RNA–Protein interactions for RNA: ENSMUST00000022330.8

Ldb3-203, Transcript of LIM domain-binding protein 3, mousemouse

TSL 1 (best) BASIC

Gene Ldb3, Length 1,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-203ENSMUST00000022330 Gapvd1Q6PAR5 1458 aa18.14■□□□□ 0.5
Ldb3-203ENSMUST00000022330 Ythdc2B2RR83 1445 aaKnown RBP18.14■□□□□ 0.5
Ldb3-203ENSMUST00000022330 Caskin1Q6P9K8 1431 aa18.14■□□□□ 0.5
Ldb3-203ENSMUST00000022330 Kdm6bQ5NCY0 1641 aa18.13■□□□□ 0.49
Ldb3-203ENSMUST00000022330 Plekhh2Q8C115 1491 aa18.13■□□□□ 0.49
Ldb3-203ENSMUST00000022330 Cep170Q6A065 1588 aa18.13■□□□□ 0.49
Ldb3-203ENSMUST00000022330 Rfx7F8VPJ6 1459 aa18.12■□□□□ 0.49
Ldb3-203ENSMUST00000022330 Abcc5Q9R1X5 1436 aa18.11■□□□□ 0.49
Ldb3-203ENSMUST00000022330 Rnf17Q99MV7 1640 aa18.1■□□□□ 0.49
Ldb3-203ENSMUST00000022330 Abca8bQ8K440 1620 aa18.09■□□□□ 0.49
Ldb3-203ENSMUST00000022330 PtprtQ99M80 1454 aa18.09■□□□□ 0.49
Ldb3-203ENSMUST00000022330 Igf1rQ60751 1373 aa18.08■□□□□ 0.49
Ldb3-203ENSMUST00000022330 Cdk11bP24788 784 aaKnown RBP18.08■□□□□ 0.48
Ldb3-203ENSMUST00000022330 Mtus2Q3UHD3 1353 aa18.06■□□□□ 0.48
Ldb3-203ENSMUST00000022330 AI481877A2ALV5 1481 aa18.05■□□□□ 0.48
Ldb3-203ENSMUST00000022330 Ccer2J3QPU5 274 aa18.04■□□□□ 0.48
Ldb3-203ENSMUST00000022330 Atp10dQ8K2X1 1416 aa18.04■□□□□ 0.48
Ldb3-203ENSMUST00000022330 Chic2Q9D9G3 165 aa18.03■□□□□ 0.48
Ldb3-203ENSMUST00000022330 Gm32742A0A1B0GT42 1604 aa18.03■□□□□ 0.48
Ldb3-203ENSMUST00000022330 Il16O54824 1322 aa18.03■□□□□ 0.48
Ldb3-203ENSMUST00000022330 Fhod3Q76LL6 1578 aa18.02■□□□□ 0.48
Ldb3-203ENSMUST00000022330 Dennd4bQ3U1Y4 1499 aa18.02■□□□□ 0.48
Ldb3-203ENSMUST00000022330 Arhgap5P97393 1501 aa18.02■□□□□ 0.47
Ldb3-203ENSMUST00000022330 Tdrd9Q14BI7 1383 aa18.02■□□□□ 0.47
Ldb3-203ENSMUST00000022330 Kdm3bQ6ZPY7 1562 aa18.02■□□□□ 0.47
Ldb3-203ENSMUST00000022330 Col17a1Q07563 1470 aa18.01■□□□□ 0.47
Ldb3-203ENSMUST00000022330 Cfap74Q3UY96 1578 aa18.01■□□□□ 0.47
Ldb3-203ENSMUST00000022330 Lrrc9Q8CDN9 1456 aa18■□□□□ 0.47
Ldb3-203ENSMUST00000022330 Pdcd11Q6NS46 1862 aaKnown RBP18■□□□□ 0.47
Ldb3-203ENSMUST00000022330 Cabp1Q9JLK7 227 aa18■□□□□ 0.47
Ldb3-203ENSMUST00000022330 SphkapQ6NSW3 1687 aa17.99■□□□□ 0.47
Ldb3-203ENSMUST00000022330 Ankrd36D3Z4K0 1415 aa17.98■□□□□ 0.47
