RNA–Protein interactions for RNA: ENSMUST00000108804.2

Lime1-202, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

TSL 3 BASIC

Gene Lime1, Length 960 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-202ENSMUST00000108804 Gm35339A0A140LHH9 1649 aa23.7■■□□□ 1.39
Lime1-202ENSMUST00000108804 NischQ80TM9 1593 aa23.49■■□□□ 1.35
Lime1-202ENSMUST00000108804 Abcc8B2RUS7 1588 aa22.73■■□□□ 1.23
Lime1-202ENSMUST00000108804 Abcc9P70170 1546 aa22.67■■□□□ 1.22
Lime1-202ENSMUST00000108804 ScribQ80U72 1612 aa21.91■■□□□ 1.1
Lime1-202ENSMUST00000108804 NacadQ5SWP3 1504 aa21.29■■□□□ 1
Lime1-202ENSMUST00000108804 Kdm5dQ62240 1548 aa21.2■□□□□ 0.98
Lime1-202ENSMUST00000108804 Dcaf1Q80TR8 1506 aa20.87■□□□□ 0.93
Lime1-202ENSMUST00000108804 Sycp2Q9CUU3 1500 aa20.87■□□□□ 0.93
Lime1-202ENSMUST00000108804 BicraF8VPZ9 1578 aa20.57■□□□□ 0.88
Lime1-202ENSMUST00000108804 Rb1cc1Q9ESK9 1588 aa20.42■□□□□ 0.86
Lime1-202ENSMUST00000108804 Rhox8Q6VSS7 320 aa20.37■□□□□ 0.85
Lime1-202ENSMUST00000108804 Dnajc5bQ9CQ94 199 aa20.29■□□□□ 0.84
Lime1-202ENSMUST00000108804 Baz1aO88379 1555 aa20.15■□□□□ 0.82
Lime1-202ENSMUST00000108804 Crybg2B7ZCC2 1516 aa20.13■□□□□ 0.81
Lime1-202ENSMUST00000108804 Pds5bQ4VA53 1446 aaKnown RBP20.08■□□□□ 0.8
Lime1-202ENSMUST00000108804 Ccdc180J3QNE4 1664 aa20.02■□□□□ 0.8
Lime1-202ENSMUST00000108804 Zcchc6Q5BLK4 1491 aaKnown RBP19.93■□□□□ 0.78
Lime1-202ENSMUST00000108804 Atad2bE9Q166 1460 aaKnown RBP19.86■□□□□ 0.77
Lime1-202ENSMUST00000108804 Thoc2B1AZI6 1594 aaKnown RBP19.83■□□□□ 0.77
Lime1-202ENSMUST00000108804 Cecr2E9Q2Z1 1453 aa19.6■□□□□ 0.73
Lime1-202ENSMUST00000108804 Ercc6F8VPZ5 1481 aa19.6■□□□□ 0.73
Lime1-202ENSMUST00000108804 Smarca4Q3TKT4 1613 aaKnown RBP19.6■□□□□ 0.73
Lime1-202ENSMUST00000108804 Smarca2Q6DIC0 1577 aa19.59■□□□□ 0.73
Lime1-202ENSMUST00000108804 Cc2d2aQ8CFW7 1633 aa19.55■□□□□ 0.72
Lime1-202ENSMUST00000108804 Iqgap2Q3UQ44 1575 aa19.5■□□□□ 0.71
Lime1-202ENSMUST00000108804 Fam135aQ6NS59 1506 aa19.39■□□□□ 0.69
Lime1-202ENSMUST00000108804 Frmpd1A2AKB4 1549 aa19.38■□□□□ 0.69
Lime1-202ENSMUST00000108804 Wdr62Q3U3T8 1523 aa19.36■□□□□ 0.69
Lime1-202ENSMUST00000108804 Phldb1Q6PDH0 1371 aaKnown RBP19.35■□□□□ 0.69
Lime1-202ENSMUST00000108804 Ubl4bQ9CQ84 188 aa19.26■□□□□ 0.67
Lime1-202ENSMUST00000108804 Baz1bQ9Z277 1479 aa19.17■□□□□ 0.66
Lime1-202ENSMUST00000108804 CftrP26361 1476 aa19.12■□□□□ 0.65
Lime1-202ENSMUST00000108804 Ccdc136Q3TVA9 1136 aa19.11■□□□□ 0.65
Lime1-202ENSMUST00000108804 Brd4Q9ESU6 1400 aaKnown RBP19.07■□□□□ 0.64
Lime1-202ENSMUST00000108804 Synj1Q8CHC4 1574 aa19.02■□□□□ 0.64
Lime1-202ENSMUST00000108804 Rtl1Q7M732 1744 aa19.01■□□□□ 0.63
Lime1-202ENSMUST00000108804 Cttnbp2B9EJA2 1648 aa19■□□□□ 0.63
Lime1-202ENSMUST00000108804 Mrc2Q64449 1479 aa18.99■□□□□ 0.63
Lime1-202ENSMUST00000108804 Unc13aQ4KUS2 1712 aa18.96■□□□□ 0.63
Lime1-202ENSMUST00000108804 Esf1Q3V1V3 845 aaKnown RBP18.91■□□□□ 0.62
Lime1-202ENSMUST00000108804 Trim41Q5NCC3 630 aa18.8■□□□□ 0.6
Lime1-202ENSMUST00000108804 Rsf1E9PWW9 1441 aaKnown RBP18.73■□□□□ 0.59
Lime1-202ENSMUST00000108804 Kif15Q6P9L6 1387 aa18.71■□□□□ 0.59
Lime1-202ENSMUST00000108804 Cux2P70298 1426 aa18.71■□□□□ 0.59
Lime1-202ENSMUST00000108804 Npm1Q61937 292 aaKnown RBP18.59■□□□□ 0.57
Lime1-202ENSMUST00000108804 Lamc3Q9R0B6 1581 aa18.53■□□□□ 0.56
Lime1-202ENSMUST00000108804 Lrriq1Q0P5X1 1673 aa18.5■□□□□ 0.55
Lime1-202ENSMUST00000108804 Kif21aQ9QXL2 1672 aa18.46■□□□□ 0.55
Lime1-202ENSMUST00000108804 Dnajc5P60904 198 aa18.45■□□□□ 0.54
Lime1-202ENSMUST00000108804 Cep164Q5DU05 1446 aa18.44■□□□□ 0.54
Lime1-202ENSMUST00000108804 Il27Q8K3I6 234 aa18.39■□□□□ 0.53
Lime1-202ENSMUST00000108804 Cngb1E1AZ71 1325 aa18.37■□□□□ 0.53
Lime1-202ENSMUST00000108804 Golga3P55937 1487 aa18.34■□□□□ 0.53
Lime1-202ENSMUST00000108804 Ccdc18Q640L5 1455 aa18.32■□□□□ 0.52
Lime1-202ENSMUST00000108804 Dhx29Q6PGC1 1365 aaKnown RBP18.31■□□□□ 0.52
Lime1-202ENSMUST00000108804 LrpprcQ6PB66 1392 aaKnown RBP18.29■□□□□ 0.52
Lime1-202ENSMUST00000108804 Plb1Q3TTY0 1478 aa18.26■□□□□ 0.51
Lime1-202ENSMUST00000108804 TnnQ80Z71 1560 aa18.25■□□□□ 0.51
Lime1-202ENSMUST00000108804 Urb2E9Q7L1 1524 aaKnown RBP18.25■□□□□ 0.51
Lime1-202ENSMUST00000108804 Top2bQ64511 1612 aa18.24■□□□□ 0.51
Lime1-202ENSMUST00000108804 Eif4g3Q80XI3 1579 aaKnown RBP18.24■□□□□ 0.51
Lime1-202ENSMUST00000108804 Camsap1A2AHC3 1581 aa18.18■□□□□ 0.5
Lime1-202ENSMUST00000108804 Fmn1Q05860 1466 aa18.14■□□□□ 0.5
Lime1-202ENSMUST00000108804 Shroom2A2ALU4 1481 aa18.14■□□□□ 0.49
Lime1-202ENSMUST00000108804 PogzQ8BZH4 1409 aaKnown RBP18.13■□□□□ 0.49
Lime1-202ENSMUST00000108804 Crocc2F6XLV1 1638 aa18.12■□□□□ 0.49
Lime1-202ENSMUST00000108804 Ift140E9PY46 1464 aa18.07■□□□□ 0.48
Lime1-202ENSMUST00000108804 Pabpn1Q8CCS6 302 aaKnown RBP18.06■□□□□ 0.48
Lime1-202ENSMUST00000108804 Duox2A2AQ99 1517 aa18.04■□□□□ 0.48
Lime1-202ENSMUST00000108804 Grin2bQ01097 1482 aa17.98■□□□□ 0.47
Lime1-202ENSMUST00000108804 Rusc2Q80U22 1514 aa17.96■□□□□ 0.47
Lime1-202ENSMUST00000108804 Disp1Q3TDN0 1521 aa17.95■□□□□ 0.46
Lime1-202ENSMUST00000108804 Pelp1Q9DBD5 1123 aaKnown RBP17.94■□□□□ 0.46
Lime1-202ENSMUST00000108804 Col17a1Q07563 1470 aa17.93■□□□□ 0.46
Lime1-202ENSMUST00000108804 Efcab5A0JP43 1406 aa17.92■□□□□ 0.46
Lime1-202ENSMUST00000108804 Cc2d2bA0A286YDU8 1405 aa17.85■□□□□ 0.45
Lime1-202ENSMUST00000108804 Ccdc88bQ4QRL3 1481 aa17.85■□□□□ 0.45
Lime1-202ENSMUST00000108804 Nup160Q9Z0W3 1402 aaKnown RBP17.84■□□□□ 0.45
Lime1-202ENSMUST00000108804 Samd9lQ69Z37 1561 aa17.82■□□□□ 0.44
Lime1-202ENSMUST00000108804 Chic1Q8CBW7 227 aa17.8■□□□□ 0.44
Lime1-202ENSMUST00000108804 Rad54l2Q99NG0 1466 aa17.8■□□□□ 0.44
Lime1-202ENSMUST00000108804 NrkQ9R0G8 1455 aa17.77■□□□□ 0.44
Lime1-202ENSMUST00000108804 Top2aQ01320 1528 aaKnown RBP17.73■□□□□ 0.43
Lime1-202ENSMUST00000108804 Pbrm1Q8BSQ9 1634 aaKnown RBP17.73■□□□□ 0.43
Lime1-202ENSMUST00000108804 Grin2aP35436 1464 aa17.72■□□□□ 0.43
Lime1-202ENSMUST00000108804 Setd1bQ8CFT2 1985 aa17.71■□□□□ 0.43
Lime1-202ENSMUST00000108804 Fgd6Q69ZL1 1399 aa17.7■□□□□ 0.42
Lime1-202ENSMUST00000108804 Magi3Q9EQJ9 1476 aa17.69■□□□□ 0.42
Lime1-202ENSMUST00000108804 PtprkP35822 1457 aa17.69■□□□□ 0.42
Lime1-202ENSMUST00000108804 AqrQ8CFQ3 1481 aaKnown RBP17.69■□□□□ 0.42
Lime1-202ENSMUST00000108804 Zcchc11B2RX14 1644 aaKnown RBP17.68■□□□□ 0.42
Lime1-202ENSMUST00000108804 Shroom4Q1W617 1475 aa17.66■□□□□ 0.42
Lime1-202ENSMUST00000108804 Zeb1Q64318 1117 aa17.63■□□□□ 0.41
Lime1-202ENSMUST00000108804 Pla2r1Q62028 1487 aa17.58■□□□□ 0.41
Lime1-202ENSMUST00000108804 Gm156Q58A37 223 aa17.58■□□□□ 0.4
Lime1-202ENSMUST00000108804 SynmQ70IV5 1561 aa17.57■□□□□ 0.4
Lime1-202ENSMUST00000108804 AknaQ80VW7 1404 aa17.56■□□□□ 0.4
Lime1-202ENSMUST00000108804 Adgrl3Q80TS3 1537 aa17.55■□□□□ 0.4
Lime1-202ENSMUST00000108804 Gapvd1Q6PAR5 1458 aa17.54■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms