RNA–Protein interactions for RNA: ENSMUST00000168162.4

Pdgfra-202, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,834 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-202ENSMUST00000168162 Gm6268A2A3U9 297 aa13.51□□□□□ -0.25
Pdgfra-202ENSMUST00000168162 Cux2P70298 1426 aa13.51□□□□□ -0.25
Pdgfra-202ENSMUST00000168162 Aebp2Q9Z248 504 aaKnown RBP13.5□□□□□ -0.25
Pdgfra-202ENSMUST00000168162 G430095P16RikE9Q913 147 aa13.49□□□□□ -0.25
Pdgfra-202ENSMUST00000168162 GphnQ8BUV3 769 aaKnown RBP13.49□□□□□ -0.25
Pdgfra-202ENSMUST00000168162 Rgl3Q3UYI5 709 aa13.47□□□□□ -0.25
Pdgfra-202ENSMUST00000168162 Dnajc5bQ9CQ94 199 aa13.47□□□□□ -0.25
Pdgfra-202ENSMUST00000168162 Isy1Q69ZQ2 285 aaKnown RBP13.46□□□□□ -0.26
Pdgfra-202ENSMUST00000168162 Hsp90aa1P07901 733 aaKnown RBP13.46□□□□□ -0.26
Pdgfra-202ENSMUST00000168162 Rtf1A2AQ19 715 aaKnown RBP13.45□□□□□ -0.26
Pdgfra-202ENSMUST00000168162 Ttc5Q99LG4 440 aa13.44□□□□□ -0.26
Pdgfra-202ENSMUST00000168162 Paf1Q8K2T8 535 aa13.44□□□□□ -0.26
Pdgfra-202ENSMUST00000168162 Dnajc5P60904 198 aa13.44□□□□□ -0.26
Pdgfra-202ENSMUST00000168162 BlmO88700 1416 aa13.43□□□□□ -0.26
Pdgfra-202ENSMUST00000168162 PnnO35691 725 aaKnown RBP13.43□□□□□ -0.26
Pdgfra-202ENSMUST00000168162 Vps53Q8CCB4 832 aa13.42□□□□□ -0.26
Pdgfra-202ENSMUST00000168162 Birc3O08863 600 aa13.42□□□□□ -0.26
Pdgfra-202ENSMUST00000168162 Ca8P28651 291 aa13.42□□□□□ -0.26
Pdgfra-202ENSMUST00000168162 Sytl4Q9R0Q1 673 aa13.42□□□□□ -0.26
Pdgfra-202ENSMUST00000168162 GlmnQ8BZM1 596 aa13.41□□□□□ -0.26
Pdgfra-202ENSMUST00000168162 Cabp4Q8VHC5 271 aa13.41□□□□□ -0.26
Pdgfra-202ENSMUST00000168162 Armc3A2AU72 881 aa13.4□□□□□ -0.26
Pdgfra-202ENSMUST00000168162 Clip1Q922J3 1391 aa13.4□□□□□ -0.26
Pdgfra-202ENSMUST00000168162 NefmP08553 848 aa13.4□□□□□ -0.26
Pdgfra-202ENSMUST00000168162 Bicdl1A0JNT9 577 aa13.39□□□□□ -0.27
Pdgfra-202ENSMUST00000168162 Ccnb3Q810T2 1396 aa13.39□□□□□ -0.27
Pdgfra-202ENSMUST00000168162 Hmgb2P30681 210 aaKnown RBP13.39□□□□□ -0.27
Pdgfra-202ENSMUST00000168162 OscarQ8VBT3 265 aa13.38□□□□□ -0.27
Pdgfra-202ENSMUST00000168162 Ppp4r2Q0VGB7 417 aa13.38□□□□□ -0.27
Pdgfra-202ENSMUST00000168162 Mtus2Q3UHD3 1353 aa13.38□□□□□ -0.27
Pdgfra-202ENSMUST00000168162 4933416C03RikQ3V063 378 aa13.38□□□□□ -0.27
Pdgfra-202ENSMUST00000168162 Utp14aQ640M1 767 aaKnown RBP13.38□□□□□ -0.27
Pdgfra-202ENSMUST00000168162 Chmp3Q9CQ10 224 aa13.36□□□□□ -0.27
Pdgfra-202ENSMUST00000168162 Rtl5Q5DTT4 599 aa13.35□□□□□ -0.27
Pdgfra-202ENSMUST00000168162 Fchsd2Q3USJ8 740 aa13.35□□□□□ -0.27
Pdgfra-202ENSMUST00000168162 Kiaa1211Q5PR69 1207 aa13.34□□□□□ -0.27
Pdgfra-202ENSMUST00000168162 Afap1Q80YS6 731 aa13.34□□□□□ -0.27
Pdgfra-202ENSMUST00000168162 Ankrd13dQ6PD24 605 aa13.33□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Gm21698A0A087WQP8 267 aa13.33□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Gm21671G3UY31 267 aa13.33□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Dhx16G3X8X0 1044 aaKnown RBP13.33□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Ppm1gQ61074 542 aa13.32□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Ttll12Q3UDE2 639 aa13.32□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Stk3Q9JI10 497 aa13.31□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Gm21190A0A0G2JGJ6 266 aa13.31□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Mapk8ip3Q9ESN9 1337 aa13.31□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Myt1Q8CFC2 1127 aa13.3□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Zeb2Q9R0G7 1215 aa13.3□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Map4P27546 1125 