RNA–Protein interactions for RNA: ENSMUST00000106118.9

Ebf3-202, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 3,736 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-202ENSMUST00000106118 Rrbp1Q99PL5 1605 aaKnown RBP16.04■□□□□ 0.16
Ebf3-202ENSMUST00000106118 Nop58Q6DFW4 536 aaKnown RBP16.03■□□□□ 0.16
Ebf3-202ENSMUST00000106118 Fkbp15Q6P9Q6 1216 aaKnown RBP16.03■□□□□ 0.16
Ebf3-202ENSMUST00000106118 Kiaa1551Q5DTW7 1521 aa16.03■□□□□ 0.16
Ebf3-202ENSMUST00000106118 Cabp1Q9JLK7 227 aa16.02■□□□□ 0.16
Ebf3-202ENSMUST00000106118 Arhgef12Q8R4H2 1543 aaKnown RBP16.01■□□□□ 0.15
Ebf3-202ENSMUST00000106118 Cdc42bpaQ3UU96 1719 aa16.01■□□□□ 0.15
Ebf3-202ENSMUST00000106118 Gm14025A2AP89 1413 aa16■□□□□ 0.15
Ebf3-202ENSMUST00000106118 Abcc5Q9R1X5 1436 aa16■□□□□ 0.15
Ebf3-202ENSMUST00000106118 Mapkbp1Q6NS57 1503 aa15.99■□□□□ 0.15
Ebf3-202ENSMUST00000106118 Ttbk1Q6PCN3 1308 aa15.98■□□□□ 0.15
Ebf3-202ENSMUST00000106118 Mlh3A0A1Y7VMP7 1443 aa15.98■□□□□ 0.15
Ebf3-202ENSMUST00000106118 Il16O54824 1322 aa15.98■□□□□ 0.15
Ebf3-202ENSMUST00000106118 1700123L14RikQ3V2K7 440 aa15.97■□□□□ 0.15
Ebf3-202ENSMUST00000106118 Adcy10Q8C0T9 1614 aa15.97■□□□□ 0.15
Ebf3-202ENSMUST00000106118 Caskin1Q6P9K8 1431 aa15.96■□□□□ 0.15
Ebf3-202ENSMUST00000106118 Fancd2Q80V62 1450 aa15.96■□□□□ 0.14
Ebf3-202ENSMUST00000106118 Arhgef40Q3UPH7 1517 aa15.95■□□□□ 0.14
Ebf3-202ENSMUST00000106118 Prex2Q3LAC4 1598 aa15.95■□□□□ 0.14
Ebf3-202ENSMUST00000106118 Mroh2aD3Z750 1679 aa15.94■□□□□ 0.14
Ebf3-202ENSMUST00000106118 DiexfQ8BTT6 772 aaKnown RBP15.94■□□□□ 0.14
Ebf3-202ENSMUST00000106118 Fhod3Q76LL6 1578 aa15.94■□□□□ 0.14
Ebf3-202ENSMUST00000106118 Mphosph9A6H5Y1 991 aa15.92■□□□□ 0.14
Ebf3-202ENSMUST00000106118 Hspa5P20029 655 aaKnown RBP15.92■□□□□ 0.14
Ebf3-202ENSMUST00000106118 Tdrd9Q14BI7 1383 aa15.9■□□□□ 0.14
Ebf3-202ENSMUST00000106118 Abcc1O35379 1528 aa15.9■□□□□ 0.14
Ebf3-202ENSMUST00000106118 Slc24a1Q91WD8 1130 aa15.89■□□□□ 0.13
Ebf3-202ENSMUST00000106118 Zcchc11B2RX14 1644 aaKnown RBP15.88■□□□□ 0.13
Ebf3-202ENSMUST00000106118 Dennd4bQ3U1Y4 1499 aa15.87■□□□□ 0.13
Ebf3-202ENSMUST00000106118 Kdm3bQ6ZPY7 1562 aa15.87■□□□□ 0.13
Ebf3-202ENSMUST00000106118 Kdm6bQ5NCY0 1641 aa15.86■□□□□ 0.13
Ebf3-202ENSMUST00000106118 Wdr7Q920I9 1489 aa15.85■□□□□ 0.13
Ebf3-202ENSMUST00000106118 Cul7Q8VE73 1689 aa15.84■□□□□ 0.13
Ebf3-202ENSMUST00000106118 Clstn2Q9ER65 966 aa15.82■□□□□ 0.12
Ebf3-202ENSMUST00000106118 Pkd2O35245 966 aa15.82■□□□□ 0.12
Ebf3-202ENSMUST00000106118 Arhgap5P97393 1501 aa15.82■□□□□ 0.12
Ebf3-202ENSMUST00000106118 Fam208aQ69ZR9 1610 aaKnown RBP15.81■□□□□ 0.12
Ebf3-202ENSMUST00000106118 Igf1rQ60751 1373 aa15.81■□□□□ 0.12
Ebf3-202ENSMUST00000106118 Pelp1Q9DBD5 1123 aaKnown RBP15.8■□□□□ 0.12
Ebf3-202ENSMUST00000106118 Kiaa1210E9Q0C6 1637 aa15.8■□□□□ 0.12
Ebf3-202ENSMUST00000106118 Camsap2Q8C1B1 1461 aa15.8■□□□□ 0.12
Ebf3-202ENSMUST00000106118 Gm13697A2AK42 830 aa15.79■□□□□ 0.12
Ebf3-202ENSMUST00000106118 Chd1P40201 1711 aa15.79■□□□□ 0.12
Ebf3-202ENSMUST00000106118 SphkapQ6NSW3 1687 aa15.78■□□□□ 0.12
Ebf3-202ENSMUST00000106118 Amer1Q7TS75 1132 aa15.78■□□□□ 0.12
Ebf3-202ENSMUST00000106118 Cfap74Q3UY96 1578 aa15.77■□□□□ 0.12
Ebf3-202ENSMUST00000106118 Adgrb2Q8CGM1 1561 aa15.77■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Setbp1Q9Z180 1582 aa15.77■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Zfp644E9QA22 1323 aa15.76■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Naip5Q9R016 1403 aa15.76■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Lamc1P02468 1607 aaKnown RBP15.76■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Rnf17Q99MV7 1640 aa15.76■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Myt1Q8CFC2 1127 aa15.76■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Nup155Q99P88 1391 aaKnown RBP15.76■□□□□ 0.11
Ebf3-202ENSMUST00000106118 NhsB1AV60 1647 aa15.76■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Fmn2Q9JL04 1578 aa15.75■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Anks4bQ8K3X6 423 aa15.75■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Atp10dQ8K2X1 1416 aa15.74■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Usp47Q8BY87 1376 aa15.74■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Rrp7aQ9D1C9 280 aaKnown RBP15.73■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Sart1Q9Z315 806 aaKnown RBP15.73■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Adgrl2Q8JZZ7 1487 aa15.73■□□□□ 0.11
Ebf3-202ENSMUST00000106118 AlkP97793 1621 aa15.73■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Map4P27546 1125 aaKnown RBP15.72■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Ythdc2B2RR83 1445 aaKnown RBP15.72■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Ifnlr1Q8CGK5 535 aa15.72■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Rprd2Q6NXI6 1469 aaKnown RBP15.72■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Pabpn1Q8CCS6 302 aaKnown RBP15.71■□□□□ 0.11
Ebf3-202ENSMUST00000106118 Pik3c2gO70167 1506 aa15.69■□□□□ 0.1
Ebf3-202ENSMUST00000106118 Prdm16A2A935 1275 aa15.69■□□□□ 0.1
Ebf3-202ENSMUST00000106118 Trak1Q6PD31 939 aa15.68■□□□□ 0.1
Ebf3-202ENSMUST00000106118 Mapk8ip2Q9ERE9 830 aa15.68■□□□□ 0.1
Ebf3-202ENSMUST00000106118 Neurl4Q5NCX5 1563 aa15.68■□□□□ 0.1
Ebf3-202ENSMUST00000106118 Gm32742A0A1B0GT42 1604 aa15.68■□□□□ 0.1
Ebf3-202ENSMUST00000106118 DroshaQ5HZJ0 1373 aaKnown RBP15.68■□□□□ 0.1
Ebf3-202ENSMUST00000106118 Ttll5Q8CHB8 1328 aa15.67■□□□□ 0.1
Ebf3-202ENSMUST00000106118 Abca8bQ8K440 1620 aa15.67■□□□□ 0.1
Ebf3-202ENSMUST00000106118 Mast1Q9R1L5 1570 aa15.67■□□□□ 0.1
Ebf3-202ENSMUST00000106118 Hdac5Q9Z2V6 1113 aa15.67■□□□□ 0.1
Ebf3-202ENSMUST00000106118 Trappc8E9PWG2 1437 aa15.66■□□□□ 0.1
Ebf3-202ENSMUST00000106118 Kif21bQ9QXL1 1668 aa15.66■□□□□ 0.1
Ebf3-202ENSMUST00000106118 Pdcd11Q6NS46 1862 aaKnown RBP15.65■□□□□ 0.1
Ebf3-202ENSMUST00000106118 Gapvd1Q6PAR5 1458 aa15.65■□□□□ 0.1
Ebf3-202ENSMUST00000106118 Hecw1Q8K4P8 1604 aa15.65■□□□□ 0.1
Ebf3-202ENSMUST00000106118 Lrrc9Q8CDN9 1456 aa15.64■□□□□ 0.09
Ebf3-202ENSMUST00000106118 Trpm2Q91YD4 1506 aa15.63■□□□□ 0.09
Ebf3-202ENSMUST00000106118 Abcc3B2RX12 1523 aa15.61■□□□□ 0.09
Ebf3-202ENSMUST00000106118 Zbtb7cQ8VCZ7 619 aa15.61■□□□□ 0.09
Ebf3-202ENSMUST00000106118 AI481877A2ALV5 1481 aa15.6■□□□□ 0.09
Ebf3-202ENSMUST00000106118 Spag9Q58A65 1321 aaKnown RBP15.6■□□□□ 0.09
Ebf3-202ENSMUST00000106118 Rgl3Q3UYI5 709 aa15.6■□□□□ 0.09
Ebf3-202ENSMUST00000106118 Dhx9O70133 1380 aaKnown RBP15.6■□□□□ 0.09
Ebf3-202ENSMUST00000106118 Ssh2Q5SW75 1423 aa15.59■□□□□ 0.09
Ebf3-202ENSMUST00000106118 Arid3cA6PWV5 409 aa15.58■□□□□ 0.09
Ebf3-202ENSMUST00000106118 Hnrnpul2Q00PI9 745 aaKnown RBP15.58■□□□□ 0.08
Ebf3-202ENSMUST00000106118 Lemd3Q9WU40 921 aa15.58■□□□□ 0.08
Ebf3-202ENSMUST00000106118 Stra8P70278 393 aa15.57■□□□□ 0.08
Ebf3-202ENSMUST00000106118 PtprtQ99M80 1454 aa15.57■□□□□ 0.08
Ebf3-202ENSMUST00000106118 Supt6hQ62383 1726 aaKnown RBP15.56■□□□□ 0.08
Ebf3-202ENSMUST00000106118 PtprgQ05909 1442 aa15.56■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 51.3 ms