RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Eif4g1Q6NZJ6 1600 aaKnown RBP13.53□□□□□ -0.24
Ctc1-202ENSMUST00000116359 Ofd1Q80Z25 1017 aa13.53□□□□□ -0.24
Ctc1-202ENSMUST00000116359 Ppp1r18Q8BQ30 594 aa13.52□□□□□ -0.25
Ctc1-202ENSMUST00000116359 Mroh3A0A1D5RM54 893 aa13.52□□□□□ -0.25
Ctc1-202ENSMUST00000116359 Shroom2A2ALU4 1481 aa13.52□□□□□ -0.25
Ctc1-202ENSMUST00000116359 Camsap1A2AHC3 1581 aa13.51□□□□□ -0.25
Ctc1-202ENSMUST00000116359 Scaf1Q5U4C3 1256 aaKnown RBP13.5□□□□□ -0.25
Ctc1-202ENSMUST00000116359 Eea1Q8BL66 1411 aa13.49□□□□□ -0.25
Ctc1-202ENSMUST00000116359 Gm13695A2AK44 830 aa13.49□□□□□ -0.25
Ctc1-202ENSMUST00000116359 Rad54l2Q99NG0 1466 aa13.49□□□□□ -0.25
Ctc1-202ENSMUST00000116359 Mre11Q61216 706 aa13.47□□□□□ -0.25
Ctc1-202ENSMUST00000116359 Ankrd36D3Z4K0 1415 aa13.47□□□□□ -0.25
Ctc1-202ENSMUST00000116359 Arhgef5E9Q7D5 1581 aa13.47□□□□□ -0.25
Ctc1-202ENSMUST00000116359 Camsap2Q8C1B1 1461 aa13.47□□□□□ -0.25
Ctc1-202ENSMUST00000116359 Pdlim2Q8R1G6 349 aa13.47□□□□□ -0.25
Ctc1-202ENSMUST00000116359 PnisrA2AJT4 805 aaKnown RBP13.46□□□□□ -0.25
Ctc1-202ENSMUST00000116359 Dnai1Q8C0M8 701 aa13.44□□□□□ -0.26
Ctc1-202ENSMUST00000116359 Znf316Q6PGE4 1016 aa13.44□□□□□ -0.26
Ctc1-202ENSMUST00000116359 Col17a1Q07563 1470 aa13.44□□□□□ -0.26
Ctc1-202ENSMUST00000116359 Ttll13A4Q9F6 804 aa13.44□□□□□ -0.26
Ctc1-202ENSMUST00000116359 Rbm10Q99KG3 930 aaKnown RBP13.44□□□□□ -0.26
Ctc1-202ENSMUST00000116359 Fgd6Q69ZL1 1399 aa13.43□□□□□ -0.26
Ctc1-202ENSMUST00000116359 Pcdh10E9PXQ7 1057 aa13.42□□□□□ -0.26
Ctc1-202ENSMUST00000116359 Gm156Q58A37 223 aa13.42□□□□□ -0.26
Ctc1-202ENSMUST00000116359 Cc2d2bA0A286YDU8 1405 aa13.42□□□□□ -0.26
Ctc1-202ENSMUST00000116359 EprsQ8CGC7 1512 aaKnown RBP13.42□□□□□ -0.26
Ctc1-202ENSMUST00000116359 Setd5Q5XJV7 1441 aa13.41□□□□□ -0.26
Ctc1-202ENSMUST00000116359 Zfp91Q62511 572 aa13.41□□□□□ -0.26
Ctc1-202ENSMUST00000116359 B4galnt3Q6L8S8 986 aa13.41□□□□□ -0.26
Ctc1-202ENSMUST00000116359 Fyco1Q8VDC1 1437 aa13.41□□□□□ -0.26
Ctc1-202ENSMUST00000116359 Naip5Q9R016 1403 aa13.41□□□□□ -0.26
Ctc1-202ENSMUST00000116359 Rusc2Q80U22 1514 aa13.4□□□□□ -0.26
Ctc1-202ENSMUST00000116359 Grin2bQ01097 1482 aa13.4□□□□□ -0.26
Ctc1-202ENSMUST00000116359 Disp1Q3TDN0 1521 aa13.4□□□□□ -0.27
Ctc1-202ENSMUST00000116359 PtprkP35822 1457 aa13.39□□□□□ -0.27
Ctc1-202ENSMUST00000116359 BlmO88700 1416 aa13.39□□□□□ -0.27
Ctc1-202ENSMUST00000116359 Erbb3Q61526 1339 aa13.38□□□□□ -0.27
Ctc1-202ENSMUST00000116359 CatipB9EKE5 520 aa13.38□□□□□ -0.27
Ctc1-202ENSMUST00000116359 IbspQ61711 324 aa13.38□□□□□ -0.27
Ctc1-202ENSMUST00000116359 Efcab5A0JP43 1406 aa13.38□□□□□ -0.27
Ctc1-202ENSMUST00000116359 Pprc1Q6NZN1 1644 aa13.38□□□□□ -0.27
Ctc1-202ENSMUST00000116359 Arid3cA6PWV5 409 aa13.38□□□□□ -0.27
Ctc1-202ENSMUST00000116359 CntlnA2AM05 1397 aa13.38□□□□□ -0.27
Ctc1-202ENSMUST00000116359 Tiam1Q60610 1591 aa13.37□□□□□ -0.27
Ctc1-202ENSMUST00000116359 Prkrip1Q9CWV6 186 aaKnown RBP13.37□□□□□ -0.27
Ctc1-202ENSMUST00000116359 Arhgap35Q91YM2 1499 aa13.37□□□□□ -0.27
Ctc1-202ENSMUST00000116359 Mink1Q9JM52 1308 aa13.37□□□□□ -0.27
Ctc1-202ENSMUST00000116359 Paxip1Q6NZQ4 1056 aa13.37□□□□□ -0.27
Ctc1-202ENSMUST00000116359 Phf14Q9D4H9 881 aa13.36□□□□□ -0.27
Ctc1-202ENSMUST00000116359 Soga1E1U8D0 1418 aa13.36□□□□□ -0.27
Ctc1-202ENSMUST00000116359 Spryd3E9Q9B3 442 aa13.35□□□□□ -0.27
Ctc1-202ENSMUST00000116359 Vgll3P85442 326 aa13.34□□□□□ -0.27
Ctc1-202ENSMUST00000116359 Ncoa1P70365 1447 aa13.34□□□□□ -0.27
Ctc1-202ENSMUST00000116359 Fhad1A6PWD2 1420 aa13.33□□□□□ -0.27
Ctc1-202ENSMUST00000116359 NudcO35685 332 aaKnown RBP13.33□□□□□ -0.28
Ctc1-202ENSMUST00000116359 Dbr1Q923B1 550 aa13.32□□□□□ -0.28
Ctc1-202ENSMUST00000116359 TnnQ80Z71 1560 aa13.32□□□□□ -0.28
Ctc1-202ENSMUST00000116359 Ppm1gQ61074 542 aa13.32□□□□□ -0.28
Ctc1-202ENSMUST00000116359 Anp32bQ9EST5 272 aaKnown RBP13.32□□□□□ -0.28
Ctc1-202ENSMUST00000116359 Kif20aP97329 887 aa13.32□□□□□ -0.28
Ctc1-202ENSMUST00000116359 Naip1Q9QWK5 1403 aa13.32□□□□□ -0.28
Ctc1-202ENSMUST00000116359 AqrQ8CFQ3 1481 aaKnown RBP13.31□□□□□ -0.28
Ctc1-202ENSMUST00000116359 Kank1E9Q238 1360 aa13.31□□□□□ -0.28
Ctc1-202ENSMUST00000116359 Dusp27Q148W8 1138 aa13.31□□□□□ -0.28
Ctc1-202ENSMUST00000116359 Ube2uB1AUC4 352 aa13.31□□□□□ -0.28
Ctc1-202ENSMUST00000116359 Adgrl3Q80TS3 1537 aa13.3□□□□□ -0.28
Ctc1-202ENSMUST00000116359 Gapvd1Q6PAR5 1458 aa13.3□□□□□ -0.28
Ctc1-202ENSMUST00000116359 Grin2aP35436 1464 aa13.29□□□□□ -0.28
