RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Calcoco2A2A6M5 331 aa19.15■□□□□ 0.66
Chd3-201ENSMUST00000092971 Podxl2Q8CAE9 603 aa19.15■□□□□ 0.66
Chd3-201ENSMUST00000092971 Arid4aF8VPQ2 1261 aaKnown RBP19.15■□□□□ 0.66
Chd3-201ENSMUST00000092971 GorabQ8BRM2 368 aa19.14■□□□□ 0.66
Chd3-201ENSMUST00000092971 Samd1D3YXK1 519 aa19.14■□□□□ 0.65
Chd3-201ENSMUST00000092971 Speer4f1Q9D5Q6 258 aa19.14■□□□□ 0.65
Chd3-201ENSMUST00000092971 Chmp4bQ9D8B3 224 aaKnown RBP19.14■□□□□ 0.65
Chd3-201ENSMUST00000092971 Chmp5Q9D7S9 219 aa19.14■□□□□ 0.65
Chd3-201ENSMUST00000092971 Mfap1aC0HKD8 439 aaKnown RBP19.13■□□□□ 0.65
Chd3-201ENSMUST00000092971 Mfap1bC0HKD9 439 aaKnown RBP19.13■□□□□ 0.65
Chd3-201ENSMUST00000092971 Gm973E9Q295 1059 aa19.13■□□□□ 0.65
Chd3-201ENSMUST00000092971 Noc3lQ8VI84 807 aaKnown RBP19.12■□□□□ 0.65
Chd3-201ENSMUST00000092971 BccipQ9CWI3 316 aa19.12■□□□□ 0.65
Chd3-201ENSMUST00000092971 Dnai1Q8C0M8 701 aa19.11■□□□□ 0.65
Chd3-201ENSMUST00000092971 Ggt6Q6PDE7 497 aa19.1■□□□□ 0.65
Chd3-201ENSMUST00000092971 Stk26Q99JT2 416 aa19.1■□□□□ 0.65
Chd3-201ENSMUST00000092971 SlkO54988 1233 aa19.09■□□□□ 0.65
Chd3-201ENSMUST00000092971 Rtf1A2AQ19 715 aaKnown RBP19.08■□□□□ 0.65
Chd3-201ENSMUST00000092971 Cwc22Q8C5N3 908 aaKnown RBP19.07■□□□□ 0.64
Chd3-201ENSMUST00000092971 MecomP14404 1042 aa19.07■□□□□ 0.64
Chd3-201ENSMUST00000092971 IbspQ61711 324 aa19.05■□□□□ 0.64
Chd3-201ENSMUST00000092971 Slc4a1apE9PX68 744 aa19.05■□□□□ 0.64
Chd3-201ENSMUST00000092971 Pibf1E9Q6K3 756 aa19.05■□□□□ 0.64
Chd3-201ENSMUST00000092971 Ncbp3Q8BZR9 615 aaKnown RBP19.04■□□□□ 0.64
Chd3-201ENSMUST00000092971 Hspa5P20029 655 aaKnown RBP19.04■□□□□ 0.64
Chd3-201ENSMUST00000092971 HnrnpuQ8VEK3 800 aaKnown RBP19.03■□□□□ 0.64
Chd3-201ENSMUST00000092971 SetQ9EQU5 289 aaKnown RBP19.03■□□□□ 0.64
Chd3-201ENSMUST00000092971 Brpf1B2RRD7 1212 aa19.02■□□□□ 0.63
Chd3-201ENSMUST00000092971 Sox12Q04890 314 aa19.02■□□□□ 0.63
Chd3-201ENSMUST00000092971 Tcerg1Q8CGF7 1100 aaKnown RBP19.01■□□□□ 0.63
Chd3-201ENSMUST00000092971 Birc3O08863 600 aa19.01■□□□□ 0.63
Chd3-201ENSMUST00000092971 Q3TQI7 289 aaKnown RBP19■□□□□ 0.63
Chd3-201ENSMUST00000092971 Tpm3-rs7D3Z2H9 248 aa18.99■□□□□ 0.63
Chd3-201ENSMUST00000092971 Nol10Q5RJG1 687 aaKnown RBP18.99■□□□□ 0.63
Chd3-201ENSMUST00000092971 Sin3aQ60520 1274 aaKnown RBP18.99■□□□□ 0.63
Chd3-201ENSMUST00000092971 ChgaP26339 463 aaKnown RBP18.99■□□□□ 0.63
Chd3-201ENSMUST00000092971 Tomm22Q9CPQ3 142 aa18.99■□□□□ 0.63
Chd3-201ENSMUST00000092971 U2af1Q9D883 239 aaKnown RBP18.98■□□□□ 0.63
Chd3-201ENSMUST00000092971 Sart3Q9JLI8 962 aaKnown RBP18.98■□□□□ 0.63
Chd3-201ENSMUST00000092971 Vps53Q8CCB4 832 aa18.98■□□□□ 0.63
Chd3-201ENSMUST00000092971 EspnQ9ET47 871 aa18.97■□□□□ 0.63
Chd3-201ENSMUST00000092971 Exoc6Q8R313 802 aa18.97■□□□□ 0.63
Chd3-201ENSMUST00000092971 Chmp3Q9CQ10 224 aa18.97■□□□□ 0.63
Chd3-201ENSMUST00000092971 RdxP26043 583 aaKnown RBP18.96■□□□□ 0.63
Chd3-201ENSMUST00000092971 Trim30aP15533 496 aa18.95■□□□□ 0.62
Chd3-201ENSMUST00000092971 Ftsj3Q9DBE9 838 aaKnown RBP18.94■□□□□ 0.62
Chd3-201ENSMUST00000092971 Rundc1Q0VDN7 615 aa18.93■□□□□ 0.62
Chd3-201ENSMUST00000092971 Cald1E9QA15 768 aaKnown RBP18.93■□□□□ 0.62
Chd3-201ENSMUST00000092971 Rrp12Q6P5B0 1295 aaKnown RBP18.93■□□□□ 0.62
Chd3-201ENSMUST00000092971 Fam193aQ8CGI1 1231 aaKnown RBP18.92■□□□□ 0.62
Chd3-201ENSMUST00000092971 Mtus2Q3UHD3 1353 aa18.92■□□□□ 0.62
Chd3-201ENSMUST00000092971 Ipo8Q7TMY7 1010 aa18.92■□□□□ 0.62
Chd3-201ENSMUST00000092971 Drc7Q6V3W6 876 aa18.91■□□□□ 0.62
Chd3-201ENSMUST00000092971 Eif4g2Q62448 906 aaKnown RBP18.91■□□□□ 0.62
Chd3-201ENSMUST00000092971 Ipo9Q91YE6 1041 aa18.9■□□□□ 0.62
Chd3-201ENSMUST00000092971 Abcc8B2RUS7 1588 aa18.9■□□□□ 0.62
Chd3-201ENSMUST00000092971 CrbnQ8C7D2 445 aa18.9■□□□□ 0.62
Chd3-201ENSMUST00000092971 Mbd3Q9Z2D8 285 aaKnown RBP18.9■□□□□ 0.62
Chd3-201ENSMUST00000092971 Ifit1bl1D3Z6F0 470 aa18.89■□□□□ 0.61
Chd3-201ENSMUST00000092971 Tpm3P21107 285 aaKnown RBP18.88■□□□□ 0.61
Chd3-201ENSMUST00000092971 R3hcc1Q8BSI6 488 aa18.88■□□□□ 0.61
Chd3-201ENSMUST00000092971 Ccer1Q9CQL2 403 aa18.88■□□□□ 0.61
Chd3-201ENSMUST00000092971 Dcaf11Q91VU6 549 aa18.86■□□□□ 0.61
Chd3-201ENSMUST00000092971 PtmsQ9D0J8 101 aaKnown RBP18.86■□□□□ 0.61
Chd3-201ENSMUST00000092971 Ccdc146E9Q9F7 977 aa18.85■□□□□ 0.61
Chd3-201ENSMUST00000092971 Tpd52l1O54818 204 aa18.84■□□□□ 0.61
Chd3-201ENSMUST00000092971 Wdr78E9PYY5 807 aa18.84■□□□□ 0.61
Chd3-201ENSMUST00000092971 Golga2Q921M4 999 aa18.83■□□□□ 0.61
Chd3-201ENSMUST00000092971 Becn1O88597 448 aa18.83■□□□□ 0.6
Chd3-201ENSMUST00000092971 Dnai2A2AC93 623 aa18.82■□□□□ 0.6
Chd3-201ENSMUST00000092971 Ksr2Q3UVC0 959 aa18.82■□□□□ 0.6
Chd3-201ENSMUST00000092971 Ipo4Q8VI75 1082 aa18.81■□□□□ 0.6
Chd3-201ENSMUST00000092971 Fnbp4Q6ZQ03 1031 aa18.81■□□□□ 0.6
Chd3-201ENSMUST00000092971 Polr3gQ6NXY9 223 aa18.8■□□□□ 0.6
Chd3-201ENSMUST00000092971 Slc4a10Q5DTL9 1118 aa18.8■□□□□ 0.6
Chd3-201ENSMUST00000092971 Gtf2e1Q9D0D5 440 aa18.8■□□□□ 0.6
Chd3-201ENSMUST00000092971 Rb1cc1Q9ESK9 1588 aa18.8■□□□□ 0.6
Chd3-201ENSMUST00000092971 Eea1Q8BL66 1411 aa18.79■□□□□ 0.6
Chd3-201ENSMUST00000092971 A0A0U1RNP2 1173 aa18.79■□□□□ 0.6
Chd3-201ENSMUST00000092971 Zfp777B9EKF4 885 aa18.79■□□□□ 0.6
Chd3-201ENSMUST00000092971 Ppp1r18Q8BQ30 594 aa18.78■□□□□ 0.6
Chd3-201ENSMUST00000092971 Chmp4cQ9D7F7 232 aa18.78■□□□□ 0.6
Chd3-201ENSMUST00000092971 Sf3a1Q8K4Z5 791 aaKnown RBP18.78■□□□□ 0.6
Chd3-201ENSMUST00000092971 Ppm1fQ8CGA0 452 aa18.78■□□□□ 0.6
Chd3-201ENSMUST00000092971 VgfQ0VGU4 617 aa18.77■□□□□ 0.6
Chd3-201ENSMUST00000092971 Fhad1A6PWD2 1420 aa18.77■□□□□ 0.6
Chd3-201ENSMUST00000092971 Kri1Q8VDQ9 704 aaKnown RBP18.77■□□□□ 0.59
Chd3-201ENSMUST00000092971 Map4P27546 1125 aaKnown RBP18.76■□□□□ 0.59
Chd3-201ENSMUST00000092971 Tmf1B9EKI3 1091 aa18.76■□□□□ 0.59
Chd3-201ENSMUST00000092971 Zscan21Q07231 555 aa18.76■□□□□ 0.59
Chd3-201ENSMUST00000092971 Pkd2O35245 966 aa18.75■□□□□ 0.59
Chd3-201ENSMUST00000092971 Cc2d1aQ8K1A6 943 aa18.75■□□□□ 0.59
Chd3-201ENSMUST00000092971 Kif15Q6P9L6 1387 aa18.75■□□□□ 0.59
Chd3-201ENSMUST00000092971 Arid3cA6PWV5 409 aa18.74■□□□□ 0.59
Chd3-201ENSMUST00000092971 Fbxo2Q80UW2 297 aa18.74■□□□□ 0.59
Chd3-201ENSMUST00000092971 Hdgfl1Q2VPR5 283 aa18.74■□□□□ 0.59
Chd3-201ENSMUST00000092971 Krt82Q99M74 516 aa18.74■□□□□ 0.59
Chd3-201ENSMUST00000092971 Znf704Q9ERQ3 566 aa18.74■□□□□ 0.59
Chd3-201ENSMUST00000092971 Nolc1E9Q5C9 702 aaKnown RBP18.73■□□□□ 0.59
Chd3-201ENSMUST00000092971 Gtf3c3Q3TMP1 882 aa18.73■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms