RNA–Protein interactions for RNA: ENSMUST00000053856.5

Pcdhb17-201, Transcript of MCG141290, mousemouse

APPRIS P1 BASIC

Gene Pcdhb17, Length 4,660 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17-201ENSMUST00000053856 Prdm16A2A935 1275 aa14.69□□□□□ -0.06
Pcdhb17-201ENSMUST00000053856 Rock2P70336 1388 aa14.69□□□□□ -0.06
Pcdhb17-201ENSMUST00000053856 Ggt6Q6PDE7 497 aa14.68□□□□□ -0.06
Pcdhb17-201ENSMUST00000053856 Cc2d2bA0A286YDU8 1405 aa14.68□□□□□ -0.06
Pcdhb17-201ENSMUST00000053856 NgefQ8CHT1 710 aa14.68□□□□□ -0.06
Pcdhb17-201ENSMUST00000053856 Trak1Q6PD31 939 aa14.67□□□□□ -0.06
Pcdhb17-201ENSMUST00000053856 Mphosph9A6H5Y1 991 aa14.67□□□□□ -0.06
Pcdhb17-201ENSMUST00000053856 Pde3bQ61409 1100 aa14.67□□□□□ -0.06
Pcdhb17-201ENSMUST00000053856 Ofd1Q80Z25 1017 aa14.67□□□□□ -0.06
Pcdhb17-201ENSMUST00000053856 Tmf1B9EKI3 1091 aa14.66□□□□□ -0.06
Pcdhb17-201ENSMUST00000053856 CadpsQ80TJ1 1355 aa14.66□□□□□ -0.06
Pcdhb17-201ENSMUST00000053856 Urb2E9Q7L1 1524 aaKnown RBP14.65□□□□□ -0.06
Pcdhb17-201ENSMUST00000053856 CenpjQ569L8 1344 aa14.65□□□□□ -0.06
Pcdhb17-201ENSMUST00000053856 Ift140E9PY46 1464 aa14.65□□□□□ -0.06
Pcdhb17-201ENSMUST00000053856 Ccdc27Q3V036 639 aa14.65□□□□□ -0.06
Pcdhb17-201ENSMUST00000053856 Nsd2Q8BVE8 1365 aa14.65□□□□□ -0.06
Pcdhb17-201ENSMUST00000053856 Rangap1P46061 589 aaKnown RBP14.64□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 Rtf1A2AQ19 715 aaKnown RBP14.64□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 Znf326O88291 580 aa14.63□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 Mbd3Q9Z2D8 285 aaKnown RBP14.63□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 NrkQ9R0G8 1455 aa14.63□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 Ifit1bl1D3Z6F0 470 aa14.63□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 Shroom4Q1W617 1475 aa14.63□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 Trim30dE9PWL0 497 aa14.62□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 Spag9Q58A65 1321 aaKnown RBP14.62□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 Gm6268A2A3U9 297 aa14.61□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 Rab11fip3Q8CHD8 1047 aa14.61□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 Rapgef2Q8CHG7 1496 aa14.61□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 Cux1P53564 1515 aa14.61□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 Hsp90ab1P11499 724 aaKnown RBP14.6□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 DekQ7TNV0 380 aaKnown RBP14.6□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 HnrnpuQ8VEK3 800 aaKnown RBP14.6□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 Ap3b2Q9JME5 1082 aa14.6□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 Srcin1Q9QWI6 1250 aa14.59□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 Top2aQ01320 1528 aaKnown RBP14.59□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 Rundc1Q0VDN7 615 aa14.59□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 Trim44Q9QXA7 346 aa14.59□□□□□ -0.07
Pcdhb17-201ENSMUST00000053856 SafbD3YXK2 937 aaKnown RBP14.57□□□□□ -0.08
Pcdhb17-201ENSMUST00000053856 PogzQ8BZH4 1409 aaKnown RBP14.57□□□□□ -0.08
Pcdhb17-201ENSMUST00000053856 Map7O88735 730 aa14.56□□□□□ -0.08
Pcdhb17-201ENSMUST00000053856 Duox2A2AQ99 1517 aa14.55□□□□□ -0.08
Pcdhb17-201ENSMUST00000053856 Bcl11aQ9QYE3 773 aa14.54□□□□□ -0.08
Pcdhb17-201ENSMUST00000053856 Stk26Q99JT2 416 aa14.54□□□□□ -0.08
Pcdhb17-201ENSMUST00000053856 Arhgap31A6X8Z5 1425 aa14.54□□□□□ -0.08
Pcdhb17-201ENSMUST00000053856 Igf1rQ60751 1373 aa14.53□□□□□ -0.08
Pcdhb17-201ENSMUST00000053856 Sart3Q9JLI8 962 aaKnown RBP14.53□□□□□ -0.08
Pcdhb17-201ENSMUST00000053856 Utp14aQ640M1 767 aaKnown RBP14.52□□□□□ -0.08
Pcdhb17-201ENSMUST00000053856 Vsig10D3YX43 558 aa14.52□□□□□ -0.09
Pcdhb17-201ENSMUST00000053856 Htatsf1Q8BGC0 757 aa14.52□□□□□ -0.09
Pcdhb17-201ENSMUST00000053856 Map3k1P53349 1493 aa14.52□□□□□ -0.09
Pcdhb17-201ENSMUST00000053856 Gm14025A2AP89 1413 aa14.51□□□□□ -0.09
Pcdhb17-201ENSMUST00000053856 Hspa5P20029 655 aaKnown RBP14.5□□□□□ -0.09
Pcdhb17-201ENSMUST00000053856 Fam163aQ8CAA5 168 aa14.5□□□□□ -0.09
Pcdhb17-201ENSMUST00000053856 CatipB9EKE5 520 aa14.5□□□□□ -0.09
Pcdhb17-201ENSMUST00000053856 Ppm1gQ61074 542 aa14.5□□□□□ -0.09
Pcdhb17-201ENSMUST00000053856 Frmpd1A2AKB4 1549 aa14.5□□□□□ -0.09
Pcdhb17-201ENSMUST00000053856 Ythdc1E9Q5K9 736 aaKnown RBP14.49□□□□□ -0.09
Pcdhb17-201ENSMUST00000053856 Lmod3E9QA62 571 aa14.49□□□□□ -0.09
Pcdhb17-201ENSMUST00000053856 Trim26Q99PN3 545 aa14.49□□□□□ -0.09
Pcdhb17-201ENSMUST00000053856 Dnai2A2AC93 623 aa14.48□□□□□ -0.09
Pcdhb17-201ENSMUST00000053856 Irx6Q9ER75 438 aa14.48□□□□□ -0.09
Pcdhb17-201ENSMUST00000053856 ErbinQ80TH2 1402 aa14.48□□□□□ -0.09
Pcdhb17-201ENSMUST00000053856 Nol10Q5RJG1 687 aaKnown RBP14.47□□□□□ -0.09
Pcdhb17-201ENSMUST00000053856 Tdrd9Q14BI7 1383 aa14.46□□□□□ -0.1
Pcdhb17-201ENSMUST00000053856 Cnga1P29974 684 aa14.45□□□□□ -0.1
Pcdhb17-201ENSMUST00000053856 Hmgb2P30681 210 aaKnown RBP14.45□□□□□ -0.1
Pcdhb17-201ENSMUST00000053856 Zscan21Q07231 555 aa14.45□□□□□ -0.1
Pcdhb17-201ENSMUST00000053856 KnstrnQ9D9Z1 312 aaKnown RBP14.44□□□□□ -0.1
Pcdhb17-201ENSMUST00000053856 Grin2bQ01097 1482 aa14.43□□□□□ -0.1
Pcdhb17-201ENSMUST00000053856 Irx3P81067 507 aa14.43□□□□□ -0.1
Pcdhb17-201ENSMUST00000053856 Rwdd1Q9CQK7 243 aa14.43□□□□□ -0.1
Pcdhb17-201ENSMUST00000053856 Apbb1Q9QXJ1 710 aa14.42□□□□□ -0.1
Pcdhb17-201ENSMUST00000053856 Plcb2A3KGF7 1181 aa14.41□□□□□ -0.1
Pcdhb17-201ENSMUST00000053856 U2af1Q9D883 239 aaKnown RBP14.41□□□□□ -0.1
Pcdhb17-201ENSMUST00000053856 Ciz1Q8VEH2 845 aa14.41□□□□□ -0.1
Pcdhb17-201ENSMUST00000053856 Wdr62Q3U3T8 1523 aa14.4□□□□□ -0.1
Pcdhb17-201ENSMUST00000053856 MccE9PWI3 1003 aa14.4□□□□□ -0.1
Pcdhb17-201ENSMUST00000053856 Q3TQI7 289 aaKnown RBP14.4□□□□□ -0.1
Pcdhb17-201ENSMUST00000053856 Gm7298A0A0N4SVU1 1476 aa14.4□□□□□ -0.1
Pcdhb17-201ENSMUST00000053856 Neurod2Q62414 383 aa14.39□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 Tcerg1Q8CGF7 1100 aaKnown RBP14.39□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 FanciQ8K368 1330 aa14.39□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 Fan1Q69ZT1 1020 aa14.39□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 Wwc2Q6NXJ0 1187 aa14.39□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 Dcaf11Q91VU6 549 aa14.39□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 Birc3O08863 600 aa14.38□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 Pes1Q9EQ61 584 aaKnown RBP14.38□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 PtmaP26350 111 aa14.38□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 Mak16Q8BGS0 296 aaKnown RBP14.38□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 Rad54l2Q99NG0 1466 aa14.38□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 Shq1Q7TMX5 569 aa14.38□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 Golga2Q921M4 999 aa14.38□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 1700019A02RikA0A087WPV9 146 aa14.36□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 PtmsQ9D0J8 101 aaKnown RBP14.36□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 Ccdc141E9Q8Q6 1531 aa14.36□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 Sox12Q04890 314 aa14.36□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 Slc4a3P16283 1227 aa14.35□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 AampJ3QN89 436 aa14.35□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 Dbr1Q923B1 550 aa14.35□□□□□ -0.11
Pcdhb17-201ENSMUST00000053856 Ankrd36D3Z4K0 1415 aa14.35□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms