RNA–Protein interactions for RNA: ENSMUST00000111198.8

Cd44-208, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 1,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-208ENSMUST00000111198 Lmo7E9PYF4 1699 aaKnown RBP12.01□□□□□ -0.49
Cd44-208ENSMUST00000111198 Pcgf6Q99NA9 353 aa12.01□□□□□ -0.49
Cd44-208ENSMUST00000111198 Alpk3Q924C5 1678 aa12.01□□□□□ -0.49
Cd44-208ENSMUST00000111198 Magi1Q6RHR9 1471 aa12.01□□□□□ -0.49
Cd44-208ENSMUST00000111198 Setd5Q5XJV7 1441 aa12.01□□□□□ -0.49
Cd44-208ENSMUST00000111198 Arid3aQ62431 601 aa11.98□□□□□ -0.49
Cd44-208ENSMUST00000111198 Pcf11G3X9Z4 1553 aa11.97□□□□□ -0.49
Cd44-208ENSMUST00000111198 Prex2Q3LAC4 1598 aa11.97□□□□□ -0.49
Cd44-208ENSMUST00000111198 A2mQ6GQT1 1474 aa11.97□□□□□ -0.49
Cd44-208ENSMUST00000111198 Eea1Q8BL66 1411 aa11.97□□□□□ -0.49
Cd44-208ENSMUST00000111198 Rnf17Q99MV7 1640 aa11.96□□□□□ -0.5
Cd44-208ENSMUST00000111198 Fam163aQ8CAA5 168 aa11.94□□□□□ -0.5
Cd44-208ENSMUST00000111198 Dnajc5gQ8C632 165 aa11.94□□□□□ -0.5
Cd44-208ENSMUST00000111198 Ncoa3O09000 1398 aa11.93□□□□□ -0.5
Cd44-208ENSMUST00000111198 Dhx57Q6P5D3 1388 aaKnown RBP11.93□□□□□ -0.5
Cd44-208ENSMUST00000111198 Mlh3A0A1Y7VMP7 1443 aa11.92□□□□□ -0.5
Cd44-208ENSMUST00000111198 Mug1P28665 1476 aa11.92□□□□□ -0.5
Cd44-208ENSMUST00000111198 Fam208aQ69ZR9 1610 aaKnown RBP11.92□□□□□ -0.5
Cd44-208ENSMUST00000111198 CatipB9EKE5 520 aa11.92□□□□□ -0.5
Cd44-208ENSMUST00000111198 Ap3b1Q9Z1T1 1105 aa11.92□□□□□ -0.5
Cd44-208ENSMUST00000111198 Cdc42bpaQ3UU96 1719 aa11.91□□□□□ -0.5
Cd44-208ENSMUST00000111198 Kiaa1551Q5DTW7 1521 aa11.9□□□□□ -0.5
Cd44-208ENSMUST00000111198 Abca9Q8K449 1623 aa11.9□□□□□ -0.5
Cd44-208ENSMUST00000111198 Prdm10Q3UTQ7 1184 aa11.9□□□□□ -0.5
Cd44-208ENSMUST00000111198 Prdm16A2A935 1275 aa11.89□□□□□ -0.51
Cd44-208ENSMUST00000111198 Hecw2Q6I6G8 1578 aa11.88□□□□□ -0.51
Cd44-208ENSMUST00000111198 Kiaa0556Q8C753 1610 aa11.87□□□□□ -0.51
Cd44-208ENSMUST00000111198 CntlnA2AM05 1397 aa11.87□□□□□ -0.51
Cd44-208ENSMUST00000111198 Kdm6bQ5NCY0 1641 aa11.87□□□□□ -0.51
Cd44-208ENSMUST00000111198 Synj2Q9D2G5 1434 aa11.86□□□□□ -0.51
Cd44-208ENSMUST00000111198 Naip2Q9QUK4 1447 aa11.84□□□□□ -0.51
Cd44-208ENSMUST00000111198 Taok2Q6ZQ29 1240 aa11.84□□□□□ -0.51
