RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Gtf2e1Q9D0D5 440 aa23,71■■□□□ 1,39
Sort1-203ENSMUST00000135636 NudcO35685 332 aaKnown RBP23,7■■□□□ 1,38
Sort1-203ENSMUST00000135636 Vps53Q8CCB4 832 aa23,69■■□□□ 1,38
Sort1-203ENSMUST00000135636 Tmco5bQ80X59 307 aa23,69■■□□□ 1,38
Sort1-203ENSMUST00000135636 Trim44Q9QXA7 346 aa23,68■■□□□ 1,38
Sort1-203ENSMUST00000135636 Mical1Q8VDP3 1048 aa23,68■■□□□ 1,38
Sort1-203ENSMUST00000135636 Ap3b2Q9JME5 1082 aa23,64■■□□□ 1,38
Sort1-203ENSMUST00000135636 Rundc1Q0VDN7 615 aa23,63■■□□□ 1,37
Sort1-203ENSMUST00000135636 Golga3P55937 1487 aa23,62■■□□□ 1,37
Sort1-203ENSMUST00000135636 Pabpn1Q8CCS6 302 aaKnown RBP23,6■■□□□ 1,37
Sort1-203ENSMUST00000135636 U2af1Q9D883 239 aaKnown RBP23,6■■□□□ 1,37
Sort1-203ENSMUST00000135636 Prm3Q62100 101 aa23,59■■□□□ 1,37
Sort1-203ENSMUST00000135636 Trak1Q6PD31 939 aa23,59■■□□□ 1,37
Sort1-203ENSMUST00000135636 Aebp2Q9Z248 504 aaKnown RBP23,58■■□□□ 1,36
Sort1-203ENSMUST00000135636 Tcerg1Q8CGF7 1100 aaKnown RBP23,57■■□□□ 1,36
Sort1-203ENSMUST00000135636 Dcaf11Q91VU6 549 aa23,57■■□□□ 1,36
Sort1-203ENSMUST00000135636 Hspa5P20029 655 aaKnown RBP23,56■■□□□ 1,36
Sort1-203ENSMUST00000135636 Pcmtd1P59913 357 aa23,56■■□□□ 1,36
Sort1-203ENSMUST00000135636 Speer4f1Q9D5Q6 258 aa23,55■■□□□ 1,36
Sort1-203ENSMUST00000135636 Klf15Q9EPW2 415 aa23,55■■□□□ 1,36
Sort1-203ENSMUST00000135636 Fbln2P37889 1221 aa23,55■■□□□ 1,36
Sort1-203ENSMUST00000135636 Ppm1gQ61074 542 aa23,54■■□□□ 1,36
Sort1-203ENSMUST00000135636 Baz1aO88379 1555 aa23,52■■□□□ 1,36
Sort1-203ENSMUST00000135636 Cwc22Q8C5N3 908 aaKnown RBP23,52■■□□□ 1,36
Sort1-203ENSMUST00000135636 Sugp2Q8CH09 1067 aa23,51■■□□□ 1,35
Sort1-203ENSMUST00000135636 Slc4a1apE9PX68 744 aa23,51■■□□□ 1,35
Sort1-203ENSMUST00000135636 Cabp4Q8VHC5 271 aa23,51■■□□□ 1,35
Sort1-203ENSMUST00000135636 Shroom4Q1W617 1475 aa23,51■■□□□ 1,35
Sort1-203ENSMUST00000135636 Wwc2Q6NXJ0 1187 aa23,5■■□□□ 1,35
Sort1-203ENSMUST00000135636 Noc3lQ8VI84 807 aaKnown RBP23,49■■□□□ 1,35
Sort1-203ENSMUST00000135636 Zfp777B9EKF4 885 aa23,49■■□□□ 1,35
Sort1-203ENSMUST00000135636 Utp14aQ640M1 767 aaKnown RBP23,48■■□□□ 1,35
Sort1-203ENSMUST00000135636 Slc4a3P16283 1227 aa23,48■■□□□ 1,35
Sort1-203ENSMUST00000135636 Fan1Q69ZT1 1020 aa23,48■■□□□ 1,35
Sort1-203ENSMUST00000135636 Pkd2O35245 966 aa23,47■■□□□ 1,35
Sort1-203ENSMUST00000135636 Brpf1B2RRD7 1212 aa23,47■■□□□ 1,35
Sort1-203ENSMUST00000135636 Aebp1Q640N1 1128 aa23,47■■□□□ 1,35
Sort1-203ENSMUST00000135636 Spag9Q58A65 1321 aaKnown RBP23,47■■□□□ 1,35
Sort1-203ENSMUST00000135636 Map7O88735 730 aa23,47■■□□□ 1,35
Sort1-203ENSMUST00000135636 MecomP14404 1042 aa23,47■■□□□ 1,35
Sort1-203ENSMUST00000135636 Fhad1A6PWD2 1420 aa23,46■■□□□ 1,35
Sort1-203ENSMUST00000135636 Sf3b2Q3UJB0 878 aaKnown RBP23,45■■□□□ 1,35
Sort1-203ENSMUST00000135636 Kdm5dQ62240 1548 aa23,45■■□□□ 1,35
Sort1-203ENSMUST00000135636 Cluap1Q8R3P7 413 aa23,45■■□□□ 1,34
Sort1-203ENSMUST00000135636 Pds5bQ4VA53 1446 aaKnown RBP23,45■■□□□ 1,34
Sort1-203ENSMUST00000135636 Casc1Q6TDU8 730 aa23,45■■□□□ 1,34
Sort1-203ENSMUST00000135636 Cabp1Q9JLK7 227 aa23,44■■□□□ 1,34
Sort1-203ENSMUST00000135636 MccE9PWI3 1003 aa23,44■■□□□ 1,34
Sort1-203ENSMUST00000135636 Ccar1Q8CH18 1146 aaKnown RBP23,43■■□□□ 1,34
Sort1-203ENSMUST00000135636 Baz1bQ9Z277 1479 aa23,42■■□□□ 1,34
Sort1-203ENSMUST00000135636 Iffo2Q8R2V2 512 aa23,41■■□□□ 1,34
Sort1-203ENSMUST00000135636 AppP12023 770 aa23,4■■□□□ 1,34
Sort1-203ENSMUST00000135636 Sytl4Q9R0Q1 673 aa23,4■■□□□ 1,34
Sort1-203ENSMUST00000135636 CgnP59242 1191 aa23,4■■□□□ 1,34
Sort1-203ENSMUST00000135636 Shq1Q7TMX5 569 aa23,4■■□□□ 1,34
Sort1-203ENSMUST00000135636 Slc4a10Q5DTL9 1118 aa23,39■■□□□ 1,34
Sort1-203ENSMUST00000135636 Chmp4bQ9D8B3 224 aaKnown RBP23,39■■□□□ 1,34
Sort1-203ENSMUST00000135636 Tmf1B9EKI3 1091 aa23,39■■□□□ 1,34
Sort1-203ENSMUST00000135636 Sart3Q9JLI8 962 aaKnown RBP23,39■■□□□ 1,34
Sort1-203ENSMUST00000135636 Paf1Q8K2T8 535 aa23,38■■□□□ 1,33
Sort1-203ENSMUST00000135636 Ncbp3Q8BZR9 615 aaKnown RBP23,37■■□□□ 1,33
Sort1-203ENSMUST00000135636 Dhx16G3X8X0 1044 aaKnown RBP23,36■■□□□ 1,33
Sort1-203ENSMUST00000135636 Cux2P70298 1426 aa23,36■■□□□ 1,33
Sort1-203ENSMUST00000135636 Sin3aQ60520 1274 aaKnown RBP23,34■■□□□ 1,33
Sort1-203ENSMUST00000135636 Ddx54Q8K4L0 874 aaKnown RBP23,34■■□□□ 1,33
Sort1-203ENSMUST00000135636 Cyb5rlB1AS42 316 aa23,33■■□□□ 1,32
Sort1-203ENSMUST00000135636 Kcnn1Q9EQR3 537 aa23,33■■□□□ 1,32
Sort1-203ENSMUST00000135636 Mink1Q9JM52 1308 aa23,32■■□□□ 1,32
Sort1-203ENSMUST00000135636 Evi5lH3BKQ3 813 aa23,32■■□□□ 1,32
Sort1-203ENSMUST00000135636 BcanQ61361 883 aa23,32■■□□□ 1,32
Sort1-203ENSMUST00000135636 CrebrfQ8CDG5 640 aaKnown RBP23,32■■□□□ 1,32
Sort1-203ENSMUST00000135636 Rock2P70336 1388 aa23,31■■□□□ 1,32
Sort1-203ENSMUST00000135636 Gm21190A0A0G2JGJ6 266 aa23,31■■□□□ 1,32
Sort1-203ENSMUST00000135636 Atf3Q60765 181 aa23,31■■□□□ 1,32
Sort1-203ENSMUST00000135636 Fyb1O35601 819 aa23,3■■□□□ 1,32
Sort1-203ENSMUST00000135636 Dnai2A2AC93 623 aa23,3■■□□□ 1,32
Sort1-203ENSMUST00000135636 Anks4bQ8K3X6 423 aa23,3■■□□□ 1,32
Sort1-203ENSMUST00000135636 Nup155Q99P88 1391 aaKnown RBP23,29■■□□□ 1,32
Sort1-203ENSMUST00000135636 MycnP03966 462 aaKnown RBP23,29■■□□□ 1,32
Sort1-203ENSMUST00000135636 HnrnpuQ8VEK3 800 aaKnown RBP23,29■■□□□ 1,32
Sort1-203ENSMUST00000135636 CrbnQ8C7D2 445 aa23,28■■□□□ 1,32
Sort1-203ENSMUST00000135636 Golga2Q921M4 999 aa23,28■■□□□ 1,32
Sort1-203ENSMUST00000135636 Eva1cP58659 440 aa23,27■■□□□ 1,32
Sort1-203ENSMUST00000135636 Sart1Q9Z315 806 aaKnown RBP23,27■■□□□ 1,32
Sort1-203ENSMUST00000135636 Rwdd1Q9CQK7 243 aa23,27■■□□□ 1,32
Sort1-203ENSMUST00000135636 KnstrnQ9D9Z1 312 aaKnown RBP23,27■■□□□ 1,32
Sort1-203ENSMUST00000135636 Sirt1Q923E4 737 aa23,27■■□□□ 1,32
Sort1-203ENSMUST00000135636 Ripply1Q2WG77 201 aa23,27■■□□□ 1,32
Sort1-203ENSMUST00000135636 Cc2d1aQ8K1A6 943 aa23,26■■□□□ 1,31
Sort1-203ENSMUST00000135636 ArsiQ32KI9 573 aa23,26■■□□□ 1,31
Sort1-203ENSMUST00000135636 Mphosph9A6H5Y1 991 aa23,23■■□□□ 1,31
Sort1-203ENSMUST00000135636 Bcl2l13P59017 434 aa23,22■■□□□ 1,31
Sort1-203ENSMUST00000135636 GorabQ8BRM2 368 aa23,22■■□□□ 1,31
Sort1-203ENSMUST00000135636 Mia2Q91ZV0 1396 aa23,22■■□□□ 1,31
Sort1-203ENSMUST00000135636 Ksr2Q3UVC0 959 aa23,22■■□□□ 1,31
Sort1-203ENSMUST00000135636 CenpjQ569L8 1344 aa23,21■■□□□ 1,31
Sort1-203ENSMUST00000135636 Zpr1Q62384 459 aa23,21■■□□□ 1,31
Sort1-203ENSMUST00000135636 Kri1Q8VDQ9 704 aaKnown RBP23,19■■□□□ 1,3
Sort1-203ENSMUST00000135636 Rbm5Q91YE7 815 aaKnown RBP23,18■■□□□ 1,3
Sort1-203ENSMUST00000135636 Chmp7Q8R1T1 451 aa23,17■■□□□ 1,3
Retrieved 100 of 22,080 RNA–protein pairs in 17,6 ms