RNA–Protein interactions for RNA: ENSMUST00000077303.3

Ptpra-202, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

TSL 1 (best) BASIC

Gene Ptpra, Length 3,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-202ENSMUST00000077303 Col17a1Q07563 1470 aa9.7□□□□□ -0.86
Ptpra-202ENSMUST00000077303 PxdnQ3UQ28 1475 aa9.69□□□□□ -0.86
Ptpra-202ENSMUST00000077303 Znf316Q6PGE4 1016 aa9.69□□□□□ -0.86
Ptpra-202ENSMUST00000077303 Neo1P97798 1493 aa9.69□□□□□ -0.86
Ptpra-202ENSMUST00000077303 Scaf1Q5U4C3 1256 aaKnown RBP9.69□□□□□ -0.86
Ptpra-202ENSMUST00000077303 Rtl5Q5DTT4 599 aa9.68□□□□□ -0.86
Ptpra-202ENSMUST00000077303 Ppp1r18Q8BQ30 594 aa9.68□□□□□ -0.86
Ptpra-202ENSMUST00000077303 A2mQ6GQT1 1474 aa9.68□□□□□ -0.86
Ptpra-202ENSMUST00000077303 Fhod3Q76LL6 1578 aa9.68□□□□□ -0.86
Ptpra-202ENSMUST00000077303 Cul7Q8VE73 1689 aa9.67□□□□□ -0.86
Ptpra-202ENSMUST00000077303 Ccer2J3QPU5 274 aa9.67□□□□□ -0.86
Ptpra-202ENSMUST00000077303 Gtf3c3Q3TMP1 882 aa9.67□□□□□ -0.86
Ptpra-202ENSMUST00000077303 BC005561E9Q5E2 1589 aa9.66□□□□□ -0.86
Ptpra-202ENSMUST00000077303 Kif27Q7M6Z4 1394 aa9.66□□□□□ -0.86
Ptpra-202ENSMUST00000077303 NexmifQ5DTT1 1515 aa9.66□□□□□ -0.86
Ptpra-202ENSMUST00000077303 Plcd4Q8K3R3 807 aa9.66□□□□□ -0.86
Ptpra-202ENSMUST00000077303 Ythdc2B2RR83 1445 aaKnown RBP9.65□□□□□ -0.86
Ptpra-202ENSMUST00000077303 Ccnb3Q810T2 1396 aa9.65□□□□□ -0.86
Ptpra-202ENSMUST00000077303 UacaQ8CGB3 1411 aa9.65□□□□□ -0.86
Ptpra-202ENSMUST00000077303 Eid3Q3V124 375 aa9.65□□□□□ -0.86
Ptpra-202ENSMUST00000077303 Gapvd1Q6PAR5 1458 aa9.64□□□□□ -0.87
Ptpra-202ENSMUST00000077303 Fam50aQ9WV03 339 aaKnown RBP9.64□□□□□ -0.87
Ptpra-202ENSMUST00000077303 Zfp777B9EKF4 885 aa9.64□□□□□ -0.87
Ptpra-202ENSMUST00000077303 Rapgef6Q5NCJ1 1609 aa9.64□□□□□ -0.87
Ptpra-202ENSMUST00000077303 Dennd4bQ3U1Y4 1499 aa9.63□□□□□ -0.87
Ptpra-202ENSMUST00000077303 Slc4a1apE9PX68 744 aa9.63□□□□□ -0.87
Ptpra-202ENSMUST00000077303 Abcc2Q8VI47 1543 aa9.62□□□□□ -0.87
Ptpra-202ENSMUST00000077303 Cdc42bpaQ3UU96 1719 aa9.62□□□□□ -0.87
Ptpra-202ENSMUST00000077303 WrnO09053 1401 aa9.62□□□□□ -0.87
Ptpra-202ENSMUST00000077303 Abcc1O35379 1528 aa9.61□□□□□ -0.87
Ptpra-202ENSMUST00000077303 PtprtQ99M80 1454 aa9.61□□□□□ -0.87
Ptpra-202ENSMUST00000077303 Rfx7F8VPJ6 1459 aa9.6□□□□□ -0.87
Ptpra-202ENSMUST00000077303 Camsap2Q8C1B1 1461 aa9.6□□□□□ -0.87
Ptpra-202ENSMUST00000077303 Arhgef11Q68FM7 1552 aa9.6□□□□□ -0.87
Ptpra-202ENSMUST00000077303 Mug1P28665 1476 aa9.59□□□□□ -0.87
Ptpra-202ENSMUST00000077303 Jph4Q80WT0 628 aa9.59□□□□□ -0.87
Ptpra-202ENSMUST00000077303 Mapk8ip2Q9ERE9 830 aa9.59□□□□□ -0.87
Ptpra-202ENSMUST00000077303 Adgrl3Q80TS3 1537 aa9.59□□□□□ -0.87
Ptpra-202ENSMUST00000077303 Q8BT18 775 aa9.59□□□□□ -0.87
Ptpra-202ENSMUST00000077303 Tnnt3Q9QZ47 272 aa9.58□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Setbp1Q9Z180 1582 aa9.58□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Ncbp3Q8BZR9 615 aaKnown RBP9.57□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Kiaa1551Q5DTW7 1521 aa9.57□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Gm14025A2AP89 1413 aa9.57□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Cep170Q6A065 1588 aa9.57□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Ncoa3O09000 1398 aa9.56□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Kcna4Q61423 654 aa9.56□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Map3k4O08648 1597 aa9.56□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Zcchc11B2RX14 1644 aaKnown RBP9.55□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Ncoa2Q61026 1462 aa9.54□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Adcy10Q8C0T9 1614 aa9.54□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Kif21bQ9QXL1 1668 aa9.54□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Kdm6bQ5NCY0 1641 aa9.54□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Arhgef40Q3UPH7 1517 aa9.53□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Dnmt1P13864 1620 aaKnown RBP9.53□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Lamc1P02468 1607 aaKnown RBP9.53□□□□□ -0.88
Ptpra-202ENSMUST00000077303 SafbD3YXK2 937 aaKnown RBP9.53□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Ipo4Q8VI75 1082 aa9.53□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Naip5Q9R016 1403 aa9.53□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Abcc5Q9R1X5 1436 aa9.53□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Plekhh2Q8C115 1491 aa9.52□□□□□ -0.88
Ptpra-202ENSMUST00000077303 Mroh2aD3Z750 1679 aa9.52□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Hspa5P20029 655 aaKnown RBP9.52□□□□□ -0.89
Ptpra-202ENSMUST00000077303 SphkapQ6NSW3 1687 aa9.51□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Mapkbp1Q6NS57 1503 aa9.51□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Znf608Q56A10 1511 aa9.51□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Arid3aQ62431 601 aa9.5□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Kdm3bQ6ZPY7 1562 aa9.5□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Ccdc141E9Q8Q6 1531 aa9.5□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Dhx57Q6P5D3 1388 aaKnown RBP9.5□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Rrbp1Q99PL5 1605 aaKnown RBP9.5□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Irx3P81067 507 aa9.5□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Dnajc5gQ8C632 165 aa9.5□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Chic2Q9D9G3 165 aa9.5□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Arhgap31A6X8Z5 1425 aa9.49□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Hnrnpul2Q00PI9 745 aaKnown RBP9.49□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Magi1Q6RHR9 1471 aa9.49□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Gm13697A2AK42 830 aa9.49□□□□□ -0.89
Ptpra-202ENSMUST00000077303 NclP09405 707 aaKnown RBP9.48□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Anp32aO35381 247 aa9.48□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Il16O54824 1322 aa9.48□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Pprc1Q6NZN1 1644 aa9.47□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Prex2Q3LAC4 1598 aa9.47□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Fam163aQ8CAA5 168 aa9.46□□□□□ -0.89
Ptpra-202ENSMUST00000077303 Mphosph9A6H5Y1 991 aa9.46□□□□□ -0.9
Ptpra-202ENSMUST00000077303 Zbtb7cQ8VCZ7 619 aa9.46□□□□□ -0.9
Ptpra-202ENSMUST00000077303 Cabp1Q9JLK7 227 aa9.46□□□□□ -0.9
Ptpra-202ENSMUST00000077303 Mtus2Q3UHD3 1353 aa9.45□□□□□ -0.9
Ptpra-202ENSMUST00000077303 Upf2A2AT37 1269 aaKnown RBP9.45□□□□□ -0.9
Ptpra-202ENSMUST00000077303 AampJ3QN89 436 aa9.45□□□□□ -0.9
Ptpra-202ENSMUST00000077303 Ccdc9Q8VC31 543 aaKnown RBP9.45□□□□□ -0.9
Ptpra-202ENSMUST00000077303 Mlh3A0A1Y7VMP7 1443 aa9.45□□□□□ -0.9
Ptpra-202ENSMUST00000077303 Rprd2Q6NXI6 1469 aaKnown RBP9.45□□□□□ -0.9
Ptpra-202ENSMUST00000077303 AlkP97793 1621 aa9.45□□□□□ -0.9
Ptpra-202ENSMUST00000077303 Arhgef12Q8R4H2 1543 aaKnown RBP9.45□□□□□ -0.9
Ptpra-202ENSMUST00000077303 Chd1P40201 1711 aa9.45□□□□□ -0.9
Ptpra-202ENSMUST00000077303 Caskin1Q6P9K8 1431 aa9.44□□□□□ -0.9
Ptpra-202ENSMUST00000077303 Fam208aQ69ZR9 1610 aaKnown RBP9.44□□□□□ -0.9
Ptpra-202ENSMUST00000077303 Adgrb2Q8CGM1 1561 aa9.44□□□□□ -0.9
Ptpra-202ENSMUST00000077303 MlecQ6ZQI3 291 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms