RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Zrsr2Q62377 462 aaKnown RBP11.71□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Tpm4Q6IRU2 248 aa11.7□□□□□ -0.54
Col6a5-201ENSMUST00000165165 HnrnpuQ8VEK3 800 aaKnown RBP11.7□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Dnai1Q8C0M8 701 aa11.7□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Tpd52l1O54818 204 aa11.7□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Smarce1O54941 411 aaKnown RBP11.69□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Slc4a3P16283 1227 aa11.69□□□□□ -0.54
Col6a5-201ENSMUST00000165165 VgfQ0VGU4 617 aa11.69□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Ddrgk1Q80WW9 315 aa11.69□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Gm20521D3Z5F7 333 aa11.68□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Grwd1Q810D6 446 aaKnown RBP11.68□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Fbxo2Q80UW2 297 aa11.68□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Card11Q8CIS0 1159 aa11.68□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Pde3bQ61409 1100 aa11.68□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Fam193aQ8CGI1 1231 aaKnown RBP11.68□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Rwdd1Q9CQK7 243 aa11.67□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Ccdc34Q3UI66 367 aa11.67□□□□□ -0.54
Col6a5-201ENSMUST00000165165 MecomP14404 1042 aa11.67□□□□□ -0.54
Col6a5-201ENSMUST00000165165 CrebrfQ8CDG5 640 aaKnown RBP11.66□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Zfp777B9EKF4 885 aa11.66□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Nol10Q5RJG1 687 aaKnown RBP11.66□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Ipo9Q91YE6 1041 aa11.66□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Stag3O70576 1240 aa11.65□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Tpm2P58774 284 aa11.65□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Ncbp3Q8BZR9 615 aaKnown RBP11.65□□□□□ -0.54
Col6a5-201ENSMUST00000165165 Drc7Q6V3W6 876 aa11.65□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Taf3Q5HZG4 932 aa11.64□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Cspp1B2RX88 1205 aa11.64□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Tomm22Q9CPQ3 142 aa11.64□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Mroh3A0A1D5RM54 893 aa11.64□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Sart3Q9JLI8 962 aaKnown RBP11.64□□□□□ -0.55
Col6a5-201ENSMUST00000165165 SlkO54988 1233 aa11.64□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Tpm1P58771 284 aa11.63□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Ush1cQ9ES64 910 aa11.63□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Rtf1A2AQ19 715 aaKnown RBP11.63□□□□□ -0.55
Col6a5-201ENSMUST00000165165 EspnQ9ET47 871 aa11.63□□□□□ -0.55
Col6a5-201ENSMUST00000165165 U2surpQ6NV83 1029 aaKnown RBP11.62□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Kri1Q8VDQ9 704 aaKnown RBP11.62□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Ccer1Q9CQL2 403 aa11.62□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Cwc22Q8C5N3 908 aaKnown RBP11.61□□□□□ -0.55
Col6a5-201ENSMUST00000165165 IbspQ61711 324 aa11.61□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Gabpb2P81069 414 aa11.6□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Q8BT18 775 aa11.6□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Paf1Q8K2T8 535 aa11.6□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Ipo8Q7TMY7 1010 aa11.6□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Rufy1Q8BIJ7 712 aa11.6□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Mfap1aC0HKD8 439 aaKnown RBP11.59□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Mfap1bC0HKD9 439 aaKnown RBP11.59□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Samd1D3YXK1 519 aa11.59□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Tcerg1Q8CGF7 1100 aaKnown RBP11.59□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Znf771Q8BJ90 317 aa11.59□□□□□ -0.55
Col6a5-201ENSMUST00000165165 4933402E13RikQ9D4D2 429 aa11.59□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Ccdc47Q9D024 483 aaKnown RBP11.59□□□□□ -0.55
Col6a5-201ENSMUST00000165165 Chaf1aQ9QWF0 911 aa11.58□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Ipo4Q8VI75 1082 aa11.58□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Supt16hQ920B9 1047 aa11.57□□□□□ -0.56
Col6a5-201ENSMUST00000165165 SafbD3YXK2 937 aaKnown RBP11.57□□□□□ -0.56
Col6a5-201ENSMUST00000165165 MyclP10166 368 aa11.57□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Odf2A3KGV1 830 aaKnown RBP11.57□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Pknox2Q8BG99 474 aa11.57□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Chmp5Q9D7S9 219 aa11.56□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Sf3a1Q8K4Z5 791 aaKnown RBP11.56□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Gtf3c3Q3TMP1 882 aa11.56□□□□□ -0.56
Col6a5-201ENSMUST00000165165 BbxQ8VBW5 907 aa11.56□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Plin1Q8CGN5 517 aa11.55□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Cnga1P29974 684 aa11.55□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Anp32eP97822 260 aaKnown RBP11.55□□□□□ -0.56
Col6a5-201ENSMUST00000165165 GorabQ8BRM2 368 aa11.55□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Hap1O35668 628 aa11.54□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Pnmal2G3X9N3 661 aa11.54□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Gm21969J3QJZ1 289 aa11.54□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Brpf1B2RRD7 1212 aa11.54□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Ubap1lG3UW59 384 aa11.53□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Mex3cQ05A36 652 aaKnown RBP11.53□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Rsph6aQ8CDR2 708 aa11.53□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Krt82Q99M74 516 aa11.53□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Stk24Q99KH8 431 aa11.53□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Znhit6Q3UFB2 460 aaKnown RBP11.52□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Ccdc43Q9CR29 222 aaKnown RBP11.52□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Utp3Q9JI13 469 aaKnown RBP11.52□□□□□ -0.56
Col6a5-201ENSMUST00000165165 Cwc15Q9JHS9 229 aaKnown RBP11.52□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Tmco5bQ80X59 307 aa11.51□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Aebp2Q9Z248 504 aaKnown RBP11.51□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Atp6v1dP57746 247 aa11.51□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Dctn1O08788 1281 aa11.51□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Rsph3aQ3UFY4 516 aa11.51□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Gcom1E9PZ54 550 aa11.5□□□□□ -0.57
Col6a5-201ENSMUST00000165165 MyzapQ3UIJ9 466 aa11.5□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Tnnt1O88346 262 aa11.5□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Q3TQI7 289 aaKnown RBP11.49□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Hdgfl1Q2VPR5 283 aa11.49□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Speer4f1Q9D5Q6 258 aa11.49□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Ipo7Q9EPL8 1038 aaKnown RBP11.49□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Fhad1A6PWD2 1420 aa11.48□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Ralbp1Q62172 648 aa11.48□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Chmp3Q9CQ10 224 aa11.48□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Cluap1Q8R3P7 413 aa11.48□□□□□ -0.57
Col6a5-201ENSMUST00000165165 A0A0U1RNP2 1173 aa11.48□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Ecm2Q5FW85 670 aa11.48□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Znf330Q922H9 316 aa11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 78.5 ms