Cd44-208ENSMUST00000111198 MlecQ6ZQI3 291 aaKnown RBP11.84□□□□□ -0.51
Cd44-208ENSMUST00000111198 Senp3Q9EP97 568 aaKnown RBP11.83□□□□□ -0.52
Cd44-208ENSMUST00000111198 Kif14L0N7N1 1674 aaKnown RBP11.83□□□□□ -0.52
Cd44-208ENSMUST00000111198 Peg3Q3URU2 1571 aa11.83□□□□□ -0.52
Cd44-208ENSMUST00000111198 Arhgap5P97393 1501 aa11.83□□□□□ -0.52
Cd44-208ENSMUST00000111198 Gm1043A0A140LJC2 1431 aa11.82□□□□□ -0.52
Cd44-208ENSMUST00000111198 Ncapd3Q6ZQK0 1506 aa11.82□□□□□ -0.52
Cd44-208ENSMUST00000111198 NexmifQ5DTT1 1515 aa11.81□□□□□ -0.52
Cd44-208ENSMUST00000111198 Qser1A2BIE1 1698 aa11.81□□□□□ -0.52
Cd44-208ENSMUST00000111198 Lmod2Q3UHZ5 550 aa11.79□□□□□ -0.52
Cd44-208ENSMUST00000111198 OvosQ3UU35 1456 aa11.79□□□□□ -0.52
Cd44-208ENSMUST00000111198 Kidins220E9Q9B7 1793 aa11.78□□□□□ -0.52
Cd44-208ENSMUST00000111198 Cul9Q80TT8 1865 aa11.78□□□□□ -0.52
Cd44-208ENSMUST00000111198 Brwd3A2AHJ4 1799 aa11.78□□□□□ -0.52
Cd44-208ENSMUST00000111198 Lemd3Q9WU40 921 aa11.78□□□□□ -0.52
Cd44-208ENSMUST00000111198 Slc4a1apE9PX68 744 aa11.77□□□□□ -0.53
Cd44-208ENSMUST00000111198 Naip1Q9QWK5 1403 aa11.77□□□□□ -0.53
Cd44-208ENSMUST00000111198 Tiam1Q60610 1591 aa11.76□□□□□ -0.53
Cd44-208ENSMUST00000111198 Pdcd11Q6NS46 1862 aaKnown RBP11.76□□□□□ -0.53
Cd44-208ENSMUST00000111198 Kdm5cP41230 1554 aa11.75□□□□□ -0.53
Cd44-208ENSMUST00000111198 Adamtsl3G3UXC7 1706 aa11.75□□□□□ -0.53
Cd44-208ENSMUST00000111198 Cfap74Q3UY96 1578 aa11.74□□□□□ -0.53
Cd44-208ENSMUST00000111198 Gm32742A0A1B0GT42 1604 aa11.74□□□□□ -0.53
Cd44-208ENSMUST00000111198 Abcc3B2RX12 1523 aa11.73□□□□□ -0.53
Cd44-208ENSMUST00000111198 Dip2cE9PWR4 1557 aa11.73□□□□□ -0.53
Cd44-208ENSMUST00000111198 Trappc8E9PWG2 1437 aa11.73□□□□□ -0.53
Cd44-208ENSMUST00000111198 Yeats2Q3TUF7 1407 aa11.73□□□□□ -0.53
Cd44-208ENSMUST00000111198 Ptch1Q61115 1434 aa11.73□□□□□ -0.53
Cd44-208ENSMUST00000111198 Atp10aO54827 1508 aa11.73□□□□□ -0.53
Cd44-208ENSMUST00000111198 RereQ80TZ9 1558 aa11.73□□□□□ -0.53
Cd44-208ENSMUST00000111198 Zmym4A2A791 1549 aaKnown RBP11.72□□□□□ -0.53
Cd44-208ENSMUST00000111198 Tdrd9Q14BI7 1383 aa11.72□□□□□ -0.53
Cd44-208ENSMUST00000111198 NpatQ8BMA5 1420 aa11.72□□□□□ -0.53
Cd44-208ENSMUST00000111198 Cyb5rlB1AS42 316 aa11.72□□□□□ -0.53
Cd44-208ENSMUST00000111198 Adcy10Q8C0T9 1614 aa11.72□□□□□ -0.53
Cd44-208ENSMUST00000111198 Caskin1Q6P9K8 1431 aa11.71□□□□□ -0.53
Cd44-208ENSMUST00000111198 Neurl4Q5NCX5 1563 aa11.7□□□□□ -0.54
Cd44-208ENSMUST00000111198 Supt5hO55201 1082 aaKnown RBP11.69□□□□□ -0.54
Cd44-208ENSMUST00000111198 Lmtk2Q3TYD6 1471 aa11.69□□□□□ -0.54
Cd44-208ENSMUST00000111198 Camsap2Q8C1B1 1461 aa11.69□□□□□ -0.54
Cd44-208ENSMUST00000111198 Dmrt2Q8BG36 561 aa11.68□□□□□ -0.54
Cd44-208ENSMUST00000111198 Ccnb3Q810T2 1396 aa11.67□□□□□ -0.54
Cd44-208ENSMUST00000111198 Arhgef40Q3UPH7 1517 aa11.66□□□□□ -0.54
Cd44-208ENSMUST00000111198 PtprmP28828 1452 aa11.66□□□□□ -0.54
Cd44-208ENSMUST00000111198 Cfap65Q3V0B4 1847 aa11.65□□□□□ -0.54
Cd44-208ENSMUST00000111198 Sart1Q9Z315 806 aaKnown RBP11.65□□□□□ -0.54
Cd44-208ENSMUST00000111198 Cdc42bpbQ7TT50 1713 aa11.65□□□□□ -0.54
Cd44-208ENSMUST00000111198 Hecw1Q8K4P8 1604 aa11.65□□□□□ -0.55
Cd44-208ENSMUST00000111198 Supt6hQ62383 1726 aaKnown RBP11.64□□□□□ -0.55
Cd44-208ENSMUST00000111198 Ercc6l2Q9JIM3 1537 aa11.64□□□□□ -0.55
Cd44-208ENSMUST00000111198 Safb2Q80YR5 991 aaKnown RBP11.64□□□□□ -0.55
Cd44-208ENSMUST00000111198 Cdk11bP24788 784 aaKnown RBP11.63□□□□□ -0.55
Cd44-208ENSMUST00000111198 MyclP10166 368 aa11.62□□□□□ -0.55
Cd44-208ENSMUST00000111198 NefmP08553 848 aa11.61□□□□□ -0.55
Cd44-208ENSMUST00000111198 Cdc42bpgQ80UW5 1551 aa11.61□□□□□ -0.55
Cd44-208ENSMUST00000111198 Trpm1Q2TV84 1622 aa11.6□□□□□ -0.55
Cd44-208ENSMUST00000111198 Talpid3E9PV87 1520 aa11.6□□□□□ -0.55
Cd44-208ENSMUST00000111198 Vsig10D3YX43 558 aa11.59□□□□□ -0.55
Cd44-208ENSMUST00000111198 Dennd4bQ3U1Y4 1499 aa11.59□□□□□ -0.55
Cd44-208ENSMUST00000111198 Las1lA2BE28 776 aaKnown RBP11.59□□□□□ -0.55
Cd44-208ENSMUST00000111198 Fhod3Q76LL6 1578 aa11.58□□□□□ -0.56
Cd44-208ENSMUST00000111198 UbtfP25976 765 aaKnown RBP11.58□□□□□ -0.56
Cd44-208ENSMUST00000111198 Abca6Q8K441 1624 aa11.57□□□□□ -0.56
Cd44-208ENSMUST00000111198 Map3k5O35099 1380 aa11.57□□□□□ -0.56
Cd44-208ENSMUST00000111198 Nos1Q9Z0J4 1429 aa11.57□□□□□ -0.56
Cd44-208ENSMUST00000111198 Ahdc1Q6PAL7 1594 aaKnown RBP11.57□□□□□ -0.56
Cd44-208ENSMUST00000111198 SphkapQ6NSW3 1687 aa11.56□□□□□ -0.56
Cd44-208ENSMUST00000111198 Myom2Q14BI5 1463 aa11.56□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms