RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Map7d2A2AG50 781 aa21.4■■□□□ 1.02
Col17a1-201ENSMUST00000026045 Gm20521D3Z5F7 333 aa21.4■■□□□ 1.02
Col17a1-201ENSMUST00000026045 Podxl2Q8CAE9 603 aa21.4■■□□□ 1.02
Col17a1-201ENSMUST00000026045 ChgaP26339 463 aaKnown RBP21.39■■□□□ 1.02
Col17a1-201ENSMUST00000026045 Arhgap35Q91YM2 1499 aa21.38■■□□□ 1.01
Col17a1-201ENSMUST00000026045 CntlnA2AM05 1397 aa21.37■■□□□ 1.01
Col17a1-201ENSMUST00000026045 Neurod2Q62414 383 aa21.36■■□□□ 1.01
Col17a1-201ENSMUST00000026045 Casc1Q6TDU8 730 aa21.36■■□□□ 1.01
Col17a1-201ENSMUST00000026045 Rpap1Q80TE0 1409 aa21.36■■□□□ 1.01
Col17a1-201ENSMUST00000026045 Cabp1Q9JLK7 227 aa21.35■■□□□ 1.01
Col17a1-201ENSMUST00000026045 Cux2P70298 1426 aa21.35■■□□□ 1.01
Col17a1-201ENSMUST00000026045 Mphosph9A6H5Y1 991 aa21.34■■□□□ 1.01
Col17a1-201ENSMUST00000026045 Stk24Q99KH8 431 aa21.33■■□□□ 1
Col17a1-201ENSMUST00000026045 Rundc1Q0VDN7 615 aa21.32■■□□□ 1
Col17a1-201ENSMUST00000026045 IqubQ8CDK3 788 aa21.32■■□□□ 1
Col17a1-201ENSMUST00000026045 Smarca4Q3TKT4 1613 aaKnown RBP21.32■■□□□ 1
Col17a1-201ENSMUST00000026045 Map4P27546 1125 aaKnown RBP21.32■■□□□ 1
Col17a1-201ENSMUST00000026045 Chmp5Q9D7S9 219 aa21.31■■□□□ 1
Col17a1-201ENSMUST00000026045 Rrp9Q91WM3 475 aaKnown RBP21.3■■□□□ 1
Col17a1-201ENSMUST00000026045 Mbd3Q9Z2D8 285 aaKnown RBP21.3■■□□□ 1
Col17a1-201ENSMUST00000026045 Cttnbp2B9EJA2 1648 aa21.29■■□□□ 1
Col17a1-201ENSMUST00000026045 Fgd1P52734 960 aa21.29■■□□□ 1
Col17a1-201ENSMUST00000026045 SlkO54988 1233 aa21.28■■□□□ 1
Col17a1-201ENSMUST00000026045 Exoc6Q8R313 802 aa21.28■■□□□ 1
Col17a1-201ENSMUST00000026045 Safb2Q80YR5 991 aaKnown RBP21.27■■□□□ 1
Col17a1-201ENSMUST00000026045 Kiaa0754Q69ZZ9 979 aa21.27■■□□□ 1
Col17a1-201ENSMUST00000026045 Trak1Q6PD31 939 aa21.27■■□□□ 1
Col17a1-201ENSMUST00000026045 Becn1O88597 448 aa21.26■□□□□ 0.99
Col17a1-201ENSMUST00000026045 EspnQ9ET47 871 aa21.26■□□□□ 0.99
Col17a1-201ENSMUST00000026045 Calcoco2A2A6M5 331 aa21.26■□□□□ 0.99
Col17a1-201ENSMUST00000026045 Atad2bE9Q166 1460 aaKnown RBP21.25■□□□□ 0.99
Col17a1-201ENSMUST00000026045 Exosc9Q9JHI7 438 aaKnown RBP21.25■□□□□ 0.99
Col17a1-201ENSMUST00000026045 Carmil1Q6EDY6 1374 aa21.23■□□□□ 0.99
Col17a1-201ENSMUST00000026045 Map7O88735 730 aa21.22■□□□□ 0.99
Col17a1-201ENSMUST00000026045 Ush1cQ9ES64 910 aa21.21■□□□□ 0.99
Col17a1-201ENSMUST00000026045 Cnga1P29974 684 aa21.2■□□□□ 0.98
Col17a1-201ENSMUST00000026045 Gtf2a1Q99PM3 378 aa21.19■□□□□ 0.98
Col17a1-201ENSMUST00000026045 Stag3O70576 1240 aa21.18■□□□□ 0.98
Col17a1-201ENSMUST00000026045 Ipo8Q7TMY7 1010 aa21.18■□□□□ 0.98
Col17a1-201ENSMUST00000026045 Armcx1Q9CX83 456 aa21.18■□□□□ 0.98
Col17a1-201ENSMUST00000026045 Mre11Q61216 706 aa21.17■□□□□ 0.98
Col17a1-201ENSMUST00000026045 Ifit1bl1D3Z6F0 470 aa21.16■□□□□ 0.98
Col17a1-201ENSMUST00000026045 Gm973E9Q295 1059 aa21.15■□□□□ 0.98
Col17a1-201ENSMUST00000026045 Gtf3c5Q8R2T8 520 aa21.14■□□□□ 0.98
Col17a1-201ENSMUST00000026045 Phldb1Q6PDH0 1371 aaKnown RBP21.14■□□□□ 0.98
Col17a1-201ENSMUST00000026045 Ccnb3Q810T2 1396 aa21.14■□□□□ 0.97
Col17a1-201ENSMUST00000026045 Mak16Q8BGS0 296 aaKnown RBP21.13■□□□□ 0.97
Col17a1-201ENSMUST00000026045 AknaQ80VW7 1404 aa21.13■□□□□ 0.97
Col17a1-201ENSMUST00000026045 Fam43aQ8BUP8 424 aa21.13■□□□□ 0.97
Col17a1-201ENSMUST00000026045 Mapk8ip3Q9ESN9 1337 aa21.12■□□□□ 0.97
Col17a1-201ENSMUST00000026045 Trim30aP15533 496 aa21.12■□□□□ 0.97
Col17a1-201ENSMUST00000026045 Irx6Q9ER75 438 aa21.11■□□□□ 0.97
Col17a1-201ENSMUST00000026045 Rwdd1Q9CQK7 243 aa21.1■□□□□ 0.97
Col17a1-201ENSMUST00000026045 Gm6268A2A3U9 297 aa21.07■□□□□ 0.96
Col17a1-201ENSMUST00000026045 LrpprcQ6PB66 1392 aaKnown RBP21.07■□□□□ 0.96
Col17a1-201ENSMUST00000026045 PtmsQ9D0J8 101 aaKnown RBP21.07■□□□□ 0.96
Col17a1-201ENSMUST00000026045 Sart3Q9JLI8 962 aaKnown RBP21.07■□□□□ 0.96
Col17a1-201ENSMUST00000026045 Fhad1A6PWD2 1420 aa21.06■□□□□ 0.96
Col17a1-201ENSMUST00000026045 Gpatch11Q3UFS4 262 aa21.06■□□□□ 0.96
Col17a1-201ENSMUST00000026045 RdxP26043 583 aaKnown RBP21.06■□□□□ 0.96
Col17a1-201ENSMUST00000026045 Plekhh2Q8C115 1491 aa21.06■□□□□ 0.96
Col17a1-201ENSMUST00000026045 Iqgap2Q3UQ44 1575 aa21.05■□□□□ 0.96
Col17a1-201ENSMUST00000026045 Cc2d2aQ8CFW7 1633 aa21.04■□□□□ 0.96
Col17a1-201ENSMUST00000026045 Tpm2P58774 284 aa21.04■□□□□ 0.96
Col17a1-201ENSMUST00000026045 TimelessQ9R1X4 1197 aa21.04■□□□□ 0.96
Col17a1-201ENSMUST00000026045 Zscan21Q07231 555 aa21.03■□□□□ 0.96
Col17a1-201ENSMUST00000026045 Nup155Q99P88 1391 aaKnown RBP21.03■□□□□ 0.96
Col17a1-201ENSMUST00000026045 Arid3cA6PWV5 409 aa21.03■□□□□ 0.96
Col17a1-201ENSMUST00000026045 KnstrnQ9D9Z1 312 aaKnown RBP21.03■□□□□ 0.96
Col17a1-201ENSMUST00000026045 SetQ9EQU5 289 aaKnown RBP21.02■□□□□ 0.96
Col17a1-201ENSMUST00000026045 Tmf1B9EKI3 1091 aa21.01■□□□□ 0.95
Col17a1-201ENSMUST00000026045 Speer4f1Q9D5Q6 258 aa21■□□□□ 0.95
Col17a1-201ENSMUST00000026045 Gtf2e1Q9D0D5 440 aa20.99■□□□□ 0.95
Col17a1-201ENSMUST00000026045 Pcmtd1P59913 357 aa20.99■□□□□ 0.95
Col17a1-201ENSMUST00000026045 NgefQ8CHT1 710 aa20.98■□□□□ 0.95
Col17a1-201ENSMUST00000026045 Usp47Q8BY87 1376 aa20.97■□□□□ 0.95
Col17a1-201ENSMUST00000026045 UacaQ8CGB3 1411 aa20.97■□□□□ 0.95
Col17a1-201ENSMUST00000026045 Stard8Q8K031 1019 aa20.96■□□□□ 0.95
Col17a1-201ENSMUST00000026045 Q8BT18 775 aa20.96■□□□□ 0.95
Col17a1-201ENSMUST00000026045 Dhx57Q6P5D3 1388 aaKnown RBP20.95■□□□□ 0.94
Col17a1-201ENSMUST00000026045 Dhx29Q6PGC1 1365 aaKnown RBP20.95■□□□□ 0.94
Col17a1-201ENSMUST00000026045 Znf692Q3U381 531 aa20.94■□□□□ 0.94
Col17a1-201ENSMUST00000026045 Smg6P61406 1418 aaKnown RBP20.94■□□□□ 0.94
Col17a1-201ENSMUST00000026045 Rock2P70336 1388 aa20.94■□□□□ 0.94
Col17a1-201ENSMUST00000026045 1700019A02RikA0A087WPV9 146 aa20.92■□□□□ 0.94
Col17a1-201ENSMUST00000026045 Top2aQ01320 1528 aaKnown RBP20.92■□□□□ 0.94
Col17a1-201ENSMUST00000026045 Stk26Q99JT2 416 aa20.92■□□□□ 0.94
Col17a1-201ENSMUST00000026045 DmtnQ9WV69 405 aa20.92■□□□□ 0.94
Col17a1-201ENSMUST00000026045 Pak3Q61036 559 aa20.91■□□□□ 0.94
Col17a1-201ENSMUST00000026045 Mfap1aC0HKD8 439 aaKnown RBP20.9■□□□□ 0.94
Col17a1-201ENSMUST00000026045 Mfap1bC0HKD9 439 aaKnown RBP20.9■□□□□ 0.94
Col17a1-201ENSMUST00000026045 Ecm2Q5FW85 670 aa20.9■□□□□ 0.94
Col17a1-201ENSMUST00000026045 Dcaf11Q91VU6 549 aa20.9■□□□□ 0.94
Col17a1-201ENSMUST00000026045 NudcO35685 332 aaKnown RBP20.89■□□□□ 0.93
Col17a1-201ENSMUST00000026045 Lemd3Q9WU40 921 aa20.89■□□□□ 0.93
Col17a1-201ENSMUST00000026045 Rbm10Q99KG3 930 aaKnown RBP20.88■□□□□ 0.93
Col17a1-201ENSMUST00000026045 Srcin1Q9QWI6 1250 aa20.88■□□□□ 0.93
Col17a1-201ENSMUST00000026045 Fam13bQ8K2H3 851 aa20.87■□□□□ 0.93
Col17a1-201ENSMUST00000026045 Sart1Q9Z315 806 aaKnown RBP20.86■□□□□ 0.93
Col17a1-201ENSMUST00000026045 CrbnQ8C7D2 445 aa20.86■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 8.5 ms