RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Ipo8Q7TMY7 1010 aa19.31■□□□□ 0.68
Col2a1-201ENSMUST00000023123 Fhad1A6PWD2 1420 aa19.31■□□□□ 0.68
Col2a1-201ENSMUST00000023123 Stag3O70576 1240 aa19.31■□□□□ 0.68
Col2a1-201ENSMUST00000023123 Pes1Q9EQ61 584 aaKnown RBP19.29■□□□□ 0.68
Col2a1-201ENSMUST00000023123 MsnP26041 577 aaKnown RBP19.29■□□□□ 0.68
Col2a1-201ENSMUST00000023123 Rrp12Q6P5B0 1295 aaKnown RBP19.26■□□□□ 0.67
Col2a1-201ENSMUST00000023123 Ccdc88bQ4QRL3 1481 aa19.25■□□□□ 0.67
Col2a1-201ENSMUST00000023123 Gm973E9Q295 1059 aa19.25■□□□□ 0.67
Col2a1-201ENSMUST00000023123 1700019A02RikA0A087WPV9 146 aa19.25■□□□□ 0.67
Col2a1-201ENSMUST00000023123 Stk24Q99KH8 431 aa19.25■□□□□ 0.67
Col2a1-201ENSMUST00000023123 Tmf1B9EKI3 1091 aa19.23■□□□□ 0.67
Col2a1-201ENSMUST00000023123 Nolc1E9Q5C9 702 aaKnown RBP19.23■□□□□ 0.67
Col2a1-201ENSMUST00000023123 Znf326O88291 580 aa19.23■□□□□ 0.67
Col2a1-201ENSMUST00000023123 Map4P27546 1125 aaKnown RBP19.23■□□□□ 0.67
Col2a1-201ENSMUST00000023123 Baz1bQ9Z277 1479 aa19.22■□□□□ 0.67
Col2a1-201ENSMUST00000023123 4933402E13RikQ9D4D2 429 aa19.21■□□□□ 0.67
Col2a1-201ENSMUST00000023123 Cnga1P29974 684 aa19.21■□□□□ 0.67
Col2a1-201ENSMUST00000023123 Gtf3c3Q3TMP1 882 aa19.2■□□□□ 0.66
Col2a1-201ENSMUST00000023123 Fyco1Q8VDC1 1437 aa19.2■□□□□ 0.66
Col2a1-201ENSMUST00000023123 Calcoco2A2A6M5 331 aa19.2■□□□□ 0.66
Col2a1-201ENSMUST00000023123 Crybg2B7ZCC2 1516 aa19.19■□□□□ 0.66
Col2a1-201ENSMUST00000023123 Mphosph9A6H5Y1 991 aa19.19■□□□□ 0.66
Col2a1-201ENSMUST00000023123 CntlnA2AM05 1397 aa19.17■□□□□ 0.66
Col2a1-201ENSMUST00000023123 Ddrgk1Q80WW9 315 aa19.17■□□□□ 0.66
Col2a1-201ENSMUST00000023123 Kif27Q7M6Z4 1394 aa19.17■□□□□ 0.66
Col2a1-201ENSMUST00000023123 Cecr2E9Q2Z1 1453 aa19.17■□□□□ 0.66
Col2a1-201ENSMUST00000023123 Pcmtd1P59913 357 aa19.15■□□□□ 0.66
Col2a1-201ENSMUST00000023123 Golga2Q921M4 999 aa19.15■□□□□ 0.66
Col2a1-201ENSMUST00000023123 Znf316Q6PGE4 1016 aa19.15■□□□□ 0.66
Col2a1-201ENSMUST00000023123 Arhgap35Q91YM2 1499 aa19.15■□□□□ 0.66
Col2a1-201ENSMUST00000023123 Mfap1aC0HKD8 439 aaKnown RBP19.14■□□□□ 0.66
Col2a1-201ENSMUST00000023123 Mfap1bC0HKD9 439 aaKnown RBP19.14■□□□□ 0.66
Col2a1-201ENSMUST00000023123 Sart3Q9JLI8 962 aaKnown RBP19.14■□□□□ 0.65
Col2a1-201ENSMUST00000023123 Fmn1Q05860 1466 aa19.13■□□□□ 0.65
Col2a1-201ENSMUST00000023123 Pde3bQ61409 1100 aa19.13■□□□□ 0.65
Col2a1-201ENSMUST00000023123 Gtf2e1Q9D0D5 440 aa19.13■□□□□ 0.65
Col2a1-201ENSMUST00000023123 ChgaP26339 463 aaKnown RBP19.12■□□□□ 0.65
Col2a1-201ENSMUST00000023123 Aebp1Q640N1 1128 aa19.12■□□□□ 0.65
Col2a1-201ENSMUST00000023123 Cluap1Q8R3P7 413 aa19.12■□□□□ 0.65
Col2a1-201ENSMUST00000023123 Ifit1bl1D3Z6F0 470 aa19.11■□□□□ 0.65
Col2a1-201ENSMUST00000023123 Trak1Q6PD31 939 aa19.11■□□□□ 0.65
Col2a1-201ENSMUST00000023123 U2af1Q9D883 239 aaKnown RBP19.1■□□□□ 0.65
Col2a1-201ENSMUST00000023123 Sh3bp5Q9Z131 463 aa19.1■□□□□ 0.65
Col2a1-201ENSMUST00000023123 CftrP26361 1476 aa19.09■□□□□ 0.65
Col2a1-201ENSMUST00000023123 Tmco5bQ80X59 307 aa19.09■□□□□ 0.65
Col2a1-201ENSMUST00000023123 Smg6P61406 1418 aaKnown RBP19.08■□□□□ 0.64
Col2a1-201ENSMUST00000023123 Cabp1Q9JLK7 227 aa19.08■□□□□ 0.64
Col2a1-201ENSMUST00000023123 RdxP26043 583 aaKnown RBP19.07■□□□□ 0.64
Col2a1-201ENSMUST00000023123 SlkO54988 1233 aa19.06■□□□□ 0.64
Col2a1-201ENSMUST00000023123 U2surpQ6NV83 1029 aaKnown RBP19.06■□□□□ 0.64
Col2a1-201ENSMUST00000023123 VgfQ0VGU4 617 aa19.06■□□□□ 0.64
Col2a1-201ENSMUST00000023123 Rtn4Q99P72 1162 aaKnown RBP19.05■□□□□ 0.64
Col2a1-201ENSMUST00000023123 NgefQ8CHT1 710 aa19.05■□□□□ 0.64
Col2a1-201ENSMUST00000023123 Rtf1A2AQ19 715 aaKnown RBP19.04■□□□□ 0.64
Col2a1-201ENSMUST00000023123 Dcaf11Q91VU6 549 aa19.04■□□□□ 0.64
Col2a1-201ENSMUST00000023123 Becn1O88597 448 aa19.04■□□□□ 0.64
Col2a1-201ENSMUST00000023123 CrbnQ8C7D2 445 aa19.04■□□□□ 0.64
Col2a1-201ENSMUST00000023123 Mre11Q61216 706 aa19.03■□□□□ 0.64
Col2a1-201ENSMUST00000023123 Rock2P70336 1388 aa19.02■□□□□ 0.64
Col2a1-201ENSMUST00000023123 Smarca2Q6DIC0 1577 aa19.02■□□□□ 0.64
Col2a1-201ENSMUST00000023123 Rassf8Q8CJ96 419 aa19.02■□□□□ 0.63
Col2a1-201ENSMUST00000023123 Kiaa0754Q69ZZ9 979 aa19.01■□□□□ 0.63
Col2a1-201ENSMUST00000023123 GorabQ8BRM2 368 aa19.01■□□□□ 0.63
Col2a1-201ENSMUST00000023123 Smarce1O54941 411 aaKnown RBP19.01■□□□□ 0.63
Col2a1-201ENSMUST00000023123 CgnP59242 1191 aa19.01■□□□□ 0.63
Col2a1-201ENSMUST00000023123 Iffo2Q8R2V2 512 aa19.01■□□□□ 0.63
Col2a1-201ENSMUST00000023123 Taok2Q6ZQ29 1240 aa19■□□□□ 0.63
Col2a1-201ENSMUST00000023123 Ccar1Q8CH18 1146 aaKnown RBP19■□□□□ 0.63
Col2a1-201ENSMUST00000023123 Atp6v1dP57746 247 aa18.99■□□□□ 0.63
Col2a1-201ENSMUST00000023123 R3hcc1Q8BSI6 488 aa18.99■□□□□ 0.63
Col2a1-201ENSMUST00000023123 Anapc15P60007 132 aa18.99■□□□□ 0.63
Col2a1-201ENSMUST00000023123 Rsph3aQ3UFY4 516 aa18.98■□□□□ 0.63
Col2a1-201ENSMUST00000023123 Znf330Q922H9 316 aa18.98■□□□□ 0.63
Col2a1-201ENSMUST00000023123 Ksr2Q3UVC0 959 aa18.98■□□□□ 0.63
Col2a1-201ENSMUST00000023123 Srcin1Q9QWI6 1250 aa18.98■□□□□ 0.63
Col2a1-201ENSMUST00000023123 Cald1E9QA15 768 aaKnown RBP18.97■□□□□ 0.63
Col2a1-201ENSMUST00000023123 Atad2bE9Q166 1460 aaKnown RBP18.97■□□□□ 0.63
Col2a1-201ENSMUST00000023123 Ush1cQ9ES64 910 aa18.97■□□□□ 0.63
Col2a1-201ENSMUST00000023123 Cspp1B2RX88 1205 aa18.96■□□□□ 0.63
Col2a1-201ENSMUST00000023123 Trim30aP15533 496 aa18.95■□□□□ 0.62
Col2a1-201ENSMUST00000023123 Clstn1Q9EPL2 979 aa18.94■□□□□ 0.62
Col2a1-201ENSMUST00000023123 Ylpm1Q9R0I7 1386 aaKnown RBP18.94■□□□□ 0.62
Col2a1-201ENSMUST00000023123 MecomP14404 1042 aa18.93■□□□□ 0.62
Col2a1-201ENSMUST00000023123 Synj1Q8CHC4 1574 aa18.92■□□□□ 0.62
Col2a1-201ENSMUST00000023123 Cgnl1Q6AW69 1298 aa18.92■□□□□ 0.62
Col2a1-201ENSMUST00000023123 Q3TQI7 289 aaKnown RBP18.91■□□□□ 0.62
Col2a1-201ENSMUST00000023123 Cux2P70298 1426 aa18.91■□□□□ 0.62
Col2a1-201ENSMUST00000023123 Slc4a1apE9PX68 744 aa18.91■□□□□ 0.62
Col2a1-201ENSMUST00000023123 Nup155Q99P88 1391 aaKnown RBP18.89■□□□□ 0.61
Col2a1-201ENSMUST00000023123 Glipr1l2Q9CQ35 332 aa18.89■□□□□ 0.61
Col2a1-201ENSMUST00000023123 Map7d2A2AG50 781 aa18.88■□□□□ 0.61
Col2a1-201ENSMUST00000023123 Plin1Q8CGN5 517 aa18.88■□□□□ 0.61
Col2a1-201ENSMUST00000023123 Stard8Q8K031 1019 aa18.88■□□□□ 0.61
Col2a1-201ENSMUST00000023123 Phldb1Q6PDH0 1371 aaKnown RBP18.88■□□□□ 0.61
Col2a1-201ENSMUST00000023123 Tpm3-rs7D3Z2H9 248 aa18.88■□□□□ 0.61
Col2a1-201ENSMUST00000023123 Gpatch11Q3UFS4 262 aa18.88■□□□□ 0.61
Col2a1-201ENSMUST00000023123 Stk26Q99JT2 416 aa18.88■□□□□ 0.61
Col2a1-201ENSMUST00000023123 Birc3O08863 600 aa18.86■□□□□ 0.61
Col2a1-201ENSMUST00000023123 Spag9Q58A65 1321 aaKnown RBP18.85■□□□□ 0.61
Col2a1-201ENSMUST00000023123 Smarca4Q3TKT4 1613 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 10 ms