RNA–Protein interactions for RNA: ENSMUST00000037811.12

Apob-202, Transcript of Apolipoprotein B-100, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Apob, Length 13,934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Apob-202ENSMUST00000037811 Ythdc1E9Q5K9 736 aaKnown RBP6,31□□□□□ -1,4
Apob-202ENSMUST00000037811 CenpjQ569L8 1344 aa6,31□□□□□ -1,4
Apob-202ENSMUST00000037811 DaxxO35613 739 aa6,3□□□□□ -1,4
Apob-202ENSMUST00000037811 Mrs2Q5NCE8 434 aa6,3□□□□□ -1,4
Apob-202ENSMUST00000037811 LrpprcQ6PB66 1392 aaKnown RBP6,3□□□□□ -1,4
Apob-202ENSMUST00000037811 Tmf1B9EKI3 1091 aa6,3□□□□□ -1,4
Apob-202ENSMUST00000037811 Sh3bp5Q9Z131 463 aa6,3□□□□□ -1,4
Apob-202ENSMUST00000037811 Atf3Q60765 181 aa6,29□□□□□ -1,4
Apob-202ENSMUST00000037811 Pak3Q61036 559 aa6,29□□□□□ -1,4
Apob-202ENSMUST00000037811 Trim26Q99PN3 545 aa6,28□□□□□ -1,4
Apob-202ENSMUST00000037811 KnstrnQ9D9Z1 312 aaKnown RBP6,28□□□□□ -1,4
Apob-202ENSMUST00000037811 Mbd3Q9Z2D8 285 aaKnown RBP6,28□□□□□ -1,4
Apob-202ENSMUST00000037811 Fam71e1A1L3C1 212 aa6,28□□□□□ -1,4
Apob-202ENSMUST00000037811 Kif3bQ61771 747 aa6,28□□□□□ -1,4
Apob-202ENSMUST00000037811 Clstn1Q9EPL2 979 aa6,28□□□□□ -1,4
Apob-202ENSMUST00000037811 Arhgap35Q91YM2 1499 aa6,27□□□□□ -1,41
Apob-202ENSMUST00000037811 Smc4Q8CG47 1286 aa6,27□□□□□ -1,41
Apob-202ENSMUST00000037811 Sirt1Q923E4 737 aa6,27□□□□□ -1,41
Apob-202ENSMUST00000037811 PtmsQ9D0J8 101 aaKnown RBP6,27□□□□□ -1,41
Apob-202ENSMUST00000037811 Aebp1Q640N1 1128 aa6,27□□□□□ -1,41
Apob-202ENSMUST00000037811 Mapk8ip2Q9ERE9 830 aa6,27□□□□□ -1,41
Apob-202ENSMUST00000037811 Dhx29Q6PGC1 1365 aaKnown RBP6,27□□□□□ -1,41
Apob-202ENSMUST00000037811 Tpm3-rs7D3Z2H9 248 aa6,27□□□□□ -1,41
Apob-202ENSMUST00000037811 Q3TQI7 289 aaKnown RBP6,26□□□□□ -1,41
Apob-202ENSMUST00000037811 Ccdc88bQ4QRL3 1481 aa6,26□□□□□ -1,41
Apob-202ENSMUST00000037811 Nup155Q99P88 1391 aaKnown RBP6,26□□□□□ -1,41
Apob-202ENSMUST00000037811 Rock2P70336 1388 aa6,26□□□□□ -1,41
Apob-202ENSMUST00000037811 Sox12Q04890 314 aa6,26□□□□□ -1,41
Apob-202ENSMUST00000037811 Rassf8Q8CJ96 419 aa6,26□□□□□ -1,41
Apob-202ENSMUST00000037811 Cyb5rlB1AS42 316 aa6,25□□□□□ -1,41
Apob-202ENSMUST00000037811 Gnl3lQ6PGG6 577 aaKnown RBP6,25□□□□□ -1,41
