RNA–Protein interactions for RNA: ENSMUST00000108804.2

Lime1-202, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

TSL 3 BASIC

Gene Lime1, Length 960 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-202ENSMUST00000108804 CntlnA2AM05 1397 aa16.64■□□□□ 0.26
Lime1-202ENSMUST00000108804 Prex2Q3LAC4 1598 aa16.64■□□□□ 0.25
Lime1-202ENSMUST00000108804 Pcf11G3X9Z4 1553 aa16.64■□□□□ 0.25
Lime1-202ENSMUST00000108804 Lmod2Q3UHZ5 550 aa16.63■□□□□ 0.25
Lime1-202ENSMUST00000108804 Mlh3A0A1Y7VMP7 1443 aa16.62■□□□□ 0.25
Lime1-202ENSMUST00000108804 Alpk3Q924C5 1678 aa16.59■□□□□ 0.25
Lime1-202ENSMUST00000108804 MlecQ6ZQI3 291 aaKnown RBP16.59■□□□□ 0.25
Lime1-202ENSMUST00000108804 Kiaa1551Q5DTW7 1521 aa16.56■□□□□ 0.24
Lime1-202ENSMUST00000108804 Rnf17Q99MV7 1640 aa16.55■□□□□ 0.24
Lime1-202ENSMUST00000108804 Fam208aQ69ZR9 1610 aaKnown RBP16.53■□□□□ 0.24
Lime1-202ENSMUST00000108804 Gm1043A0A140LJC2 1431 aa16.53■□□□□ 0.24
Lime1-202ENSMUST00000108804 Lemd3Q9WU40 921 aa16.52■□□□□ 0.24
Lime1-202ENSMUST00000108804 Synj2Q9D2G5 1434 aa16.52■□□□□ 0.23
Lime1-202ENSMUST00000108804 Abca9Q8K449 1623 aa16.5■□□□□ 0.23
Lime1-202ENSMUST00000108804 Naip1Q9QWK5 1403 aa16.49■□□□□ 0.23
Lime1-202ENSMUST00000108804 Arhgap5P97393 1501 aa16.48■□□□□ 0.23
Lime1-202ENSMUST00000108804 Cdc42bpaQ3UU96 1719 aa16.48■□□□□ 0.23
Lime1-202ENSMUST00000108804 Naip2Q9QUK4 1447 aa16.47■□□□□ 0.23
Lime1-202ENSMUST00000108804 Ncapd3Q6ZQK0 1506 aa16.46■□□□□ 0.23
Lime1-202ENSMUST00000108804 NexmifQ5DTT1 1515 aa16.44■□□□□ 0.22
Lime1-202ENSMUST00000108804 Tdrd9Q14BI7 1383 aa16.43■□□□□ 0.22
Lime1-202ENSMUST00000108804 Hecw2Q6I6G8 1578 aa16.43■□□□□ 0.22
Lime1-202ENSMUST00000108804 OvosQ3UU35 1456 aa16.42■□□□□ 0.22
Lime1-202ENSMUST00000108804 Kdm6bQ5NCY0 1641 aa16.41■□□□□ 0.22
Lime1-202ENSMUST00000108804 Kiaa0556Q8C753 1610 aa16.41■□□□□ 0.22
Lime1-202ENSMUST00000108804 Trappc8E9PWG2 1437 aa16.41■□□□□ 0.22
Lime1-202ENSMUST00000108804 Peg3Q3URU2 1571 aa16.39■□□□□ 0.21
Lime1-202ENSMUST00000108804 Ptch1Q61115 1434 aa16.38■□□□□ 0.21
Lime1-202ENSMUST00000108804 Cyb5rlB1AS42 316 aa16.38■□□□□ 0.21
Lime1-202ENSMUST00000108804 Yeats2Q3TUF7 1407 aa16.37■□□□□ 0.21
Lime1-202ENSMUST00000108804 Sart1Q9Z315 806 aaKnown RBP16.37■□□□□ 0.21
Lime1-202ENSMUST00000108804 Tiam1Q60610 1591 aa16.37■□□□□ 0.21
Lime1-202ENSMUST00000108804 Ccnb3Q810T2 1396 aa16.37■□□□□ 0.21
Lime1-202ENSMUST00000108804 Caskin1Q6P9K8 1431 aa16.35■□□□□ 0.21
Lime1-202ENSMUST00000108804 Atp10aO54827 1508 aa16.35■□□□□ 0.21
Lime1-202ENSMUST00000108804 Cdk11bP24788 784 aaKnown RBP16.34■□□□□ 0.21
Lime1-202ENSMUST00000108804 NpatQ8BMA5 1420 aa16.34■□□□□ 0.21
Lime1-202ENSMUST00000108804 Kidins220E9Q9B7 1793 aa16.33■□□□□ 0.21
Lime1-202ENSMUST00000108804 Safb2Q80YR5 991 aaKnown RBP16.33■□□□□ 0.2
Lime1-202ENSMUST00000108804 Abcc3B2RX12 1523 aa16.33■□□□□ 0.2
Lime1-202ENSMUST00000108804 Qser1A2BIE1 1698 aa16.31■□□□□ 0.2
Lime1-202ENSMUST00000108804 Kif14L0N7N1 1674 aaKnown RBP16.31■□□□□ 0.2
Lime1-202ENSMUST00000108804 Cfap74Q3UY96 1578 aa16.31■□□□□ 0.2
Lime1-202ENSMUST00000108804 Lmtk2Q3TYD6 1471 aa16.31■□□□□ 0.2
Lime1-202ENSMUST00000108804 Kdm5cP41230 1554 aa16.3■□□□□ 0.2
Lime1-202ENSMUST00000108804 MyclP10166 368 aa16.3■□□□□ 0.2
Lime1-202ENSMUST00000108804 Adcy10Q8C0T9 1614 aa16.3■□□□□ 0.2
Lime1-202ENSMUST00000108804 Dip2cE9PWR4 1557 aa16.29■□□□□ 0.2
Lime1-202ENSMUST00000108804 Arhgef40Q3UPH7 1517 aa16.29■□□□□ 0.2
Lime1-202ENSMUST00000108804 Gm32742A0A1B0GT42 1604 aa16.28■□□□□ 0.2
Lime1-202ENSMUST00000108804 Brwd3A2AHJ4 1799 aa16.26■□□□□ 0.19
Lime1-202ENSMUST00000108804 Pdcd11Q6NS46 1862 aaKnown RBP16.26■□□□□ 0.19
Lime1-202ENSMUST00000108804 RereQ80TZ9 1558 aa16.26■□□□□ 0.19
Lime1-202ENSMUST00000108804 Adamtsl3G3UXC7 1706 aa16.25■□□□□ 0.19
Lime1-202ENSMUST00000108804 Zmym4A2A791 1549 aaKnown RBP16.24■□□□□ 0.19
Lime1-202ENSMUST00000108804 Camsap2Q8C1B1 1461 aa16.22■□□□□ 0.19
Lime1-202ENSMUST00000108804 Map3k5O35099 1380 aa16.22■□□□□ 0.19
Lime1-202ENSMUST00000108804 Neurl4Q5NCX5 1563 aa16.21■□□□□ 0.19
Lime1-202ENSMUST00000108804 PtprmP28828 1452 aa16.21■□□□□ 0.19
Lime1-202ENSMUST00000108804 Afap1Q80YS6 731 aa16.19■□□□□ 0.18
Lime1-202ENSMUST00000108804 Rrp7aQ9D1C9 280 aaKnown RBP16.18■□□□□ 0.18
Lime1-202ENSMUST00000108804 Dennd4bQ3U1Y4 1499 aa16.16■□□□□ 0.18
Lime1-202ENSMUST00000108804 Cul9Q80TT8 1865 aa16.16■□□□□ 0.18
Lime1-202ENSMUST00000108804 Prdm16A2A935 1275 aa16.16■□□□□ 0.18
Lime1-202ENSMUST00000108804 Cdc42bpbQ7TT50 1713 aa16.16■□□□□ 0.18
Lime1-202ENSMUST00000108804 Nos1Q9Z0J4 1429 aa16.15■□□□□ 0.18
Lime1-202ENSMUST00000108804 Ercc6l2Q9JIM3 1537 aa16.14■□□□□ 0.17
Lime1-202ENSMUST00000108804 Cfap65Q3V0B4 1847 aa16.12■□□□□ 0.17
Lime1-202ENSMUST00000108804 Abcc5Q9R1X5 1436 aa16.12■□□□□ 0.17
Lime1-202ENSMUST00000108804 Mtus2Q3UHD3 1353 aa16.12■□□□□ 0.17
Lime1-202ENSMUST00000108804 Hecw1Q8K4P8 1604 aa16.12■□□□□ 0.17
Lime1-202ENSMUST00000108804 Ahdc1Q6PAL7 1594 aaKnown RBP16.1■□□□□ 0.17
Lime1-202ENSMUST00000108804 Kif3bQ61771 747 aa16.1■□□□□ 0.17
Lime1-202ENSMUST00000108804 Cabp1Q9JLK7 227 aa16.09■□□□□ 0.17
Lime1-202ENSMUST00000108804 Naip6Q9JIB6 1403 aa16.09■□□□□ 0.17
Lime1-202ENSMUST00000108804 Cdc42bpgQ80UW5 1551 aa16.09■□□□□ 0.17
Lime1-202ENSMUST00000108804 Fhod3Q76LL6 1578 aa16.06■□□□□ 0.16
Lime1-202ENSMUST00000108804 Talpid3E9PV87 1520 aa16.06■□□□□ 0.16
Lime1-202ENSMUST00000108804 Gli2Q0VGT2 1544 aa16.06■□□□□ 0.16
Lime1-202ENSMUST00000108804 Myom2Q14BI5 1463 aa16.06■□□□□ 0.16
Lime1-202ENSMUST00000108804 Rsph4aQ8BYM7 716 aa16.06■□□□□ 0.16
Lime1-202ENSMUST00000108804 Znf518aB2RRF6 1478 aaKnown RBP16.05■□□□□ 0.16
Lime1-202ENSMUST00000108804 Plekhh2Q8C115 1491 aa16.05■□□□□ 0.16
Lime1-202ENSMUST00000108804 Chic2Q9D9G3 165 aa16.05■□□□□ 0.16
Lime1-202ENSMUST00000108804 3425401B19RikD3Z1D3 1412 aa16.04■□□□□ 0.16
Lime1-202ENSMUST00000108804 Il16O54824 1322 aa16.03■□□□□ 0.16
Lime1-202ENSMUST00000108804 Supt6hQ62383 1726 aaKnown RBP16.02■□□□□ 0.16
Lime1-202ENSMUST00000108804 Spag9Q58A65 1321 aaKnown RBP16.02■□□□□ 0.16
Lime1-202ENSMUST00000108804 Trpm1Q2TV84 1622 aa16.01■□□□□ 0.15
Lime1-202ENSMUST00000108804 Abca6Q8K441 1624 aa16.01■□□□□ 0.15
Lime1-202ENSMUST00000108804 Mast1Q9R1L5 1570 aa16.01■□□□□ 0.15
Lime1-202ENSMUST00000108804 Zbtb7cQ8VCZ7 619 aa16.01■□□□□ 0.15
Lime1-202ENSMUST00000108804 SphkapQ6NSW3 1687 aa16■□□□□ 0.15
Lime1-202ENSMUST00000108804 Trpm2Q91YD4 1506 aa15.99■□□□□ 0.15
Lime1-202ENSMUST00000108804 4930407I10RikD3Z5T8 1512 aa15.99■□□□□ 0.15
Lime1-202ENSMUST00000108804 Fmn2Q9JL04 1578 aa15.98■□□□□ 0.15
Lime1-202ENSMUST00000108804 Adgrl2Q8JZZ7 1487 aa15.96■□□□□ 0.14
Lime1-202ENSMUST00000108804 Naip5Q9R016 1403 aa15.95■□□□□ 0.14
Lime1-202ENSMUST00000108804 Gm13697A2AK42 830 aa15.95■□□□□ 0.14
Lime1-202ENSMUST00000108804 Xrn1P97789 1719 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms