RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Chmp5Q9D7S9 219 aa16■□□□□ 0.15
Ccdc88c-201ENSMUST00000068411 Exoc6Q8R313 802 aa15.99■□□□□ 0.15
Ccdc88c-201ENSMUST00000068411 Prm3Q62100 101 aa15.99■□□□□ 0.15
Ccdc88c-201ENSMUST00000068411 CgnP59242 1191 aa15.99■□□□□ 0.15
Ccdc88c-201ENSMUST00000068411 Rtf1A2AQ19 715 aaKnown RBP15.98■□□□□ 0.15
Ccdc88c-201ENSMUST00000068411 Rsf1E9PWW9 1441 aaKnown RBP15.98■□□□□ 0.15
Ccdc88c-201ENSMUST00000068411 Adam1bQ8R534 806 aa15.98■□□□□ 0.15
Ccdc88c-201ENSMUST00000068411 MlecQ6ZQI3 291 aaKnown RBP15.97■□□□□ 0.15
Ccdc88c-201ENSMUST00000068411 Ifit1bl1D3Z6F0 470 aa15.97■□□□□ 0.15
Ccdc88c-201ENSMUST00000068411 Ppp1r18Q8BQ30 594 aa15.96■□□□□ 0.15
Ccdc88c-201ENSMUST00000068411 Birc3O08863 600 aa15.95■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Mfap1aC0HKD8 439 aaKnown RBP15.95■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Mfap1bC0HKD9 439 aaKnown RBP15.95■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Mical1Q8VDP3 1048 aa15.95■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Sox12Q04890 314 aa15.95■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 GorabQ8BRM2 368 aa15.94■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Dnai1Q8C0M8 701 aa15.94■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Golga3P55937 1487 aa15.94■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Tnnt2P50752 301 aa15.94■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 U2af1Q9D883 239 aaKnown RBP15.94■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Tcerg1Q8CGF7 1100 aaKnown RBP15.94■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Pkd2O35245 966 aa15.93■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Ccdc18Q640L5 1455 aa15.92■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Pibf1E9Q6K3 756 aa15.92■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Map4P27546 1125 aaKnown RBP15.92■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 AU015836B2RUM3 263 aa15.92■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Iffo2Q8R2V2 512 aa15.92■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 CrebrfQ8CDG5 640 aaKnown RBP15.91■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Taok2Q6ZQ29 1240 aa15.9■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Slc4a1apE9PX68 744 aa15.9■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 HnrnpuQ8VEK3 800 aaKnown RBP15.9■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Isy1Q69ZQ2 285 aaKnown RBP15.9■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Mak16Q8BGS0 296 aaKnown RBP15.9■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Arid3cA6PWV5 409 aa15.89■□□□□ 0.14
Ccdc88c-201ENSMUST00000068411 Q3TQI7 289 aaKnown RBP15.89■□□□□ 0.13
Ccdc88c-201ENSMUST00000068411 EspnQ9ET47 871 aa15.89■□□□□ 0.13
Ccdc88c-201ENSMUST00000068411 Gpatch11Q3UFS4 262 aa15.89■□□□□ 0.13
Ccdc88c-201ENSMUST00000068411 Dcaf11Q91VU6 549 aa15.89■□□□□ 0.13
Ccdc88c-201ENSMUST00000068411 CrbnQ8C7D2 445 aa15.88■□□□□ 0.13
Ccdc88c-201ENSMUST00000068411 Gtf2e1Q9D0D5 440 aa15.87■□□□□ 0.13
Ccdc88c-201ENSMUST00000068411 Mbd3Q9Z2D8 285 aaKnown RBP15.87■□□□□ 0.13
Ccdc88c-201ENSMUST00000068411 MecomP14404 1042 aa15.87■□□□□ 0.13
Ccdc88c-201ENSMUST00000068411 Fhad1A6PWD2 1420 aa15.87■□□□□ 0.13
Ccdc88c-201ENSMUST00000068411 MsnP26041 577 aaKnown RBP15.86■□□□□ 0.13
Ccdc88c-201ENSMUST00000068411 Trak1Q6PD31 939 aa15.86■□□□□ 0.13
Ccdc88c-201ENSMUST00000068411 Mia2Q91ZV0 1396 aa15.86■□□□□ 0.13
Ccdc88c-201ENSMUST00000068411 Sart3Q9JLI8 962 aaKnown RBP15.85■□□□□ 0.13
Ccdc88c-201ENSMUST00000068411 Tmf1B9EKI3 1091 aa15.85■□□□□ 0.13
Ccdc88c-201ENSMUST00000068411 Golga2Q921M4 999 aa15.85■□□□□ 0.13
Ccdc88c-201ENSMUST00000068411 ChgaP26339 463 aaKnown RBP15.84■□□□□ 0.13
Ccdc88c-201ENSMUST00000068411 Brpf1B2RRD7 1212 aa15.84■□□□□ 0.13
Ccdc88c-201ENSMUST00000068411 Gm973E9Q295 1059 aa15.83■□□□□ 0.12
Ccdc88c-201ENSMUST00000068411 Nol10Q5RJG1 687 aaKnown RBP15.82■□□□□ 0.12
Ccdc88c-201ENSMUST00000068411 Zscan21Q07231 555 aa15.82■□□□□ 0.12
Ccdc88c-201ENSMUST00000068411 SlkO54988 1233 aa15.82■□□□□ 0.12
Ccdc88c-201ENSMUST00000068411 Ipo8Q7TMY7 1010 aa15.82■□□□□ 0.12
Ccdc88c-201ENSMUST00000068411 Ipo9Q91YE6 1041 aa15.81■□□□□ 0.12
Ccdc88c-201ENSMUST00000068411 Ksr2Q3UVC0 959 aa15.8■□□□□ 0.12
Ccdc88c-201ENSMUST00000068411 Chmp3Q9CQ10 224 aa15.79■□□□□ 0.12
Ccdc88c-201ENSMUST00000068411 Zfp777B9EKF4 885 aa15.79■□□□□ 0.12
Ccdc88c-201ENSMUST00000068411 Psme1P97371 249 aa15.79■□□□□ 0.12
Ccdc88c-201ENSMUST00000068411 Noc3lQ8VI84 807 aaKnown RBP15.79■□□□□ 0.12
Ccdc88c-201ENSMUST00000068411 Chrna2Q91X60 512 aa15.79■□□□□ 0.12
Ccdc88c-201ENSMUST00000068411 Kiaa0754Q69ZZ9 979 aa15.78■□□□□ 0.12
Ccdc88c-201ENSMUST00000068411 Ercc6F8VPZ5 1481 aa15.78■□□□□ 0.12
Ccdc88c-201ENSMUST00000068411 Kif27Q7M6Z4 1394 aa15.77■□□□□ 0.11
Ccdc88c-201ENSMUST00000068411 Cabp1Q9JLK7 227 aa15.77■□□□□ 0.11
Ccdc88c-201ENSMUST00000068411 Calcoco2A2A6M5 331 aa15.76■□□□□ 0.11
Ccdc88c-201ENSMUST00000068411 Mphosph9A6H5Y1 991 aa15.76■□□□□ 0.11
Ccdc88c-201ENSMUST00000068411 Eif4g2Q62448 906 aaKnown RBP15.76■□□□□ 0.11
Ccdc88c-201ENSMUST00000068411 Txndc2Q6P902 515 aa15.74■□□□□ 0.11
Ccdc88c-201ENSMUST00000068411 Samd1D3YXK1 519 aa15.73■□□□□ 0.11
Ccdc88c-201ENSMUST00000068411 Tpm3-rs7D3Z2H9 248 aa15.73■□□□□ 0.11
Ccdc88c-201ENSMUST00000068411 Ccdc146E9Q9F7 977 aa15.73■□□□□ 0.11
Ccdc88c-201ENSMUST00000068411 Ncbp3Q8BZR9 615 aaKnown RBP15.73■□□□□ 0.11
Ccdc88c-201ENSMUST00000068411 AknaQ80VW7 1404 aa15.73■□□□□ 0.11
Ccdc88c-201ENSMUST00000068411 Nolc1E9Q5C9 702 aaKnown RBP15.71■□□□□ 0.11
Ccdc88c-201ENSMUST00000068411 PtmsQ9D0J8 101 aaKnown RBP15.71■□□□□ 0.11
Ccdc88c-201ENSMUST00000068411 Vps53Q8CCB4 832 aa15.71■□□□□ 0.11
Ccdc88c-201ENSMUST00000068411 Spag9Q58A65 1321 aaKnown RBP15.7■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 Rock2P70336 1388 aa15.7■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 Aebp1Q640N1 1128 aa15.7■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 Arid4aF8VPQ2 1261 aaKnown RBP15.69■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 Slc4a10Q5DTL9 1118 aa15.69■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 Ciz1Q8VEH2 845 aa15.69■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 RdxP26043 583 aaKnown RBP15.69■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 R3hcc1Q8BSI6 488 aa15.69■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 NacadQ5SWP3 1504 aa15.68■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 Rpap1Q80TE0 1409 aa15.68■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 Cald1E9QA15 768 aaKnown RBP15.68■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 Cc2d1aQ8K1A6 943 aa15.67■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 Ccer1Q9CQL2 403 aa15.66■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 Rrp12Q6P5B0 1295 aaKnown RBP15.66■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 Srcin1Q9QWI6 1250 aa15.66■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 Baz1aO88379 1555 aa15.66■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 Trim30aP15533 496 aa15.65■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 Pde3bQ61409 1100 aa15.65■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 Fan1Q69ZT1 1020 aa15.65■□□□□ 0.1
Ccdc88c-201ENSMUST00000068411 Ccar1Q8CH18 1146 aaKnown RBP15.64■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 BccipQ9CWI3 316 aa15.64■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms