RNA–Protein interactions for RNA: ENSMUST00000172775.3

Msx3-202, Transcript of Homeobox protein MSX-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msx3, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-202ENSMUST00000172775 Fancd2Q80V62 1450 aa30.28■■■□□ 2.44
Msx3-202ENSMUST00000172775 Mtus2Q3UHD3 1353 aa30.27■■■□□ 2.44
Msx3-202ENSMUST00000172775 Mlh3A0A1Y7VMP7 1443 aa30.27■■■□□ 2.44
Msx3-202ENSMUST00000172775 NclP09405 707 aaKnown RBP30.27■■■□□ 2.44
Msx3-202ENSMUST00000172775 Dennd4bQ3U1Y4 1499 aa30.26■■■□□ 2.44
Msx3-202ENSMUST00000172775 Cabp1Q9JLK7 227 aa30.26■■■□□ 2.43
Msx3-202ENSMUST00000172775 Fhod3Q76LL6 1578 aa30.25■■■□□ 2.43
Msx3-202ENSMUST00000172775 Wdr66E9Q743 1299 aa30.25■■■□□ 2.43
Msx3-202ENSMUST00000172775 Ube2uB1AUC4 352 aa30.24■■■□□ 2.43
Msx3-202ENSMUST00000172775 Abcc1O35379 1528 aa30.24■■■□□ 2.43
Msx3-202ENSMUST00000172775 Il16O54824 1322 aa30.24■■■□□ 2.43
Msx3-202ENSMUST00000172775 Fkbp15Q6P9Q6 1216 aaKnown RBP30.24■■■□□ 2.43
Msx3-202ENSMUST00000172775 Sall2Q9QX96 1004 aa30.24■■■□□ 2.43
Msx3-202ENSMUST00000172775 Aebp2Q9Z248 504 aaKnown RBP30.24■■■□□ 2.43
Msx3-202ENSMUST00000172775 Caskin1Q6P9K8 1431 aa30.22■■■□□ 2.43
Msx3-202ENSMUST00000172775 Kdm6bQ5NCY0 1641 aa30.21■■■□□ 2.43
Msx3-202ENSMUST00000172775 ClspnQ80YR7 1315 aa30.17■■■□□ 2.42
Msx3-202ENSMUST00000172775 Chd1P40201 1711 aa30.15■■■□□ 2.42
Msx3-202ENSMUST00000172775 Fam208aQ69ZR9 1610 aaKnown RBP30.12■■■□□ 2.41
Msx3-202ENSMUST00000172775 Kdm3bQ6ZPY7 1562 aa30.11■■■□□ 2.41
Msx3-202ENSMUST00000172775 Tdrd9Q14BI7 1383 aa30.09■■■□□ 2.41
Msx3-202ENSMUST00000172775 Kiaa1210E9Q0C6 1637 aa30.09■■■□□ 2.41
Msx3-202ENSMUST00000172775 Wdr7Q920I9 1489 aa30.08■■■□□ 2.41
Msx3-202ENSMUST00000172775 Cul7Q8VE73 1689 aa30.07■■■□□ 2.4
Msx3-202ENSMUST00000172775 Mphosph9A6H5Y1 991 aa30.05■■■□□ 2.4
Msx3-202ENSMUST00000172775 SphkapQ6NSW3 1687 aa30.04■■■□□ 2.4
Msx3-202ENSMUST00000172775 NhsB1AV60 1647 aa30.03■■■□□ 2.4
Msx3-202ENSMUST00000172775 Hspa5P20029 655 aaKnown RBP30.02■■■□□ 2.4
Msx3-202ENSMUST00000172775 Setbp1Q9Z180 1582 aa29.98■■■□□ 2.39
Msx3-202ENSMUST00000172775 Rnf17Q99MV7 1640 aa29.97■■■□□ 2.39
Msx3-202ENSMUST00000172775 Igf1rQ60751 1373 aa29.96■■■□□ 2.39
Msx3-202ENSMUST00000172775 Adgrb2Q8CGM1 1561 aa29.96■■■□□ 2.39
Msx3-202ENSMUST00000172775 Arhgap5P97393 1501 aa29.93■■■□□ 2.38
Msx3-202ENSMUST00000172775 Lamc1P02468 1607 aaKnown RBP29.9■■■□□ 2.38
Msx3-202ENSMUST00000172775 Ythdc2B2RR83 1445 aaKnown RBP29.9■■■□□ 2.38
Msx3-202ENSMUST00000172775 Cfap74Q3UY96 1578 aa29.89■■■□□ 2.38
Msx3-202ENSMUST00000172775 Fmn2Q9JL04 1578 aa29.88■■■□□ 2.37
Msx3-202ENSMUST00000172775 Zfp644E9QA22 1323 aa29.88■■■□□ 2.37
Msx3-202ENSMUST00000172775 AlkP97793 1621 aa29.88■■■□□ 2.37
Msx3-202ENSMUST00000172775 Atp10dQ8K2X1 1416 aa29.87■■■□□ 2.37
Msx3-202ENSMUST00000172775 Abca8bQ8K440 1620 aa29.86■■■□□ 2.37
Msx3-202ENSMUST00000172775 Gm32742A0A1B0GT42 1604 aa29.85■■■□□ 2.37
Msx3-202ENSMUST00000172775 Camsap2Q8C1B1 1461 aa29.85■■■□□ 2.37
Msx3-202ENSMUST00000172775 Pelp1Q9DBD5 1123 aaKnown RBP29.84■■■□□ 2.37
Msx3-202ENSMUST00000172775 Pdcd11Q6NS46 1862 aaKnown RBP29.83■■■□□ 2.37
Msx3-202ENSMUST00000172775 Adgrl2Q8JZZ7 1487 aa29.82■■■□□ 2.36
Msx3-202ENSMUST00000172775 Naip5Q9R016 1403 aa29.82■■■□□ 2.36
Msx3-202ENSMUST00000172775 Pkd2O35245 966 aa29.81■■■□□ 2.36
Msx3-202ENSMUST00000172775 Neurl4Q5NCX5 1563 aa29.8■■■□□ 2.36
Msx3-202ENSMUST00000172775 Pabpn1Q8CCS6 302 aaKnown RBP29.78■■■□□ 2.36
Msx3-202ENSMUST00000172775 Kif21bQ9QXL1 1668 aa29.78■■■□□ 2.36
Msx3-202ENSMUST00000172775 Gapvd1Q6PAR5 1458 aa29.78■■■□□ 2.36
Msx3-202ENSMUST00000172775 Mast1Q9R1L5 1570 aa29.78■■■□□ 2.36
Msx3-202ENSMUST00000172775 Trappc8E9PWG2 1437 aa29.75■■■□□ 2.35
Msx3-202ENSMUST00000172775 Trpm2Q91YD4 1506 aa29.74■■■□□ 2.35
Msx3-202ENSMUST00000172775 Rprd2Q6NXI6 1469 aaKnown RBP29.73■■■□□ 2.35
Msx3-202ENSMUST00000172775 Nup155Q99P88 1391 aaKnown RBP29.73■■■□□ 2.35
Msx3-202ENSMUST00000172775 Sart1Q9Z315 806 aaKnown RBP29.73■■■□□ 2.35
Msx3-202ENSMUST00000172775 PtprtQ99M80 1454 aa29.72■■■□□ 2.35
Msx3-202ENSMUST00000172775 Abcc3B2RX12 1523 aa29.72■■■□□ 2.35
Msx3-202ENSMUST00000172775 Hecw1Q8K4P8 1604 aa29.71■■■□□ 2.35
Msx3-202ENSMUST00000172775 Usp47Q8BY87 1376 aa29.69■■■□□ 2.34
Msx3-202ENSMUST00000172775 Gm13697A2AK42 830 aa29.68■■■□□ 2.34
Msx3-202ENSMUST00000172775 AI481877A2ALV5 1481 aa29.68■■■□□ 2.34
Msx3-202ENSMUST00000172775 Clstn2Q9ER65 966 aa29.68■■■□□ 2.34
Msx3-202ENSMUST00000172775 Pik3c2gO70167 1506 aa29.68■■■□□ 2.34
Msx3-202ENSMUST00000172775 Ttll5Q8CHB8 1328 aa29.68■■■□□ 2.34
Msx3-202ENSMUST00000172775 Rrp7aQ9D1C9 280 aaKnown RBP29.67■■■□□ 2.34
Msx3-202ENSMUST00000172775 Lrrc9Q8CDN9 1456 aa29.66■■■□□ 2.34
Msx3-202ENSMUST00000172775 Ppargc1bQ8VHJ7 1014 aa29.65■■■□□ 2.34
Msx3-202ENSMUST00000172775 Znf608Q56A10 1511 aa29.65■■■□□ 2.34
Msx3-202ENSMUST00000172775 Ifnlr1Q8CGK5 535 aa29.64■■■□□ 2.33
Msx3-202ENSMUST00000172775 Prdm16A2A935 1275 aa29.63■■■□□ 2.33
Msx3-202ENSMUST00000172775 Map4P27546 1125 aaKnown RBP29.63■■■□□ 2.33
Msx3-202ENSMUST00000172775 DroshaQ5HZJ0 1373 aaKnown RBP29.61■■■□□ 2.33
Msx3-202ENSMUST00000172775 Supt6hQ62383 1726 aaKnown RBP29.6■■■□□ 2.33
Msx3-202ENSMUST00000172775 Ssh2Q5SW75 1423 aa29.59■■■□□ 2.33
Msx3-202ENSMUST00000172775 Pprc1Q6NZN1 1644 aa29.59■■■□□ 2.33
Msx3-202ENSMUST00000172775 Trak1Q6PD31 939 aa29.59■■■□□ 2.33
Msx3-202ENSMUST00000172775 Cep170Q6A065 1588 aa29.58■■■□□ 2.33
Msx3-202ENSMUST00000172775 Cdc42bpbQ7TT50 1713 aa29.54■■■□□ 2.32
Msx3-202ENSMUST00000172775 PtprgQ05909 1442 aa29.52■■■□□ 2.32
Msx3-202ENSMUST00000172775 Kidins220E9Q9B7 1793 aa29.51■■■□□ 2.32
Msx3-202ENSMUST00000172775 Dhx9O70133 1380 aaKnown RBP29.51■■■□□ 2.32
Msx3-202ENSMUST00000172775 Zfyve16Q80U44 1528 aa29.51■■■□□ 2.32
Msx3-202ENSMUST00000172775 Arid3cA6PWV5 409 aa29.47■■■□□ 2.31
Msx3-202ENSMUST00000172775 Spag9Q58A65 1321 aaKnown RBP29.46■■■□□ 2.31
Msx3-202ENSMUST00000172775 Neurod1Q60867 357 aa29.4■■■□□ 2.3
Msx3-202ENSMUST00000172775 Nop58Q6DFW4 536 aaKnown RBP29.4■■■□□ 2.3
Msx3-202ENSMUST00000172775 Abca9Q8K449 1623 aa29.39■■■□□ 2.3
Msx3-202ENSMUST00000172775 Gm156Q58A37 223 aa29.38■■■□□ 2.29
Msx3-202ENSMUST00000172775 Lemd3Q9WU40 921 aa29.38■■■□□ 2.29
Msx3-202ENSMUST00000172775 Kif14L0N7N1 1674 aaKnown RBP29.37■■■□□ 2.29
Msx3-202ENSMUST00000172775 Map3k5O35099 1380 aa29.37■■■□□ 2.29
Msx3-202ENSMUST00000172775 Cd109Q8R422 1442 aa29.36■■■□□ 2.29
Msx3-202ENSMUST00000172775 Asxl1P59598 1514 aa29.35■■■□□ 2.29
Msx3-202ENSMUST00000172775 Rgl3Q3UYI5 709 aa29.34■■■□□ 2.29
Msx3-202ENSMUST00000172775 Zbtb7cQ8VCZ7 619 aa29.34■■■□□ 2.29
Msx3-202ENSMUST00000172775 Abca17E9PX95 1733 aa29.32■■■□□ 2.28
Msx3-202ENSMUST00000172775 Rock1P70335 1354 aa29.31■■■□□ 2.28
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms