RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Armcx1Q9CX83 456 aa13.48□□□□□ -0.25
Vcan-202ENSMUST00000109544 Dnai2A2AC93 623 aa13.48□□□□□ -0.25
Vcan-202ENSMUST00000109544 Stag3O70576 1240 aa13.48□□□□□ -0.25
Vcan-202ENSMUST00000109544 Becn1O88597 448 aa13.48□□□□□ -0.25
Vcan-202ENSMUST00000109544 Pcmtd1P59913 357 aa13.48□□□□□ -0.25
Vcan-202ENSMUST00000109544 Anapc15P60007 132 aa13.47□□□□□ -0.25
Vcan-202ENSMUST00000109544 Atp6v1dP57746 247 aa13.47□□□□□ -0.25
Vcan-202ENSMUST00000109544 Plppr3Q7TPB0 716 aa13.47□□□□□ -0.25
Vcan-202ENSMUST00000109544 Kiaa0754Q69ZZ9 979 aa13.46□□□□□ -0.25
Vcan-202ENSMUST00000109544 VgfQ0VGU4 617 aa13.46□□□□□ -0.25
Vcan-202ENSMUST00000109544 Ccdc18Q640L5 1455 aa13.45□□□□□ -0.26
Vcan-202ENSMUST00000109544 SafbD3YXK2 937 aaKnown RBP13.45□□□□□ -0.26
Vcan-202ENSMUST00000109544 Zscan21Q07231 555 aa13.44□□□□□ -0.26
Vcan-202ENSMUST00000109544 Trim30aP15533 496 aa13.43□□□□□ -0.26
Vcan-202ENSMUST00000109544 Iffo2Q8R2V2 512 aa13.43□□□□□ -0.26
Vcan-202ENSMUST00000109544 Rassf8Q8CJ96 419 aa13.42□□□□□ -0.26
Vcan-202ENSMUST00000109544 Glipr1l2Q9CQ35 332 aa13.41□□□□□ -0.26
Vcan-202ENSMUST00000109544 Speer4f1Q9D5Q6 258 aa13.41□□□□□ -0.26
Vcan-202ENSMUST00000109544 Rtf1A2AQ19 715 aaKnown RBP13.41□□□□□ -0.26
Vcan-202ENSMUST00000109544 Rrp7aQ9D1C9 280 aaKnown RBP13.4□□□□□ -0.26
Vcan-202ENSMUST00000109544 Tmf1B9EKI3 1091 aa13.4□□□□□ -0.26
Vcan-202ENSMUST00000109544 Ush1cQ9ES64 910 aa13.4□□□□□ -0.26
Vcan-202ENSMUST00000109544 1700019A02RikA0A087WPV9 146 aa13.4□□□□□ -0.26
Vcan-202ENSMUST00000109544 Tpm3P21107 285 aaKnown RBP13.39□□□□□ -0.27
Vcan-202ENSMUST00000109544 Slc4a3P16283 1227 aa13.39□□□□□ -0.27
Vcan-202ENSMUST00000109544 Kif15Q6P9L6 1387 aa13.38□□□□□ -0.27
Vcan-202ENSMUST00000109544 CgnP59242 1191 aa13.37□□□□□ -0.27
Vcan-202ENSMUST00000109544 Gtf3c3Q3TMP1 882 aa13.37□□□□□ -0.27
Vcan-202ENSMUST00000109544 Cgnl1Q6AW69 1298 aa13.37□□□□□ -0.27
Vcan-202ENSMUST00000109544 Rtn4Q99P72 1162 aaKnown RBP13.37□□□□□ -0.27
Vcan-202ENSMUST00000109544 AampJ3QN89 436 aa13.36□□□□□ -0.27
Vcan-202ENSMUST00000109544 Clstn1Q9EPL2 979 aa13.36□□□□□ -0.27
Vcan-202ENSMUST00000109544 Rsph3aQ3UFY4 516 aa13.35□□□□□ -0.27
Vcan-202ENSMUST00000109544 MecomP14404 1042 aa13.35□□□□□ -0.27
Vcan-202ENSMUST00000109544 Exoc6Q8R313 802 aa13.34□□□□□ -0.27
Vcan-202ENSMUST00000109544 Mfap1aC0HKD8 439 aaKnown RBP13.34□□□□□ -0.27
Vcan-202ENSMUST00000109544 Mfap1bC0HKD9 439 aaKnown RBP13.34□□□□□ -0.27
Vcan-202ENSMUST00000109544 Stk24Q99KH8 431 aa13.34□□□□□ -0.27
Vcan-202ENSMUST00000109544 Rundc1Q0VDN7 615 aa13.34□□□□□ -0.27
Vcan-202ENSMUST00000109544 Golga2Q921M4 999 aa13.33□□□□□ -0.28
Vcan-202ENSMUST00000109544 Hspa5P20029 655 aaKnown RBP13.32□□□□□ -0.28
Vcan-202ENSMUST00000109544 Gtf2e1Q9D0D5 440 aa13.32□□□□□ -0.28
Vcan-202ENSMUST00000109544 NacadQ5SWP3 1504 aa13.32□□□□□ -0.28
Vcan-202ENSMUST00000109544 CntlnA2AM05 1397 aa13.32□□□□□ -0.28
Vcan-202ENSMUST00000109544 Arhgap27A2AB59 869 aa13.31□□□□□ -0.28
Vcan-202ENSMUST00000109544 Nol10Q5RJG1 687 aaKnown RBP13.31□□□□□ -0.28
Vcan-202ENSMUST00000109544 Mre11Q61216 706 aa13.31□□□□□ -0.28
Vcan-202ENSMUST00000109544 Pkd2O35245 966 aa13.31□□□□□ -0.28
Vcan-202ENSMUST00000109544 SlkO54988 1233 aa13.3□□□□□ -0.28
Vcan-202ENSMUST00000109544 Ccar1Q8CH18 1146 aaKnown RBP13.3□□□□□ -0.28
Vcan-202ENSMUST00000109544 Rock2P70336 1388 aa13.3□□□□□ -0.28
Vcan-202ENSMUST00000109544 Ftsj3Q9DBE9 838 aaKnown RBP13.3□□□□□ -0.28
Vcan-202ENSMUST00000109544 Ccdc34Q3UI66 367 aa13.3□□□□□ -0.28
Vcan-202ENSMUST00000109544 Baz1aO88379 1555 aa13.29□□□□□ -0.28
Vcan-202ENSMUST00000109544 Spag9Q58A65 1321 aaKnown RBP13.29□□□□□ -0.28
Vcan-202ENSMUST00000109544 Map4P27546 1125 aaKnown RBP13.29□□□□□ -0.28
Vcan-202ENSMUST00000109544 Ylpm1Q9R0I7 1386 aaKnown RBP13.28□□□□□ -0.28
Vcan-202ENSMUST00000109544 U2af1Q9D883 239 aaKnown RBP13.28□□□□□ -0.28
Vcan-202ENSMUST00000109544 U2surpQ6NV83 1029 aaKnown RBP13.28□□□□□ -0.28
Vcan-202ENSMUST00000109544 Sf3a1Q8K4Z5 791 aaKnown RBP13.27□□□□□ -0.28
Vcan-202ENSMUST00000109544 Tpm1P58771 284 aa13.27□□□□□ -0.28
Vcan-202ENSMUST00000109544 Dusp9Q7TNL7 452 aa13.27□□□□□ -0.29
Vcan-202ENSMUST00000109544 Stard8Q8K031 1019 aa13.27□□□□□ -0.29
Vcan-202ENSMUST00000109544 St18Q80TY4 1045 aa13.27□□□□□ -0.29
Vcan-202ENSMUST00000109544 Q3TQI7 289 aaKnown RBP13.26□□□□□ -0.29
Vcan-202ENSMUST00000109544 NgefQ8CHT1 710 aa13.26□□□□□ -0.29
Vcan-202ENSMUST00000109544 Tmco5bQ80X59 307 aa13.26□□□□□ -0.29
Vcan-202ENSMUST00000109544 Ccdc47Q9D024 483 aaKnown RBP13.26□□□□□ -0.29
Vcan-202ENSMUST00000109544 Fyco1Q8VDC1 1437 aa13.26□□□□□ -0.29
Vcan-202ENSMUST00000109544 Cnga1P29974 684 aa13.26□□□□□ -0.29
Vcan-202ENSMUST00000109544 Ercc6F8VPZ5 1481 aa13.25□□□□□ -0.29
Vcan-202ENSMUST00000109544 Ccer1Q9CQL2 403 aa13.25□□□□□ -0.29
Vcan-202ENSMUST00000109544 Fbxo2Q80UW2 297 aa13.25□□□□□ -0.29
Vcan-202ENSMUST00000109544 A0A1L1SQF0 893 aa13.25□□□□□ -0.29
Vcan-202ENSMUST00000109544 Taf3Q5HZG4 932 aa13.24□□□□□ -0.29
Vcan-202ENSMUST00000109544 Cluap1Q8R3P7 413 aa13.24□□□□□ -0.29
Vcan-202ENSMUST00000109544 Ipo7Q9EPL8 1038 aaKnown RBP13.24□□□□□ -0.29
Vcan-202ENSMUST00000109544 Gpatch11Q3UFS4 262 aa13.24□□□□□ -0.29
Vcan-202ENSMUST00000109544 Zrsr2Q62377 462 aaKnown RBP13.24□□□□□ -0.29
Vcan-202ENSMUST00000109544 Tpm2P58774 284 aa13.23□□□□□ -0.29
Vcan-202ENSMUST00000109544 Srek1Q8BZX4 494 aaKnown RBP13.23□□□□□ -0.29
Vcan-202ENSMUST00000109544 CrebrfQ8CDG5 640 aaKnown RBP13.23□□□□□ -0.29
Vcan-202ENSMUST00000109544 Arhgap35Q91YM2 1499 aa13.23□□□□□ -0.29
Vcan-202ENSMUST00000109544 Tpd52l1O54818 204 aa13.22□□□□□ -0.29
Vcan-202ENSMUST00000109544 Taok2Q6ZQ29 1240 aa13.22□□□□□ -0.29
Vcan-202ENSMUST00000109544 Nap1l3Q794H2 544 aa13.22□□□□□ -0.29
Vcan-202ENSMUST00000109544 Kif27Q7M6Z4 1394 aa13.22□□□□□ -0.29
Vcan-202ENSMUST00000109544 Tpm4Q6IRU2 248 aa13.21□□□□□ -0.29
Vcan-202ENSMUST00000109544 GorabQ8BRM2 368 aa13.21□□□□□ -0.29
Vcan-202ENSMUST00000109544 Casq1O09165 405 aa13.2□□□□□ -0.3
Vcan-202ENSMUST00000109544 Filip1lQ6P6L0 1131 aa13.2□□□□□ -0.3
Vcan-202ENSMUST00000109544 Ifit1bl1D3Z6F0 470 aa13.19□□□□□ -0.3
Vcan-202ENSMUST00000109544 Baz1bQ9Z277 1479 aa13.19□□□□□ -0.3
Vcan-202ENSMUST00000109544 Ccdc173A0JLY1 547 aa13.19□□□□□ -0.3
Vcan-202ENSMUST00000109544 Pknox2Q8BG99 474 aa13.19□□□□□ -0.3
Vcan-202ENSMUST00000109544 Evc2Q8K1G2 1220 aa13.18□□□□□ -0.3
Vcan-202ENSMUST00000109544 Dcaf11Q91VU6 549 aa13.18□□□□□ -0.3
Vcan-202ENSMUST00000109544 Mphosph9A6H5Y1 991 aa13.18□□□□□ -0.3
Vcan-202ENSMUST00000109544 Sh3bgrQ9WUZ7 214 aa13.18□□□□□ -0.3
Vcan-202ENSMUST00000109544 Hmgn5Q9JL35 406 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 83.3 ms