Apob-202ENSMUST00000037811 Stk26Q99JT2 416 aa6,25□□□□□ -1,41
Apob-202ENSMUST00000037811 DekQ7TNV0 380 aaKnown RBP6,25□□□□□ -1,41
Apob-202ENSMUST00000037811 Wwc2Q6NXJ0 1187 aa6,25□□□□□ -1,41
Apob-202ENSMUST00000037811 ZgpatQ8VDM1 511 aa6,25□□□□□ -1,41
Apob-202ENSMUST00000037811 Hsp90b1P08113 802 aaKnown RBP6,25□□□□□ -1,41
Apob-202ENSMUST00000037811 Ccdc47Q9D024 483 aaKnown RBP6,25□□□□□ -1,41
Apob-202ENSMUST00000037811 CftrP26361 1476 aa6,25□□□□□ -1,41
Apob-202ENSMUST00000037811 1700019A02RikA0A087WPV9 146 aa6,25□□□□□ -1,41
Apob-202ENSMUST00000037811 Adam1bQ8R534 806 aa6,24□□□□□ -1,41
Apob-202ENSMUST00000037811 Gm973E9Q295 1059 aa6,24□□□□□ -1,41
Apob-202ENSMUST00000037811 Nsd2Q8BVE8 1365 aa6,24□□□□□ -1,41
Apob-202ENSMUST00000037811 Chmp7Q8R1T1 451 aa6,24□□□□□ -1,41
Apob-202ENSMUST00000037811 PtmaP26350 111 aa6,24□□□□□ -1,41
Apob-202ENSMUST00000037811 Iqgap2Q3UQ44 1575 aa6,24□□□□□ -1,41
Apob-202ENSMUST00000037811 Anapc15P60007 132 aa6,23□□□□□ -1,41
Apob-202ENSMUST00000037811 UacaQ8CGB3 1411 aa6,23□□□□□ -1,41
Apob-202ENSMUST00000037811 Fyb1O35601 819 aa6,23□□□□□ -1,41
Apob-202ENSMUST00000037811 Shroom4Q1W617 1475 aa6,23□□□□□ -1,41
Apob-202ENSMUST00000037811 ArxO35085 564 aa6,23□□□□□ -1,41
Apob-202ENSMUST00000037811 UvssaQ9D479 717 aa6,23□□□□□ -1,41
Apob-202ENSMUST00000037811 Cux1P53564 1515 aa6,22□□□□□ -1,41
Apob-202ENSMUST00000037811 Mrc2Q64449 1479 aa6,22□□□□□ -1,41
Apob-202ENSMUST00000037811 Utp14aQ640M1 767 aaKnown RBP6,22□□□□□ -1,41
Apob-202ENSMUST00000037811 Sart1Q9Z315 806 aaKnown RBP6,22□□□□□ -1,41
Apob-202ENSMUST00000037811 Ifit1bl1D3Z6F0 470 aa6,22□□□□□ -1,41
Apob-202ENSMUST00000037811 Hsp90ab1P11499 724 aaKnown RBP6,22□□□□□ -1,41
Apob-202ENSMUST00000037811 Chmp3Q9CQ10 224 aa6,22□□□□□ -1,41
Apob-202ENSMUST00000037811 Gsdma3Q5Y4Y6 464 aa6,22□□□□□ -1,41
Apob-202ENSMUST00000037811 Tnnt1O88346 262 aa6,21□□□□□ -1,41
Apob-202ENSMUST00000037811 Fgd6Q69ZL1 1399 aa6,21□□□□□ -1,41
Apob-202ENSMUST00000037811 Zeb2Q9R0G7 1215 aa6,21□□□□□ -1,42
Apob-202ENSMUST00000037811 Trim30dE9PWL0 497 aa6,21□□□□□ -1,42
Apob-202ENSMUST00000037811 Ofd1Q80Z25 1017 aa6,2□□□□□ -1,42
Apob-202ENSMUST00000037811 Cep162Q6ZQ06 1403 aa6,2□□□□□ -1,42
Apob-202ENSMUST00000037811 Prdm16A2A935 1275 aa6,2□□□□□ -1,42
Apob-202ENSMUST00000037811 Cnga1P29974 684 aa6,2□□□□□ -1,42
Apob-202ENSMUST00000037811 Cabp4Q8VHC5 271 aa6,2□□□□□ -1,42
Apob-202ENSMUST00000037811 Kcnn1Q9EQR3 537 aa6,2□□□□□ -1,42
Apob-202ENSMUST00000037811 Pkd2O35245 966 aa6,2□□□□□ -1,42
Apob-202ENSMUST00000037811 R3hcc1Q8BSI6 488 aa6,2□□□□□ -1,42
Apob-202ENSMUST00000037811 FanciQ8K368 1330 aa6,2□□□□□ -1,42
Apob-202ENSMUST00000037811 Calr4Q3TQS0 420 aa6,2□□□□□ -1,42
Apob-202ENSMUST00000037811 Jph4Q80WT0 628 aa6,2□□□□□ -1,42
Apob-202ENSMUST00000037811 Htatsf1Q8BGC0 757 aa6,2□□□□□ -1,42
Apob-202ENSMUST00000037811 Srcin1Q9QWI6 1250 aa6,19□□□□□ -1,42
Apob-202ENSMUST00000037811 Arhgap31A6X8Z5 1425 aa6,19□□□□□ -1,42
Apob-202ENSMUST00000037811 Birc3O08863 600 aa6,19□□□□□ -1,42
Apob-202ENSMUST00000037811 Casc1Q6TDU8 730 aa6,19□□□□□ -1,42
Apob-202ENSMUST00000037811 CadpsQ80TJ1 1355 aa6,19□□□□□ -1,42
Apob-202ENSMUST00000037811 Pip4k2bQ80XI4 416 aa6,19□□□□□ -1,42
Apob-202ENSMUST00000037811 Tomm22Q9CPQ3 142 aa6,19□□□□□ -1,42
Apob-202ENSMUST00000037811 Stk31Q99MW1 1018 aa6,19□□□□□ -1,42
Apob-202ENSMUST00000037811 U2af1Q9D883 239 aaKnown RBP6,19□□□□□ -1,42
Apob-202ENSMUST00000037811 GphnQ8BUV3 769 aaKnown RBP6,18□□□□□ -1,42
Apob-202ENSMUST00000037811 Trak1Q6PD31 939 aa6,18□□□□□ -1,42
Apob-202ENSMUST00000037811 Ccdc9Q8VC31 543 aaKnown RBP6,18□□□□□ -1,42
Apob-202ENSMUST00000037811 Plekhd1B2RPU2 505 aa6,18□□□□□ -1,42
Apob-202ENSMUST00000037811 ErbinQ80TH2 1402 aa6,18□□□□□ -1,42
Apob-202ENSMUST00000037811 Cc2d2bA0A286YDU8 1405 aa6,18□□□□□ -1,42
Apob-202ENSMUST00000037811 Vsig10D3YX43 558 aa6,18□□□□□ -1,42
Apob-202ENSMUST00000037811 Znf710Q3U288 666 aa6,18□□□□□ -1,42
Apob-202ENSMUST00000037811 Ecm2Q5FW85 670 aa6,18□□□□□ -1,42
Apob-202ENSMUST00000037811 Ift140E9PY46 1464 aa6,18□□□□□ -1,42
Apob-202ENSMUST00000037811 Gimap6Q8K349 305 aa6,18□□□□□ -1,42
Apob-202ENSMUST00000037811 Urb2E9Q7L1 1524 aaKnown RBP6,17□□□□□ -1,42
Apob-202ENSMUST00000037811 Cecr2E9Q2Z1 1453 aa6,17□□□□□ -1,42
Apob-202ENSMUST00000037811 Ccar1Q8CH18 1146 aaKnown RBP6,17□□□□□ -1,42
Apob-202ENSMUST00000037811 Trim44Q9QXA7 346 aa6,17□□□□□ -1,42
Apob-202ENSMUST00000037811 Cetn4Q8K4K1 168 aa6,17□□□□□ -1,42
Retrieved 100 of 22,080 RNA–protein pairs in 13,9 ms