RNA–Protein interactions for RNA: ENSMUST00000100497.10

Actb-201, Transcript of Actin, cytoplasmic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Actb, Length 1,920 nt, Biotype protein coding, Subcellular localisation Axon, Cell leading edge, Cytoplasm, Cytosol, Dendrite, Endoplasmic reticulum, Exosome, Growth cone, Lamellipodium, Perinuclear, Ribosome, Somatodendritic compartment .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Actb-201ENSMUST00000100497 Mapkbp1Q6NS57 1503 aa17.57■□□□□ 0.4
Actb-201ENSMUST00000100497 Neo1P97798 1493 aa17.54■□□□□ 0.4
Actb-201ENSMUST00000100497 Adcy10Q8C0T9 1614 aa17.54■□□□□ 0.4
Actb-201ENSMUST00000100497 Chd1P40201 1711 aa17.54■□□□□ 0.4
Actb-201ENSMUST00000100497 Mlh3A0A1Y7VMP7 1443 aa17.54■□□□□ 0.4
Actb-201ENSMUST00000100497 Abcc5Q9R1X5 1436 aa17.54■□□□□ 0.4
Actb-201ENSMUST00000100497 Mtus2Q3UHD3 1353 aa17.53■□□□□ 0.4
Actb-201ENSMUST00000100497 Caskin1Q6P9K8 1431 aa17.53■□□□□ 0.4
Actb-201ENSMUST00000100497 Setbp1Q9Z180 1582 aa17.53■□□□□ 0.4
Actb-201ENSMUST00000100497 Zcchc11B2RX14 1644 aaKnown RBP17.52■□□□□ 0.4
Actb-201ENSMUST00000100497 Lamc1P02468 1607 aaKnown RBP17.52■□□□□ 0.4
Actb-201ENSMUST00000100497 Dennd4bQ3U1Y4 1499 aa17.51■□□□□ 0.39
Actb-201ENSMUST00000100497 Col17a1Q07563 1470 aa17.5■□□□□ 0.39
Actb-201ENSMUST00000100497 Ube2uB1AUC4 352 aa17.5■□□□□ 0.39
Actb-201ENSMUST00000100497 Gm14025A2AP89 1413 aa17.49■□□□□ 0.39
Actb-201ENSMUST00000100497 Gapvd1Q6PAR5 1458 aa17.48■□□□□ 0.39
Actb-201ENSMUST00000100497 Nop58Q6DFW4 536 aaKnown RBP17.48■□□□□ 0.39
Actb-201ENSMUST00000100497 Mroh2aD3Z750 1679 aa17.47■□□□□ 0.39
Actb-201ENSMUST00000100497 Kdm3bQ6ZPY7 1562 aa17.47■□□□□ 0.39
Actb-201ENSMUST00000100497 Arhgef40Q3UPH7 1517 aa17.47■□□□□ 0.39
Actb-201ENSMUST00000100497 Arhgef12Q8R4H2 1543 aaKnown RBP17.47■□□□□ 0.39
Actb-201ENSMUST00000100497 Gm13697A2AK42 830 aa17.47■□□□□ 0.39
Actb-201ENSMUST00000100497 Kif21bQ9QXL1 1668 aa17.46■□□□□ 0.39
Actb-201ENSMUST00000100497 Chic2Q9D9G3 165 aa17.46■□□□□ 0.39
Actb-201ENSMUST00000100497 Jph4Q80WT0 628 aa17.45■□□□□ 0.38
Actb-201ENSMUST00000100497 Cep170Q6A065 1588 aa17.45■□□□□ 0.38
Actb-201ENSMUST00000100497 Wdr7Q920I9 1489 aa17.44■□□□□ 0.38
Actb-201ENSMUST00000100497 Kiaa1210E9Q0C6 1637 aa17.44■□□□□ 0.38
Actb-201ENSMUST00000100497 Fancd2Q80V62 1450 aa17.43■□□□□ 0.38
Actb-201ENSMUST00000100497 Cabp1Q9JLK7 227 aa17.43■□□□□ 0.38
Actb-201ENSMUST00000100497 Mphosph9A6H5Y1 991 aa17.43■□□□□ 0.38
Actb-201ENSMUST00000100497 Naip5Q9R016 1403 aa17.42■□□□□ 0.38
Actb-201ENSMUST00000100497 Dnajc5P60904 198 aa17.42■□□□□ 0.38
Actb-201ENSMUST00000100497 Prex2Q3LAC4 1598 aa17.42■□□□□ 0.38
Actb-201ENSMUST00000100497 Neurod1Q60867 357 aa17.41■□□□□ 0.38
Actb-201ENSMUST00000100497 Ythdc2B2RR83 1445 aaKnown RBP17.41■□□□□ 0.38
Actb-201ENSMUST00000100497 Kdm6bQ5NCY0 1641 aa17.41■□□□□ 0.38
Actb-201ENSMUST00000100497 Hspa5P20029 655 aaKnown RBP17.41■□□□□ 0.38
Actb-201ENSMUST00000100497 Anks4bQ8K3X6 423 aa17.4■□□□□ 0.38
Actb-201ENSMUST00000100497 Fam208aQ69ZR9 1610 aaKnown RBP17.39■□□□□ 0.38
Actb-201ENSMUST00000100497 DroshaQ5HZJ0 1373 aaKnown RBP17.39■□□□□ 0.37
Actb-201ENSMUST00000100497 SphkapQ6NSW3 1687 aa17.38■□□□□ 0.37
Actb-201ENSMUST00000100497 Neurl4Q5NCX5 1563 aa17.37■□□□□ 0.37
Actb-201ENSMUST00000100497 Rnf17Q99MV7 1640 aa17.37■□□□□ 0.37
Actb-201ENSMUST00000100497 Fmn2Q9JL04 1578 aa17.36■□□□□ 0.37
Actb-201ENSMUST00000100497 Adgrl3Q80TS3 1537 aa17.36■□□□□ 0.37
Actb-201ENSMUST00000100497 Rprd2Q6NXI6 1469 aaKnown RBP17.36■□□□□ 0.37
Actb-201ENSMUST00000100497 PtprtQ99M80 1454 aa17.34■□□□□ 0.37
Actb-201ENSMUST00000100497 Cfap74Q3UY96 1578 aa17.34■□□□□ 0.37
Actb-201ENSMUST00000100497 Pdcd11Q6NS46 1862 aaKnown RBP17.33■□□□□ 0.36
Actb-201ENSMUST00000100497 Adgrl2Q8JZZ7 1487 aa17.33■□□□□ 0.36
Actb-201ENSMUST00000100497 Pik3c2gO70167 1506 aa17.33■□□□□ 0.36
Actb-201ENSMUST00000100497 Pprc1Q6NZN1 1644 aa17.33■□□□□ 0.36
Actb-201ENSMUST00000100497 AlkP97793 1621 aa17.32■□□□□ 0.36
Actb-201ENSMUST00000100497 Stra8P70278 393 aa17.31■□□□□ 0.36
Actb-201ENSMUST00000100497 Mast1Q9R1L5 1570 aa17.31■□□□□ 0.36
Actb-201ENSMUST00000100497 Gm156Q58A37 223 aa17.3■□□□□ 0.36
Actb-201ENSMUST00000100497 Hecw1Q8K4P8 1604 aa17.3■□□□□ 0.36
Actb-201ENSMUST00000100497 AI481877A2ALV5 1481 aa17.29■□□□□ 0.36
Actb-201ENSMUST00000100497 Trpm2Q91YD4 1506 aa17.28■□□□□ 0.36
Actb-201ENSMUST00000100497 Pkd2O35245 966 aa17.28■□□□□ 0.36
Actb-201ENSMUST00000100497 Clstn2Q9ER65 966 aa17.28■□□□□ 0.36
Actb-201ENSMUST00000100497 NhsB1AV60 1647 aa17.28■□□□□ 0.36
Actb-201ENSMUST00000100497 Tdrd9Q14BI7 1383 aa17.28■□□□□ 0.36
Actb-201ENSMUST00000100497 Adgrb2Q8CGM1 1561 aa17.28■□□□□ 0.36
Actb-201ENSMUST00000100497 Usp47Q8BY87 1376 aa17.26■□□□□ 0.35
Actb-201ENSMUST00000100497 Igf1rQ60751 1373 aa17.25■□□□□ 0.35
Actb-201ENSMUST00000100497 Arhgap5P97393 1501 aa17.24■□□□□ 0.35
Actb-201ENSMUST00000100497 Gm32742A0A1B0GT42 1604 aa17.24■□□□□ 0.35
Actb-201ENSMUST00000100497 Fkbp15Q6P9Q6 1216 aaKnown RBP17.21■□□□□ 0.35
Actb-201ENSMUST00000100497 Hdac5Q9Z2V6 1113 aa17.21■□□□□ 0.35
Actb-201ENSMUST00000100497 Nup155Q99P88 1391 aaKnown RBP17.2■□□□□ 0.34
Actb-201ENSMUST00000100497 Abca8bQ8K440 1620 aa17.2■□□□□ 0.34
Actb-201ENSMUST00000100497 Lrrc9Q8CDN9 1456 aa17.19■□□□□ 0.34
Actb-201ENSMUST00000100497 Ppargc1bQ8VHJ7 1014 aa17.17■□□□□ 0.34
Actb-201ENSMUST00000100497 Supt6hQ62383 1726 aaKnown RBP17.17■□□□□ 0.34
Actb-201ENSMUST00000100497 Zfp644E9QA22 1323 aa17.15■□□□□ 0.34
Actb-201ENSMUST00000100497 Ak9G3UYQ4 1894 aa17.15■□□□□ 0.34
Actb-201ENSMUST00000100497 Abcc3B2RX12 1523 aa17.15■□□□□ 0.34
Actb-201ENSMUST00000100497 Prdm16A2A935 1275 aa17.14■□□□□ 0.33
Actb-201ENSMUST00000100497 Cwc22Q8C5N3 908 aaKnown RBP17.13■□□□□ 0.33
Actb-201ENSMUST00000100497 Tnnt3Q9QZ47 272 aa17.13■□□□□ 0.33
Actb-201ENSMUST00000100497 PtprgQ05909 1442 aa17.13■□□□□ 0.33
Actb-201ENSMUST00000100497 Ttll5Q8CHB8 1328 aa17.11■□□□□ 0.33
Actb-201ENSMUST00000100497 Map4P27546 1125 aaKnown RBP17.11■□□□□ 0.33
Actb-201ENSMUST00000100497 Ttbk1Q6PCN3 1308 aa17.11■□□□□ 0.33
Actb-201ENSMUST00000100497 Rock1P70335 1354 aa17.1■□□□□ 0.33
Actb-201ENSMUST00000100497 Ncoa1P70365 1447 aa17.1■□□□□ 0.33
Actb-201ENSMUST00000100497 Mbd5B1AYB6 1498 aa17.1■□□□□ 0.33
Actb-201ENSMUST00000100497 Atp10dQ8K2X1 1416 aa17.1■□□□□ 0.33
Actb-201ENSMUST00000100497 Smg6P61406 1418 aaKnown RBP17.07■□□□□ 0.32
Actb-201ENSMUST00000100497 Kif14L0N7N1 1674 aaKnown RBP17.07■□□□□ 0.32
Actb-201ENSMUST00000100497 Trak1Q6PD31 939 aa17.07■□□□□ 0.32
Actb-201ENSMUST00000100497 Ifnlr1Q8CGK5 535 aa17.07■□□□□ 0.32
Actb-201ENSMUST00000100497 Ppip5k1A2ARP1 1436 aa17.06■□□□□ 0.32
Actb-201ENSMUST00000100497 Ssh2Q5SW75 1423 aa17.06■□□□□ 0.32
Actb-201ENSMUST00000100497 Cpsf1Q9EPU4 1441 aaKnown RBP17.06■□□□□ 0.32
Actb-201ENSMUST00000100497 Sart1Q9Z315 806 aaKnown RBP17.06■□□□□ 0.32
Actb-201ENSMUST00000100497 Cdc42bpbQ7TT50 1713 aa17.05■□□□□ 0.32
Actb-201ENSMUST00000100497 Znf608Q56A10 1511 aa17.04■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 80.6 ms