aaKnown RBP13.3□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 PrkcshO08795 521 aa13.3□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Prm3Q62100 101 aa13.3□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Shq1Q7TMX5 569 aa13.29□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Prkag2Q91WG5 566 aa13.29□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Chmp7Q8R1T1 451 aa13.28□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Abcc8B2RUS7 1588 aa13.28□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Znf710Q3U288 666 aa13.28□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Dnai2A2AC93 623 aa13.27□□□□□ -0.28
Pdgfra-202ENSMUST00000168162 Qtrt2B8ZXI1 415 aa13.26□□□□□ -0.29
Pdgfra-202ENSMUST00000168162 Dusp27Q148W8 1138 aa13.26□□□□□ -0.29
Pdgfra-202ENSMUST00000168162 Zranb3Q6NZP1 1069 aa13.26□□□□□ -0.29
Pdgfra-202ENSMUST00000168162 Cecr2E9Q2Z1 1453 aa13.26□□□□□ -0.29
Pdgfra-202ENSMUST00000168162 Jdp2P97875 163 aa13.26□□□□□ -0.29
Pdgfra-202ENSMUST00000168162 Smg7Q5RJH6 1138 aaKnown RBP13.26□□□□□ -0.29
Pdgfra-202ENSMUST00000168162 Skor2A7M7C7 1008 aa13.25□□□□□ -0.29
Pdgfra-202ENSMUST00000168162 Champ1Q8K327 802 aaKnown RBP13.25□□□□□ -0.29
Pdgfra-202ENSMUST00000168162 Grm1P97772 1199 aa13.25□□□□□ -0.29
Pdgfra-202ENSMUST00000168162 Noc3lQ8VI84 807 aaKnown RBP13.24□□□□□ -0.29
Pdgfra-202ENSMUST00000168162 Pes1Q9EQ61 584 aaKnown RBP13.24□□□□□ -0.29
Pdgfra-202ENSMUST00000168162 Kif27Q7M6Z4 1394 aa13.23□□□□□ -0.29
Pdgfra-202ENSMUST00000168162 ZgpatQ8VDM1 511 aa13.23□□□□□ -0.29
Pdgfra-202ENSMUST00000168162 Urb2E9Q7L1 1524 aaKnown RBP13.22□□□□□ -0.29
Pdgfra-202ENSMUST00000168162 Eid3Q3V124 375 aa13.21□□□□□ -0.29
Pdgfra-202ENSMUST00000168162 Sh3bp5Q9Z131 463 aa13.21□□□□□ -0.29
Pdgfra-202ENSMUST00000168162 Setd5Q5XJV7 1441 aa13.21□□□□□ -0.3
Pdgfra-202ENSMUST00000168162 U2surpQ6NV83 1029 aaKnown RBP13.2□□□□□ -0.3
Pdgfra-202ENSMUST00000168162 Ifit1bl1D3Z6F0 470 aa13.2□□□□□ -0.3
Pdgfra-202ENSMUST00000168162 Q3TQI7 289 aaKnown RBP13.19□□□□□ -0.3
Pdgfra-202ENSMUST00000168162 Gm10471E9Q1C7 252 aa13.19□□□□□ -0.3
Pdgfra-202ENSMUST00000168162 Cc2d1aQ8K1A6 943 aa13.19□□□□□ -0.3
Pdgfra-202ENSMUST00000168162 GnpatP98192 678 aa13.19□□□□□ -0.3
Pdgfra-202ENSMUST00000168162 Rbm26Q6NZN0 1012 aaKnown RBP13.19□□□□□ -0.3
Pdgfra-202ENSMUST00000168162 Msl1Q6PDM1 616 aa13.19□□□□□ -0.3
Pdgfra-202ENSMUST00000168162 Trap1aP19473 224 aa13.18□□□□□ -0.3
Pdgfra-202ENSMUST00000168162 Lmod1Q8BVA4 595 aa13.18□□□□□ -0.3
Pdgfra-202ENSMUST00000168162 Sart1Q9Z315 806 aaKnown RBP13.17□□□□□ -0.3
Pdgfra-202ENSMUST00000168162 AcrbpQ3V140 540 aa13.16□□□□□ -0.3
Pdgfra-202ENSMUST00000168162 PtprkP35822 1457 aa13.16□□□□□ -0.3
Pdgfra-202ENSMUST00000168162 Tcerg1Q8CGF7 1100 aaKnown RBP13.16□□□□□ -0.3
Pdgfra-202ENSMUST00000168162 BcanQ61361 883 aa13.15□□□□□ -0.3
Pdgfra-202ENSMUST00000168162 ChgaP26339 463 aaKnown RBP13.15□□□□□ -0.3
Pdgfra-202ENSMUST00000168162 Klc3Q91W40 508 aa13.14□□□□□ -0.31
Pdgfra-202ENSMUST00000168162 Ell2Q3UKU1 639 aa13.14□□□□□ -0.31
Pdgfra-202ENSMUST00000168162 TatQ8QZR1 454 aa13.12□□□□□ -0.31
Pdgfra-202ENSMUST00000168162 Speer4bQ9D9F7 267 aa13.12□□□□□ -0.31
Pdgfra-202ENSMUST00000168162 TonslQ6NZL6 1363 aa13.12□□□□□ -0.31
Pdgfra-202ENSMUST00000168162 Gm21680A0A0G2JGR8 267 aa13.12□□□□□ -0.31
Pdgfra-202ENSMUST00000168162 Mphosph10Q810V0 681 aaKnown RBP13.12□□□□□ -0.31
Pdgfra-202ENSMUST00000168162 Plekhd1B2RPU2 505 aa13.11□□□□□ -0.31
Pdgfra-202ENSMUST00000168162 Mapk8ip1Q9WVI9 707 aa13.11□□□□□ -0.31
Pdgfra-202ENSMUST00000168162 ApobrQ8VBT6 942 aa13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms