203ENSMUST00000173243 Mast1Q9R1L5 1570 aa18.89■□□□□ 0.61
Ccdc28a-203ENSMUST00000173243 Camsap2Q8C1B1 1461 aa18.87■□□□□ 0.61
Ccdc28a-203ENSMUST00000173243 Cdc42bpgQ80UW5 1551 aa18.86■□□□□ 0.61
Ccdc28a-203ENSMUST00000173243 Abcc5Q9R1X5 1436 aa18.85■□□□□ 0.61
Ccdc28a-203ENSMUST00000173243 Fhod3Q76LL6 1578 aa18.85■□□□□ 0.61
Ccdc28a-203ENSMUST00000173243 Nos1Q9Z0J4 1429 aa18.84■□□□□ 0.61
Ccdc28a-203ENSMUST00000173243 Plekhh2Q8C115 1491 aa18.84■□□□□ 0.61
Ccdc28a-203ENSMUST00000173243 3425401B19RikD3Z1D3 1412 aa18.83■□□□□ 0.61
Ccdc28a-203ENSMUST00000173243 SphkapQ6NSW3 1687 aa18.83■□□□□ 0.61
Ccdc28a-203ENSMUST00000173243 Trpm1Q2TV84 1622 aa18.83■□□□□ 0.61
Ccdc28a-203ENSMUST00000173243 Prdm16A2A935 1275 aa18.83■□□□□ 0.6
Ccdc28a-203ENSMUST00000173243 Mtus2Q3UHD3 1353 aa18.82■□□□□ 0.6
Ccdc28a-203ENSMUST00000173243 MlecQ6ZQI3 291 aaKnown RBP18.8■□□□□ 0.6
Ccdc28a-203ENSMUST00000173243 Fmn2Q9JL04 1578 aa18.8■□□□□ 0.6
Ccdc28a-203ENSMUST00000173243 Il16O54824 1322 aa18.78■□□□□ 0.6
Ccdc28a-203ENSMUST00000173243 Cfap65Q3V0B4 1847 aa18.77■□□□□ 0.6
Ccdc28a-203ENSMUST00000173243 Brwd3A2AHJ4 1799 aa18.76■□□□□ 0.59
Ccdc28a-203ENSMUST00000173243 Map3k5O35099 1380 aa18.76■□□□□ 0.59
Ccdc28a-203ENSMUST00000173243 Adgrl2Q8JZZ7 1487 aa18.76■□□□□ 0.59
Ccdc28a-203ENSMUST00000173243 Talpid3E9PV87 1520 aa18.75■□□□□ 0.59
Ccdc28a-203ENSMUST00000173243 Znf518aB2RRF6 1478 aaKnown RBP18.75■□□□□ 0.59
Ccdc28a-203ENSMUST00000173243 Xrn1P97789 1719 aaKnown RBP18.74■□□□□ 0.59
Ccdc28a-203ENSMUST00000173243 Dennd4bQ3U1Y4 1499 aa18.74■□□□□ 0.59
Ccdc28a-203ENSMUST00000173243 Abca17E9PX95 1733 aa18.72■□□□□ 0.59
Ccdc28a-203ENSMUST00000173243 Plch2A2AP18 1501 aa18.72■□□□□ 0.59
Ccdc28a-203ENSMUST00000173243 Gli2Q0VGT2 1544 aa18.72■□□□□ 0.59
Ccdc28a-203ENSMUST00000173243 Uggt2E9Q4X2 1504 aa18.71■□□□□ 0.59
Ccdc28a-203ENSMUST00000173243 Rrp7aQ9D1C9 280 aaKnown RBP18.71■□□□□ 0.59
Ccdc28a-203ENSMUST00000173243 Naip6Q9JIB6 1403 aa18.71■□□□□ 0.59
Ccdc28a-203ENSMUST00000173243 Cabp1Q9JLK7 227 aa18.7■□□□□ 0.58
Ccdc28a-203ENSMUST00000173243 Kdm3bQ6ZPY7 1562 aa18.69■□□□□ 0.58
Ccdc28a-203ENSMUST00000173243 Supt6hQ62383 1726 aaKnown RBP18.68■□□□□ 0.58
Ccdc28a-203ENSMUST00000173243 Topbp1Q6ZQF0 1515 aa18.68■□□□□ 0.58
Ccdc28a-203ENSMUST00000173243 Rsph4aQ8BYM7 716 aa18.67■□□□□ 0.58
Ccdc28a-203ENSMUST00000173243 UacaQ8CGB3 1411 aa18.66■□□□□ 0.58
Ccdc28a-203ENSMUST00000173243 Safb2Q80YR5 991 aaKnown RBP18.66■□□□□ 0.58
Ccdc28a-203ENSMUST00000173243 Myom2Q14BI5 1463 aa18.65■□□□□ 0.58
Ccdc28a-203ENSMUST00000173243 Abca6Q8K441 1624 aa18.65■□□□□ 0.58
Ccdc28a-203ENSMUST00000173243 PtprmP28828 1452 aa18.65■□□□□ 0.58
Ccdc28a-203ENSMUST00000173243 Rfx7F8VPJ6 1459 aa18.64■□□□□ 0.57
Ccdc28a-203ENSMUST00000173243 Adgrb2Q8CGM1 1561 aa18.64■□□□□ 0.57
Ccdc28a-203ENSMUST00000173243 Spag9Q58A65 1321 aaKnown RBP18.62■□□□□ 0.57
Ccdc28a-203ENSMUST00000173243 Trpm2Q91YD4 1506 aa18.61■□□□□ 0.57
Ccdc28a-203ENSMUST00000173243 Afap1Q80YS6 731 aa18.6■□□□□ 0.57
Ccdc28a-203ENSMUST00000173243 Kif3bQ61771 747 aa18.59■□□□□ 0.57
Ccdc28a-203ENSMUST00000173243 Chic2Q9D9G3 165 aa18.59■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 113.3 ms