Ldb3-203ENSMUST00000022330 Znf608Q56A10 1511 aa17.97■□□□□ 0.47
Ldb3-203ENSMUST00000022330 Fmn2Q9JL04 1578 aa17.96■□□□□ 0.47
Ldb3-203ENSMUST00000022330 Hecw1Q8K4P8 1604 aa17.95■□□□□ 0.46
Ldb3-203ENSMUST00000022330 Adgrl3Q80TS3 1537 aa17.95■□□□□ 0.46
Ldb3-203ENSMUST00000022330 NclP09405 707 aaKnown RBP17.95■□□□□ 0.46
Ldb3-203ENSMUST00000022330 TonslQ6NZL6 1363 aa17.93■□□□□ 0.46
Ldb3-203ENSMUST00000022330 Mast1Q9R1L5 1570 aa17.92■□□□□ 0.46
Ldb3-203ENSMUST00000022330 Ak9G3UYQ4 1894 aa17.92■□□□□ 0.46
Ldb3-203ENSMUST00000022330 Adgrb2Q8CGM1 1561 aa17.92■□□□□ 0.46
Ldb3-203ENSMUST00000022330 Abcc3B2RX12 1523 aa17.92■□□□□ 0.46
Ldb3-203ENSMUST00000022330 Neurl4Q5NCX5 1563 aa17.91■□□□□ 0.46
Ldb3-203ENSMUST00000022330 Las1lA2BE28 776 aaKnown RBP17.89■□□□□ 0.45
Ldb3-203ENSMUST00000022330 Gm156Q58A37 223 aa17.89■□□□□ 0.45
Ldb3-203ENSMUST00000022330 Trappc8E9PWG2 1437 aa17.88■□□□□ 0.45
Ldb3-203ENSMUST00000022330 Dnajc5P60904 198 aa17.88■□□□□ 0.45
Ldb3-203ENSMUST00000022330 Adgrl2Q8JZZ7 1487 aa17.88■□□□□ 0.45
Ldb3-203ENSMUST00000022330 Setbp1Q9Z180 1582 aa17.88■□□□□ 0.45
Ldb3-203ENSMUST00000022330 Zfyve16Q80U44 1528 aa17.87■□□□□ 0.45
Ldb3-203ENSMUST00000022330 Ube2uB1AUC4 352 aa17.86■□□□□ 0.45
Ldb3-203ENSMUST00000022330 Eid3Q3V124 375 aa17.86■□□□□ 0.45
Ldb3-203ENSMUST00000022330 Ifnlr1Q8CGK5 535 aa17.86■□□□□ 0.45
Ldb3-203ENSMUST00000022330 Lamc1P02468 1607 aaKnown RBP17.85■□□□□ 0.45
Ldb3-203ENSMUST00000022330 AlkP97793 1621 aa17.85■□□□□ 0.45
Ldb3-203ENSMUST00000022330 Kidins220E9Q9B7 1793 aa17.85■□□□□ 0.45
Ldb3-203ENSMUST00000022330 Kif21bQ9QXL1 1668 aa17.84■□□□□ 0.45
Ldb3-203ENSMUST00000022330 Cdc42bpbQ7TT50 1713 aa17.82■□□□□ 0.44
Ldb3-203ENSMUST00000022330 Abca9Q8K449 1623 aa17.82■□□□□ 0.44
Ldb3-203ENSMUST00000022330 Pprc1Q6NZN1 1644 aa17.8■□□□□ 0.44
Ldb3-203ENSMUST00000022330 Trpm2Q91YD4 1506 aa17.79■□□□□ 0.44
Ldb3-203ENSMUST00000022330 Sart1Q9Z315 806 aaKnown RBP17.79■□□□□ 0.44
Ldb3-203ENSMUST00000022330 Arid3cA6PWV5 409 aa17.79■□□□□ 0.44
Ldb3-203ENSMUST00000022330 Mphosph9A6H5Y1 991 aa17.78■□□□□ 0.44
Ldb3-203ENSMUST00000022330 Zfp644E9QA22 1323 aa17.75■□□□□ 0.43
Ldb3-203ENSMUST00000022330 Clasp1Q80TV8 1535 aaKnown RBP17.73■□□□□ 0.43
Ldb3-203ENSMUST00000022330 Supt6hQ62383 1726 aaKnown RBP17.72■□□□□ 0.43
Ldb3-203ENSMUST00000022330 Prdm16A2A935 1275 aa17.72■□□□□ 0.43
Ldb3-203ENSMUST00000022330 Ssh2Q5SW75 1423 aa17.72■□□□□ 0.43
Ldb3-203ENSMUST00000022330 Nup155Q99P88 1391 aaKnown RBP17.71■□□□□ 0.43
Ldb3-203ENSMUST00000022330 Rrp7aQ9D1C9 280 aaKnown RBP17.7■□□□□ 0.42
Ldb3-203ENSMUST00000022330 Abca17E9PX95 1733 aa17.7■□□□□ 0.42
Ldb3-203ENSMUST00000022330 AglF8VPN4 1532 aa17.69■□□□□ 0.42
Ldb3-203ENSMUST00000022330 Hspa5P20029 655 aaKnown RBP17.67■□□□□ 0.42
Ldb3-203ENSMUST00000022330 Xrn1P97789 1719 aaKnown RBP17.67■□□□□ 0.42
Ldb3-203ENSMUST00000022330 Clstn2Q9ER65 966 aa17.66■□□□□ 0.42
Ldb3-203ENSMUST00000022330 Ttc37F8VPK0 1563 aa17.65■□□□□ 0.42
Ldb3-203ENSMUST00000022330 Ttll5Q8CHB8 1328 aa17.65■□□□□ 0.42
Ldb3-203ENSMUST00000022330 Kdm5cP41230 1554 aa17.65■□□□□ 0.42
Ldb3-203ENSMUST00000022330 Lemd3Q9WU40 921 aa17.65■□□□□ 0.42
Ldb3-203ENSMUST00000022330 OvosQ3UU35 1456 aa17.64■□□□□ 0.41
Ldb3-203ENSMUST00000022330 Pkd2O35245 966 aa17.64■□□□□ 0.41
Ldb3-203ENSMUST00000022330 Depdc5P61460 1591 aa17.63■□□□□ 0.41
Ldb3-203ENSMUST00000022330 Rprd2Q6NXI6 1469 aaKnown RBP17.63■□□□□ 0.41
Ldb3-203ENSMUST00000022330 Kiaa0556Q8C753 1610 aa17.63■□□□□ 0.41
Ldb3-203ENSMUST00000022330 Map4P27546 1125 aaKnown RBP17.63■□□□□ 0.41
Ldb3-203ENSMUST00000022330 Pik3c2gO70167 1506 aa17.63■□□□□ 0.41
Ldb3-203ENSMUST00000022330 Naip5Q9R016 1403 aa17.63■□□□□ 0.41
Ldb3-203ENSMUST00000022330 Map3k5O35099 1380 aa17.63■□□□□ 0.41
Ldb3-203ENSMUST00000022330 Nos1Q9Z0J4 1429 aa17.62■□□□□ 0.41
Ldb3-203ENSMUST00000022330 Camsap2Q8C1B1 1461 aa17.61■□□□□ 0.41
Ldb3-203ENSMUST00000022330 Spag9Q58A65 1321 aaKnown RBP17.61■□□□□ 0.41
Ldb3-203ENSMUST00000022330 Ttbk1Q6PCN3 1308 aa17.61■□□□□ 0.41
Ldb3-203ENSMUST00000022330 Asxl1P59598 1514 aa17.61■□□□□ 0.41
Ldb3-203ENSMUST00000022330 Usp54Q8BL06 1588 aaKnown RBP17.61■□□□□ 0.41
Ldb3-203ENSMUST00000022330 PtprgQ05909 1442 aa17.61■□□□□ 0.41
Ldb3-203ENSMUST00000022330 Atp10aO54827 1508 aa17.6■□□□□ 0.41
Ldb3-203ENSMUST00000022330 Kif1bQ60575 1816 aaKnown RBP17.58■□□□□ 0.41
Ldb3-203ENSMUST00000022330 AdgbG3UZ78 1657 aa17.58■□□□□ 0.4
Ldb3-203ENSMUST00000022330 ShprhQ7TPQ3 1674 aa17.58■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 65.6 ms