RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Cul7Q8VE73 1689 aa18.21■□□□□ 0.51
Lig3-202ENSMUST00000080461 Abcc5Q9R1X5 1436 aa18.2■□□□□ 0.5
Lig3-202ENSMUST00000080461 Kdm6bQ5NCY0 1641 aa18.2■□□□□ 0.5
Lig3-202ENSMUST00000080461 Fam208aQ69ZR9 1610 aaKnown RBP18.2■□□□□ 0.5
Lig3-202ENSMUST00000080461 Fkbp15Q6P9Q6 1216 aaKnown RBP18.19■□□□□ 0.5
Lig3-202ENSMUST00000080461 Kiaa1210E9Q0C6 1637 aa18.19■□□□□ 0.5
Lig3-202ENSMUST00000080461 Mlh3A0A1Y7VMP7 1443 aa18.19■□□□□ 0.5
Lig3-202ENSMUST00000080461 NhsB1AV60 1647 aa18.18■□□□□ 0.5
Lig3-202ENSMUST00000080461 Rfx7F8VPJ6 1459 aa18.18■□□□□ 0.5
Lig3-202ENSMUST00000080461 Ccer2J3QPU5 274 aa18.18■□□□□ 0.5
Lig3-202ENSMUST00000080461 Plekhh2Q8C115 1491 aa18.17■□□□□ 0.5
Lig3-202ENSMUST00000080461 Dennd4bQ3U1Y4 1499 aa18.16■□□□□ 0.5
Lig3-202ENSMUST00000080461 Caskin1Q6P9K8 1431 aa18.16■□□□□ 0.5
Lig3-202ENSMUST00000080461 Wdr7Q920I9 1489 aa18.15■□□□□ 0.5
Lig3-202ENSMUST00000080461 Chic2Q9D9G3 165 aa18.14■□□□□ 0.5
Lig3-202ENSMUST00000080461 Ythdc2B2RR83 1445 aaKnown RBP18.12■□□□□ 0.49
Lig3-202ENSMUST00000080461 Cdk11bP24788 784 aaKnown RBP18.12■□□□□ 0.49
Lig3-202ENSMUST00000080461 Il16O54824 1322 aa18.11■□□□□ 0.49
Lig3-202ENSMUST00000080461 Fhod3Q76LL6 1578 aa18.11■□□□□ 0.49
Lig3-202ENSMUST00000080461 Cabp1Q9JLK7 227 aa18.11■□□□□ 0.49
Lig3-202ENSMUST00000080461 Mtus2Q3UHD3 1353 aa18.11■□□□□ 0.49
Lig3-202ENSMUST00000080461 Ankrd36D3Z4K0 1415 aa18.1■□□□□ 0.49
Lig3-202ENSMUST00000080461 Rnf17Q99MV7 1640 aa18.09■□□□□ 0.49
Lig3-202ENSMUST00000080461 Igf1rQ60751 1373 aa18.09■□□□□ 0.49
Lig3-202ENSMUST00000080461 Pabpn1Q8CCS6 302 aaKnown RBP18.08■□□□□ 0.49
Lig3-202ENSMUST00000080461 Kdm3bQ6ZPY7 1562 aa18.08■□□□□ 0.48
Lig3-202ENSMUST00000080461 Gapvd1Q6PAR5 1458 aa18.07■□□□□ 0.48
Lig3-202ENSMUST00000080461 Tdrd9Q14BI7 1383 aa18.07■□□□□ 0.48
Lig3-202ENSMUST00000080461 SphkapQ6NSW3 1687 aa18.07■□□□□ 0.48
Lig3-202ENSMUST00000080461 Abca8bQ8K440 1620 aa18.07■□□□□ 0.48
Lig3-202ENSMUST00000080461 Ube2uB1AUC4 352 aa18.07■□□□□ 0.48
Lig3-202ENSMUST00000080461 Pelp1Q9DBD5 1123 aaKnown RBP18.06■□□□□ 0.48
Lig3-202ENSMUST00000080461 PtprtQ99M80 1454 aa18.06■□□□□ 0.48
Lig3-202ENSMUST00000080461 Atp10dQ8K2X1 1416 aa18.03■□□□□ 0.48
Lig3-202ENSMUST00000080461 Pdcd11Q6NS46 1862 aaKnown RBP18.03■□□□□ 0.48
Lig3-202ENSMUST00000080461 NclP09405 707 aaKnown RBP18.02■□□□□ 0.48
Lig3-202ENSMUST00000080461 Gm32742A0A1B0GT42 1604 aa18.02■□□□□ 0.48
Lig3-202ENSMUST00000080461 Arhgap5P97393 1501 aa18.01■□□□□ 0.47
Lig3-202ENSMUST00000080461 Adgrb2Q8CGM1 1561 aa18■□□□□ 0.47
Lig3-202ENSMUST00000080461 AI481877A2ALV5 1481 aa17.99■□□□□ 0.47
Lig3-202ENSMUST00000080461 Cfap74Q3UY96 1578 aa17.99■□□□□ 0.47
Lig3-202ENSMUST00000080461 Cep170Q6A065 1588 aa17.99■□□□□ 0.47
Lig3-202ENSMUST00000080461 Lrrc9Q8CDN9 1456 aa17.97■□□□□ 0.47
Lig3-202ENSMUST00000080461 Znf608Q56A10 1511 aa17.97■□□□□ 0.47
Lig3-202ENSMUST00000080461 Setbp1Q9Z180 1582 aa17.96■□□□□ 0.47
Lig3-202ENSMUST00000080461 Fmn2Q9JL04 1578 aa17.96■□□□□ 0.47
Lig3-202ENSMUST00000080461 Abcc3B2RX12 1523 aa17.94■□□□□ 0.46
Lig3-202ENSMUST00000080461 AlkP97793 1621 aa17.94■□□□□ 0.46
Lig3-202ENSMUST00000080461 Neurl4Q5NCX5 1563 aa17.93■□□□□ 0.46
Lig3-202ENSMUST00000080461 Mast1Q9R1L5 1570 aa17.93■□□□□ 0.46
Lig3-202ENSMUST00000080461 Trappc8E9PWG2 1437 aa17.93■□□□□ 0.46
Lig3-202ENSMUST00000080461 Hspa5P20029 655 aaKnown RBP17.93■□□□□ 0.46
Lig3-202ENSMUST00000080461 Mphosph9A6H5Y1 991 aa17.92■□□□□ 0.46
Lig3-202ENSMUST00000080461 Lamc1P02468 1607 aaKnown RBP17.92■□□□□ 0.46
Lig3-202ENSMUST00000080461 ClspnQ80YR7 1315 aa17.92■□□□□ 0.46
Lig3-202ENSMUST00000080461 Adgrl2Q8JZZ7 1487 aa17.91■□□□□ 0.46
Lig3-202ENSMUST00000080461 Hecw1Q8K4P8 1604 aa17.91■□□□□ 0.46
Lig3-202ENSMUST00000080461 Mapk8ip2Q9ERE9 830 aa17.9■□□□□ 0.46
Lig3-202ENSMUST00000080461 Zfp644E9QA22 1323 aa17.89■□□□□ 0.46
Lig3-202ENSMUST00000080461 Kif21bQ9QXL1 1668 aa17.88■□□□□ 0.45
Lig3-202ENSMUST00000080461 Trpm2Q91YD4 1506 aa17.87■□□□□ 0.45
Lig3-202ENSMUST00000080461 Zfyve16Q80U44 1528 aa17.86■□□□□ 0.45
Lig3-202ENSMUST00000080461 Ifnlr1Q8CGK5 535 aa17.86■□□□□ 0.45
Lig3-202ENSMUST00000080461 Kidins220E9Q9B7 1793 aa17.85■□□□□ 0.45
Lig3-202ENSMUST00000080461 Neurod1Q60867 357 aa17.85■□□□□ 0.45
Lig3-202ENSMUST00000080461 Sart1Q9Z315 806 aaKnown RBP17.85■□□□□ 0.45
Lig3-202ENSMUST00000080461 Cdc42bpbQ7TT50 1713 aa17.85■□□□□ 0.45
Lig3-202ENSMUST00000080461 Gm156Q58A37 223 aa17.84■□□□□ 0.45
Lig3-202ENSMUST00000080461 Abca9Q8K449 1623 aa17.81■□□□□ 0.44
Lig3-202ENSMUST00000080461 Supt6hQ62383 1726 aaKnown RBP17.79■□□□□ 0.44
Lig3-202ENSMUST00000080461 Pprc1Q6NZN1 1644 aa17.79■□□□□ 0.44
Lig3-202ENSMUST00000080461 Arid3cA6PWV5 409 aa17.78■□□□□ 0.44
Lig3-202ENSMUST00000080461 Ssh2Q5SW75 1423 aa17.78■□□□□ 0.44
Lig3-202ENSMUST00000080461 Nup155Q99P88 1391 aaKnown RBP17.78■□□□□ 0.44
Lig3-202ENSMUST00000080461 Prdm16A2A935 1275 aa17.78■□□□□ 0.44
Lig3-202ENSMUST00000080461 Rrp7aQ9D1C9 280 aaKnown RBP17.78■□□□□ 0.44
Lig3-202ENSMUST00000080461 Naip5Q9R016 1403 aa17.77■□□□□ 0.44
Lig3-202ENSMUST00000080461 Adgrl3Q80TS3 1537 aa17.77■□□□□ 0.44
Lig3-202ENSMUST00000080461 Pkd2O35245 966 aa17.77■□□□□ 0.44
Lig3-202ENSMUST00000080461 Ttll5Q8CHB8 1328 aa17.77■□□□□ 0.43
Lig3-202ENSMUST00000080461 Ak9G3UYQ4 1894 aa17.77■□□□□ 0.43
Lig3-202ENSMUST00000080461 Rprd2Q6NXI6 1469 aaKnown RBP17.76■□□□□ 0.43
Lig3-202ENSMUST00000080461 Camsap2Q8C1B1 1461 aa17.75■□□□□ 0.43
Lig3-202ENSMUST00000080461 Pik3c2gO70167 1506 aa17.73■□□□□ 0.43
Lig3-202ENSMUST00000080461 Map4P27546 1125 aaKnown RBP17.71■□□□□ 0.43
Lig3-202ENSMUST00000080461 Clstn2Q9ER65 966 aa17.71■□□□□ 0.43
Lig3-202ENSMUST00000080461 Abca17E9PX95 1733 aa17.7■□□□□ 0.42
Lig3-202ENSMUST00000080461 Usp47Q8BY87 1376 aa17.7■□□□□ 0.42
Lig3-202ENSMUST00000080461 Zbtb7cQ8VCZ7 619 aa17.7■□□□□ 0.42
Lig3-202ENSMUST00000080461 PtprgQ05909 1442 aa17.7■□□□□ 0.42
Lig3-202ENSMUST00000080461 Col17a1Q07563 1470 aa17.69■□□□□ 0.42
Lig3-202ENSMUST00000080461 Trak1Q6PD31 939 aa17.68■□□□□ 0.42
Lig3-202ENSMUST00000080461 DroshaQ5HZJ0 1373 aaKnown RBP17.67■□□□□ 0.42
Lig3-202ENSMUST00000080461 Nop58Q6DFW4 536 aaKnown RBP17.67■□□□□ 0.42
Lig3-202ENSMUST00000080461 Asxl1P59598 1514 aa17.67■□□□□ 0.42
Lig3-202ENSMUST00000080461 Spag9Q58A65 1321 aaKnown RBP17.67■□□□□ 0.42
Lig3-202ENSMUST00000080461 Map3k5O35099 1380 aa17.66■□□□□ 0.42
Lig3-202ENSMUST00000080461 Lemd3Q9WU40 921 aa17.66■□□□□ 0.42
Lig3-202ENSMUST00000080461 Xrn1P97789 1719 aaKnown RBP17.66■□□□□ 0.42
Lig3-202ENSMUST00000080461 Dhx9O70133 1380 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 39.4 ms