RNA–Protein interactions for RNA: ENSMUST00000166397.2

Suds3-202, Transcript of Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Suds3, Length 1,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3-202ENSMUST00000166397 Arid3cA6PWV5 409 aa38.3■■■■□ 3.72
Suds3-202ENSMUST00000166397 Dhx57Q6P5D3 1388 aaKnown RBP38.29■■■■□ 3.72
Suds3-202ENSMUST00000166397 Lmtk2Q3TYD6 1471 aa38.24■■■■□ 3.71
Suds3-202ENSMUST00000166397 Fam208aQ69ZR9 1610 aaKnown RBP38.24■■■■□ 3.71
Suds3-202ENSMUST00000166397 Clasp1Q80TV8 1535 aaKnown RBP38.19■■■■□ 3.7
Suds3-202ENSMUST00000166397 Ccnb3Q810T2 1396 aa38.12■■■■□ 3.69
Suds3-202ENSMUST00000166397 Ppp1r18Q8BQ30 594 aa38.1■■■■□ 3.69
Suds3-202ENSMUST00000166397 Ttc37F8VPK0 1563 aa38.07■■■■□ 3.68
Suds3-202ENSMUST00000166397 Depdc5P61460 1591 aa38.06■■■■□ 3.68
Suds3-202ENSMUST00000166397 Zfyve16Q80U44 1528 aa38.04■■■■□ 3.68
Suds3-202ENSMUST00000166397 A2mQ6GQT1 1474 aa38.02■■■■□ 3.68
Suds3-202ENSMUST00000166397 Adcy10Q8C0T9 1614 aa38.01■■■■□ 3.68
Suds3-202ENSMUST00000166397 Rnf17Q99MV7 1640 aa37.99■■■■□ 3.67
Suds3-202ENSMUST00000166397 Arhgef40Q3UPH7 1517 aa37.97■■■■□ 3.67
Suds3-202ENSMUST00000166397 Pcdh10E9PXQ7 1057 aa37.92■■■■□ 3.66
Suds3-202ENSMUST00000166397 Arhgap5P97393 1501 aa37.9■■■■□ 3.66
Suds3-202ENSMUST00000166397 Mlh3A0A1Y7VMP7 1443 aa37.88■■■■□ 3.65
Suds3-202ENSMUST00000166397 3425401B19RikD3Z1D3 1412 aa37.87■■■■□ 3.65
Suds3-202ENSMUST00000166397 Kdm6bQ5NCY0 1641 aa37.87■■■■□ 3.65
Suds3-202ENSMUST00000166397 UbtfP25976 765 aaKnown RBP37.87■■■■□ 3.65
Suds3-202ENSMUST00000166397 AglF8VPN4 1532 aa37.87■■■■□ 3.65
Suds3-202ENSMUST00000166397 Abca9Q8K449 1623 aa37.86■■■■□ 3.65
Suds3-202ENSMUST00000166397 AdgbG3UZ78 1657 aa37.83■■■■□ 3.65
Suds3-202ENSMUST00000166397 Tdrd9Q14BI7 1383 aa37.82■■■■□ 3.64
Suds3-202ENSMUST00000166397 Gm32742A0A1B0GT42 1604 aa37.82■■■■□ 3.64
Suds3-202ENSMUST00000166397 Caskin1Q6P9K8 1431 aa37.79■■■■□ 3.64
Suds3-202ENSMUST00000166397 Pdcd11Q6NS46 1862 aaKnown RBP37.73■■■■□ 3.63
Suds3-202ENSMUST00000166397 Trappc8E9PWG2 1437 aa37.72■■■■□ 3.63
Suds3-202ENSMUST00000166397 Kidins220E9Q9B7 1793 aa37.7■■■■□ 3.63
Suds3-202ENSMUST00000166397 Abcc3B2RX12 1523 aa37.66■■■■□ 3.62
Suds3-202ENSMUST00000166397 Cfap74Q3UY96 1578 aa37.66■■■■□ 3.62
Suds3-202ENSMUST00000166397 Fndc1E9Q043 1732 aa37.62■■■■□ 3.61
Suds3-202ENSMUST00000166397 Abcc5Q9R1X5 1436 aa37.58■■■■□ 3.61
Suds3-202ENSMUST00000166397 Ncapd3Q6ZQK0 1506 aa37.53■■■■□ 3.6
Suds3-202ENSMUST00000166397 Cdk11bP24788 784 aaKnown RBP37.5■■■■□ 3.59
Suds3-202ENSMUST00000166397 Kiaa0556Q8C753 1610 aa37.49■■■■□ 3.59
Suds3-202ENSMUST00000166397 Plekhh2Q8C115 1491 aa37.49■■■■□ 3.59
Suds3-202ENSMUST00000166397 Cdc42bpbQ7TT50 1713 aa37.47■■■■□ 3.59
Suds3-202ENSMUST00000166397 Sart1Q9Z315 806 aaKnown RBP37.44■■■■□ 3.58
Suds3-202ENSMUST00000166397 Mtus2Q3UHD3 1353 aa37.43■■■■□ 3.58
Suds3-202ENSMUST00000166397 Hecw1Q8K4P8 1604 aa37.42■■■■□ 3.58
Suds3-202ENSMUST00000166397 Naip2Q9QUK4 1447 aa37.4■■■■□ 3.58
Suds3-202ENSMUST00000166397 OvosQ3UU35 1456 aa37.39■■■■□ 3.58
Suds3-202ENSMUST00000166397 Lemd3Q9WU40 921 aa37.38■■■■□ 3.57
Suds3-202ENSMUST00000166397 Chic2Q9D9G3 165 aa37.37■■■■□ 3.57
Suds3-202ENSMUST00000166397 Cabp1Q9JLK7 227 aa37.37■■■■□ 3.57
Suds3-202ENSMUST00000166397 Kdm5cP41230 1554 aa37.36■■■■□ 3.57
Suds3-202ENSMUST00000166397 SphkapQ6NSW3 1687 aa37.34■■■■□ 3.57
Suds3-202ENSMUST00000166397 Hecw2Q6I6G8 1578 aa37.34■■■■□ 3.57
Suds3-202ENSMUST00000166397 Dnajc5gQ8C632 165 aa37.32■■■■□ 3.57
Suds3-202ENSMUST00000166397 Fam50aQ9WV03 339 aaKnown RBP37.31■■■■□ 3.56
Suds3-202ENSMUST00000166397 Mast1Q9R1L5 1570 aa37.3■■■■□ 3.56
Suds3-202ENSMUST00000166397 Fmn2Q9JL04 1578 aa37.29■■■■□ 3.56
Suds3-202ENSMUST00000166397 Ptch1Q61115 1434 aa37.27■■■■□ 3.56
Suds3-202ENSMUST00000166397 Adgrb2Q8CGM1 1561 aa37.27■■■■□ 3.56
Suds3-202ENSMUST00000166397 Synj2Q9D2G5 1434 aa37.27■■■■□ 3.56
Suds3-202ENSMUST00000166397 Kdm3bQ6ZPY7 1562 aa37.26■■■■□ 3.56
Suds3-202ENSMUST00000166397 Il16O54824 1322 aa37.26■■■■□ 3.56
Suds3-202ENSMUST00000166397 Mier1Q5UAK0 511 aa37.25■■■■□ 3.55
Suds3-202ENSMUST00000166397 NefmP08553 848 aa37.25■■■■□ 3.55
Suds3-202ENSMUST00000166397 Dip2cE9PWR4 1557 aa37.24■■■■□ 3.55
Suds3-202ENSMUST00000166397 Cul9Q80TT8 1865 aa37.23■■■■□ 3.55
Suds3-202ENSMUST00000166397 Neurl4Q5NCX5 1563 aa37.21■■■■□ 3.55
Suds3-202ENSMUST00000166397 RereQ80TZ9 1558 aa37.21■■■■□ 3.55
Suds3-202ENSMUST00000166397 Map3k5O35099 1380 aa37.2■■■■□ 3.55
Suds3-202ENSMUST00000166397 Atp10aO54827 1508 aa37.2■■■■□ 3.55
Suds3-202ENSMUST00000166397 UacaQ8CGB3 1411 aa37.2■■■■□ 3.55
Suds3-202ENSMUST00000166397 Yeats2Q3TUF7 1407 aa37.17■■■■□ 3.54
Suds3-202ENSMUST00000166397 Rfx7F8VPJ6 1459 aa37.14■■■■□ 3.54
Suds3-202ENSMUST00000166397 Xrn1P97789 1719 aaKnown RBP37.13■■■■□ 3.53
Suds3-202ENSMUST00000166397 Rrp7aQ9D1C9 280 aaKnown RBP37.12■■■■□ 3.53
Suds3-202ENSMUST00000166397 Adgrl2Q8JZZ7 1487 aa37.11■■■■□ 3.53
Suds3-202ENSMUST00000166397 Nos1Q9Z0J4 1429 aa37.1■■■■□ 3.53
Suds3-202ENSMUST00000166397 Qser1A2BIE1 1698 aa37.09■■■■□ 3.53
Suds3-202ENSMUST00000166397 Dennd4bQ3U1Y4 1499 aa37.08■■■■□ 3.53
Suds3-202ENSMUST00000166397 Mia2Q91ZV0 1396 aa37.05■■■■□ 3.52
Suds3-202ENSMUST00000166397 Fhad1A6PWD2 1420 aa37.03■■■■□ 3.52
Suds3-202ENSMUST00000166397 Prdm16A2A935 1275 aa37.02■■■■□ 3.52
Suds3-202ENSMUST00000166397 Plppr3Q7TPB0 716 aa37.02■■■■□ 3.52
Suds3-202ENSMUST00000166397 Vps8Q0P5W1 1427 aa37■■■■□ 3.51
Suds3-202ENSMUST00000166397 Fhod3Q76LL6 1578 aa37■■■■□ 3.51
Suds3-202ENSMUST00000166397 Ssh2Q5SW75 1423 aa36.98■■■■□ 3.51
Suds3-202ENSMUST00000166397 Kif14L0N7N1 1674 aaKnown RBP36.97■■■■□ 3.51
Suds3-202ENSMUST00000166397 Cdc42bpgQ80UW5 1551 aa36.97■■■■□ 3.51
Suds3-202ENSMUST00000166397 Abca17E9PX95 1733 aa36.97■■■■□ 3.51
Suds3-202ENSMUST00000166397 Zmym4A2A791 1549 aaKnown RBP36.92■■■■□ 3.5
Suds3-202ENSMUST00000166397 Znf518aB2RRF6 1478 aaKnown RBP36.92■■■■□ 3.5
Suds3-202ENSMUST00000166397 NclP09405 707 aaKnown RBP36.92■■■■□ 3.5
Suds3-202ENSMUST00000166397 AlkP97793 1621 aa36.91■■■■□ 3.5
Suds3-202ENSMUST00000166397 Trpm1Q2TV84 1622 aa36.87■■■■□ 3.49
Suds3-202ENSMUST00000166397 NpatQ8BMA5 1420 aa36.87■■■■□ 3.49
Suds3-202ENSMUST00000166397 Zfp644E9QA22 1323 aa36.85■■■■□ 3.49
Suds3-202ENSMUST00000166397 Usp54Q8BL06 1588 aaKnown RBP36.85■■■■□ 3.49
Suds3-202ENSMUST00000166397 Gli2Q0VGT2 1544 aa36.85■■■■□ 3.49
Suds3-202ENSMUST00000166397 Spag9Q58A65 1321 aaKnown RBP36.84■■■■□ 3.49
Suds3-202ENSMUST00000166397 Cfap65Q3V0B4 1847 aa36.84■■■■□ 3.49
Suds3-202ENSMUST00000166397 Alpk3Q924C5 1678 aa36.84■■■■□ 3.49
Suds3-202ENSMUST00000166397 Adamtsl3G3UXC7 1706 aa36.82■■■■□ 3.49
Suds3-202ENSMUST00000166397 Naip6Q9JIB6 1403 aa36.82■■■■□ 3.48
Suds3-202ENSMUST00000166397 Topbp1Q6ZQF0 1515 aa36.79■■■■□ 3.48
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms