RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Map7d2A2AG50 781 aa21,4■■□□□ 1,02
Col17a1-201ENSMUST00000026045 Gm20521D3Z5F7 333 aa21,4■■□□□ 1,02
Col17a1-201ENSMUST00000026045 Podxl2Q8CAE9 603 aa21,4■■□□□ 1,02
Col17a1-201ENSMUST00000026045 ChgaP26339 463 aaKnown RBP21,39■■□□□ 1,02
Col17a1-201ENSMUST00000026045 Arhgap35Q91YM2 1499 aa21,38■■□□□ 1,01
Col17a1-201ENSMUST00000026045 CntlnA2AM05 1397 aa21,37■■□□□ 1,01
Col17a1-201ENSMUST00000026045 Neurod2Q62414 383 aa21,36■■□□□ 1,01
Col17a1-201ENSMUST00000026045 Casc1Q6TDU8 730 aa21,36■■□□□ 1,01
Col17a1-201ENSMUST00000026045 Rpap1Q80TE0 1409 aa21,36■■□□□ 1,01
Col17a1-201ENSMUST00000026045 Cabp1Q9JLK7 227 aa21,35■■□□□ 1,01
Col17a1-201ENSMUST00000026045 Cux2P70298 1426 aa21,35■■□□□ 1,01
Col17a1-201ENSMUST00000026045 Mphosph9A6H5Y1 991 aa21,34■■□□□ 1,01
Col17a1-201ENSMUST00000026045 Stk24Q99KH8 431 aa21,33■■□□□ 1
Col17a1-201ENSMUST00000026045 Rundc1Q0VDN7 615 aa21,32■■□□□ 1
Col17a1-201ENSMUST00000026045 IqubQ8CDK3 788 aa21,32■■□□□ 1
Col17a1-201ENSMUST00000026045 Smarca4Q3TKT4 1613 aaKnown RBP21,32■■□□□ 1
Col17a1-201ENSMUST00000026045 Map4P27546 1125 aaKnown RBP21,32■■□□□ 1
Col17a1-201ENSMUST00000026045 Chmp5Q9D7S9 219 aa21,31■■□□□ 1
Col17a1-201ENSMUST00000026045 Rrp9Q91WM3 475 aaKnown RBP21,3■■□□□ 1
Col17a1-201ENSMUST00000026045 Mbd3Q9Z2D8 285 aaKnown RBP21,3■■□□□ 1
Col17a1-201ENSMUST00000026045 Cttnbp2B9EJA2 1648 aa21,29■■□□□ 1
Col17a1-201ENSMUST00000026045 Fgd1P52734 960 aa21,29■■□□□ 1
Col17a1-201ENSMUST00000026045 SlkO54988 1233 aa21,28■■□□□ 1
Col17a1-201ENSMUST00000026045 Exoc6Q8R313 802 aa21,28■■□□□ 1
Col17a1-201ENSMUST00000026045 Safb2Q80YR5 991 aaKnown RBP21,27■■□□□ 1
Col17a1-201ENSMUST00000026045 Kiaa0754Q69ZZ9 979 aa21,27■■□□□ 1
Col17a1-201ENSMUST00000026045 Trak1Q6PD31 939 aa21,27■■□□□ 1
Col17a1-201ENSMUST00000026045 Becn1O88597 448 aa21,26■□□□□ 0,99
Col17a1-201ENSMUST00000026045 EspnQ9ET47 871 aa21,26■□□□□ 0,99
Col17a1-201ENSMUST00000026045 Calcoco2A2A6M5 331 aa21,26■□□□□ 0,99
Col17a1-201ENSMUST00000026045 Atad2bE9Q166 1460 aaKnown RBP21,25■□□□□ 0,99
Col17a1-201ENSMUST00000026045 Exosc9Q9JHI7 438 aaKnown RBP21,25■□□□□ 0,99
Col17a1-201ENSMUST00000026045 Carmil1Q6EDY6 1374 aa21,23■□□□□ 0,99
Col17a1-201ENSMUST00000026045 Map7O88735 730 aa21,22■□□□□ 0,99
Col17a1-201ENSMUST00000026045 Ush1cQ9ES64 910 aa21,21■□□□□ 0,99
Col17a1-201ENSMUST00000026045 Cnga1P29974 684 aa21,2■□□□□ 0,98
Col17a1-201ENSMUST00000026045 Gtf2a1Q99PM3 378 aa21,19■□□□□ 0,98
Col17a1-201ENSMUST00000026045 Stag3O70576 1240 aa21,18■□□□□ 0,98
Col17a1-201ENSMUST00000026045 Ipo8Q7TMY7 1010 aa21,18■□□□□ 0,98
Col17a1-201ENSMUST00000026045 Armcx1Q9CX83 456 aa21,18■□□□□ 0,98
Col17a1-201ENSMUST00000026045 Mre11Q61216 706 aa21,17■□□□□ 0,98
Col17a1-201ENSMUST00000026045 Ifit1bl1D3Z6F0 470 aa21,16■□□□□ 0,98
Col17a1-201ENSMUST00000026045 Gm973E9Q295 1059 aa21,15■□□□□ 0,98
Col17a1-201ENSMUST00000026045 Gtf3c5Q8R2T8 520 aa21,14■□□□□ 0,98
Col17a1-201ENSMUST00000026045 Phldb1Q6PDH0 1371 aaKnown RBP21,14■□□□□ 0,98
Col17a1-201ENSMUST00000026045 Ccnb3Q810T2 1396 aa21,14■□□□□ 0,97
Col17a1-201ENSMUST00000026045 Mak16Q8BGS0 296 aaKnown RBP21,13■□□□□ 0,97
Col17a1-201ENSMUST00000026045 AknaQ80VW7 1404 aa21,13■□□□□ 0,97
Col17a1-201ENSMUST00000026045 Fam43aQ8BUP8 424 aa21,13■□□□□ 0,97
Col17a1-201ENSMUST00000026045 Mapk8ip3Q9ESN9 1337 aa21,12■□□□□ 0,97
Col17a1-201ENSMUST00000026045 Trim30aP15533 496 aa21,12■□□□□ 0,97
Col17a1-201ENSMUST00000026045 Irx6Q9ER75 438 aa21,11■□□□□ 0,97
Col17a1-201ENSMUST00000026045 Rwdd1Q9CQK7 243 aa21,1■□□□□ 0,97
Col17a1-201ENSMUST00000026045 Gm6268A2A3U9 297 aa21,07■□□□□ 0,96
Col17a1-201ENSMUST00000026045 LrpprcQ6PB66 1392 aaKnown RBP21,07■□□□□ 0,96
Col17a1-201ENSMUST00000026045 PtmsQ9D0J8 101 aaKnown RBP21,07■□□□□ 0,96
Col17a1-201ENSMUST00000026045 Sart3Q9JLI8 962 aaKnown RBP21,07■□□□□ 0,96
Col17a1-201ENSMUST00000026045 Fhad1A6PWD2 1420 aa21,06■□□□□ 0,96
Col17a1-201ENSMUST00000026045 Gpatch11Q3UFS4 262 aa21,06■□□□□ 0,96
Col17a1-201ENSMUST00000026045 RdxP26043 583 aaKnown RBP21,06■□□□□ 0,96
Col17a1-201ENSMUST00000026045 Plekhh2Q8C115 1491 aa21,06■□□□□ 0,96
Col17a1-201ENSMUST00000026045 Iqgap2Q3UQ44 1575 aa21,05■□□□□ 0,96
Col17a1-201ENSMUST00000026045 Cc2d2aQ8CFW7 1633 aa21,04■□□□□ 0,96
Col17a1-201ENSMUST00000026045 Tpm2P58774 284 aa21,04■□□□□ 0,96
Col17a1-201ENSMUST00000026045 TimelessQ9R1X4 1197 aa21,04■□□□□ 0,96
Col17a1-201ENSMUST00000026045 Zscan21Q07231 555 aa21,03■□□□□ 0,96
Col17a1-201ENSMUST00000026045 Nup155Q99P88 1391 aaKnown RBP21,03■□□□□ 0,96
Col17a1-201ENSMUST00000026045 Arid3cA6PWV5 409 aa21,03■□□□□ 0,96
Col17a1-201ENSMUST00000026045 KnstrnQ9D9Z1 312 aaKnown RBP21,03■□□□□ 0,96
Col17a1-201ENSMUST00000026045 SetQ9EQU5 289 aaKnown RBP21,02■□□□□ 0,96
Col17a1-201ENSMUST00000026045 Tmf1B9EKI3 1091 aa21,01■□□□□ 0,95
Col17a1-201ENSMUST00000026045 Speer4f1Q9D5Q6 258 aa21■□□□□ 0,95
Col17a1-201ENSMUST00000026045 Gtf2e1Q9D0D5 440 aa20,99■□□□□ 0,95
Col17a1-201ENSMUST00000026045 Pcmtd1P59913 357 aa20,99■□□□□ 0,95
Col17a1-201ENSMUST00000026045 NgefQ8CHT1 710 aa20,98■□□□□ 0,95
Col17a1-201ENSMUST00000026045 Usp47Q8BY87 1376 aa20,97■□□□□ 0,95
Col17a1-201ENSMUST00000026045 UacaQ8CGB3 1411 aa20,97■□□□□ 0,95
Col17a1-201ENSMUST00000026045 Stard8Q8K031 1019 aa20,96■□□□□ 0,95
Col17a1-201ENSMUST00000026045 Q8BT18 775 aa20,96■□□□□ 0,95
Col17a1-201ENSMUST00000026045 Dhx57Q6P5D3 1388 aaKnown RBP20,95■□□□□ 0,94
Col17a1-201ENSMUST00000026045 Dhx29Q6PGC1 1365 aaKnown RBP20,95■□□□□ 0,94
Col17a1-201ENSMUST00000026045 Znf692Q3U381 531 aa20,94■□□□□ 0,94
Col17a1-201ENSMUST00000026045 Smg6P61406 1418 aaKnown RBP20,94■□□□□ 0,94
Col17a1-201ENSMUST00000026045 Rock2P70336 1388 aa20,94■□□□□ 0,94
Col17a1-201ENSMUST00000026045 1700019A02RikA0A087WPV9 146 aa20,92■□□□□ 0,94
Col17a1-201ENSMUST00000026045 Top2aQ01320 1528 aaKnown RBP20,92■□□□□ 0,94
Col17a1-201ENSMUST00000026045 Stk26Q99JT2 416 aa20,92■□□□□ 0,94
Col17a1-201ENSMUST00000026045 DmtnQ9WV69 405 aa20,92■□□□□ 0,94
Col17a1-201ENSMUST00000026045 Pak3Q61036 559 aa20,91■□□□□ 0,94
Col17a1-201ENSMUST00000026045 Mfap1aC0HKD8 439 aaKnown RBP20,9■□□□□ 0,94
Col17a1-201ENSMUST00000026045 Mfap1bC0HKD9 439 aaKnown RBP20,9■□□□□ 0,94
Col17a1-201ENSMUST00000026045 Ecm2Q5FW85 670 aa20,9■□□□□ 0,94
Col17a1-201ENSMUST00000026045 Dcaf11Q91VU6 549 aa20,9■□□□□ 0,94
Col17a1-201ENSMUST00000026045 NudcO35685 332 aaKnown RBP20,89■□□□□ 0,93
Col17a1-201ENSMUST00000026045 Lemd3Q9WU40 921 aa20,89■□□□□ 0,93
Col17a1-201ENSMUST00000026045 Rbm10Q99KG3 930 aaKnown RBP20,88■□□□□ 0,93
Col17a1-201ENSMUST00000026045 Srcin1Q9QWI6 1250 aa20,88■□□□□ 0,93
Col17a1-201ENSMUST00000026045 Fam13bQ8K2H3 851 aa20,87■□□□□ 0,93
Col17a1-201ENSMUST00000026045 Sart1Q9Z315 806 aaKnown RBP20,86■□□□□ 0,93
Col17a1-201ENSMUST00000026045 CrbnQ8C7D2 445 aa20,86■□□□□ 0,93
Retrieved 100 of 22,080 RNA–protein pairs in 32,1 ms