Ctc1-202ENSMUST00000116359 Mia2Q91ZV0 1396 aa13.29□□□□□ -0.28
Ctc1-202ENSMUST00000116359 3425401B19RikD3Z1D3 1412 aa13.28□□□□□ -0.28
Ctc1-202ENSMUST00000116359 Lmod2Q3UHZ5 550 aa13.28□□□□□ -0.28
Ctc1-202ENSMUST00000116359 Eif2s2Q99L45 331 aaKnown RBP13.28□□□□□ -0.28
Ctc1-202ENSMUST00000116359 Samd9lQ69Z37 1561 aa13.28□□□□□ -0.28
Ctc1-202ENSMUST00000116359 Vps8Q0P5W1 1427 aa13.27□□□□□ -0.29
Ctc1-202ENSMUST00000116359 Irf5P56477 497 aa13.27□□□□□ -0.29
Ctc1-202ENSMUST00000116359 Stard8Q8K031 1019 aa13.27□□□□□ -0.29
Ctc1-202ENSMUST00000116359 TnikP83510 1323 aa13.27□□□□□ -0.29
Ctc1-202ENSMUST00000116359 Tex2Q6ZPJ0 1128 aaKnown RBP13.26□□□□□ -0.29
Ctc1-202ENSMUST00000116359 Dhx57Q6P5D3 1388 aaKnown RBP13.26□□□□□ -0.29
Ctc1-202ENSMUST00000116359 Ythdc2B2RR83 1445 aaKnown RBP13.26□□□□□ -0.29
Ctc1-202ENSMUST00000116359 Nup160Q9Z0W3 1402 aaKnown RBP13.26□□□□□ -0.29
Ctc1-202ENSMUST00000116359 PogkQ80TC5 607 aa13.26□□□□□ -0.29
Ctc1-202ENSMUST00000116359 CadpsQ80TJ1 1355 aa13.25□□□□□ -0.29
Ctc1-202ENSMUST00000116359 ArxO35085 564 aa13.24□□□□□ -0.29
Ctc1-202ENSMUST00000116359 EspnQ9ET47 871 aa13.24□□□□□ -0.29
Ctc1-202ENSMUST00000116359 Rrp12Q6P5B0 1295 aaKnown RBP13.23□□□□□ -0.29
Ctc1-202ENSMUST00000116359 Htatsf1Q8BGC0 757 aa13.23□□□□□ -0.29
Ctc1-202ENSMUST00000116359 TimelessQ9R1X4 1197 aa13.23□□□□□ -0.29
Ctc1-202ENSMUST00000116359 Slx4Q6P1D7 1565 aa13.23□□□□□ -0.29
Ctc1-202ENSMUST00000116359 Nom1Q3UFM5 854 aaKnown RBP13.22□□□□□ -0.29
Ctc1-202ENSMUST00000116359 4933402E13RikQ9D4D2 429 aa13.22□□□□□ -0.29
Ctc1-202ENSMUST00000116359 Cul9Q80TT8 1865 aa13.2□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Neo1P97798 1493 aa13.2□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Zfp444Q3TDV8 331 aaKnown RBP13.2□□□□□ -0.3
Ctc1-202ENSMUST00000116359 MlecQ6ZQI3 291 aaKnown RBP13.2□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Chmp5Q9D7S9 219 aa13.2□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Gm6268A2A3U9 297 aa13.19□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Hsp90ab1P11499 724 aaKnown RBP13.19□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Gm14025A2AP89 1413 aa13.18□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Dhx30Q99PU8 1217 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms