RNA–Protein interactions for RNA: ENSMUST00000004097.15

Cux1-201, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Cux1, Length 12,862 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-201ENSMUST00000004097 Kif7B7ZNG0 1348 aa10.53□□□□□ -0.72
Cux1-201ENSMUST00000004097 Pibf1E9Q6K3 756 aa10.53□□□□□ -0.72
Cux1-201ENSMUST00000004097 Hdgfl1Q2VPR5 283 aa10.52□□□□□ -0.73
Cux1-201ENSMUST00000004097 Q3TQI7 289 aaKnown RBP10.51□□□□□ -0.73
Cux1-201ENSMUST00000004097 Dhx16G3X8X0 1044 aaKnown RBP10.51□□□□□ -0.73
Cux1-201ENSMUST00000004097 Znf704Q9ERQ3 566 aa10.51□□□□□ -0.73
Cux1-201ENSMUST00000004097 Kri1Q8VDQ9 704 aaKnown RBP10.51□□□□□ -0.73
Cux1-201ENSMUST00000004097 Fnbp4Q6ZQ03 1031 aa10.5□□□□□ -0.73
Cux1-201ENSMUST00000004097 Sytl4Q9R0Q1 673 aa10.5□□□□□ -0.73
Cux1-201ENSMUST00000004097 MecomP14404 1042 aa10.49□□□□□ -0.73
Cux1-201ENSMUST00000004097 Casc1Q6TDU8 730 aa10.49□□□□□ -0.73
Cux1-201ENSMUST00000004097 Iffo2Q8R2V2 512 aa10.48□□□□□ -0.73
Cux1-201ENSMUST00000004097 Card11Q8CIS0 1159 aa10.47□□□□□ -0.73
Cux1-201ENSMUST00000004097 Calr4Q3TQS0 420 aa10.47□□□□□ -0.73
Cux1-201ENSMUST00000004097 CanxP35564 591 aaKnown RBP10.46□□□□□ -0.74
Cux1-201ENSMUST00000004097 Wwc2Q6NXJ0 1187 aa10.46□□□□□ -0.74
Cux1-201ENSMUST00000004097 Eva1cP58659 440 aa10.46□□□□□ -0.74
Cux1-201ENSMUST00000004097 Cyb5rlB1AS42 316 aa10.45□□□□□ -0.74
Cux1-201ENSMUST00000004097 Ap3b2Q9JME5 1082 aa10.45□□□□□ -0.74
Cux1-201ENSMUST00000004097 CrebrfQ8CDG5 640 aaKnown RBP10.45□□□□□ -0.74
Cux1-201ENSMUST00000004097 Brpf1B2RRD7 1212 aa10.44□□□□□ -0.74
Cux1-201ENSMUST00000004097 Dmrt2Q8BG36 561 aa10.44□□□□□ -0.74
Cux1-201ENSMUST00000004097 Tpm3-rs7D3Z2H9 248 aa10.43□□□□□ -0.74
Cux1-201ENSMUST00000004097 CgnP59242 1191 aa10.43□□□□□ -0.74
Cux1-201ENSMUST00000004097 Tmco5bQ80X59 307 aa10.43□□□□□ -0.74
Cux1-201ENSMUST00000004097 AppP12023 770 aa10.42□□□□□ -0.74
Cux1-201ENSMUST00000004097 1700123L14RikQ3V2K7 440 aa10.42□□□□□ -0.74
Cux1-201ENSMUST00000004097 Krt82Q99M74 516 aa10.42□□□□□ -0.74
Cux1-201ENSMUST00000004097 Tcerg1Q8CGF7 1100 aaKnown RBP10.41□□□□□ -0.74
Cux1-201ENSMUST00000004097 Znf330Q922H9 316 aa10.41□□□□□ -0.74
Cux1-201ENSMUST00000004097 Rbm5Q91YE7 815 aaKnown RBP10.41□□□□□ -0.74
Cux1-201ENSMUST00000004097 MccE9PWI3 1003 aa10.41□□□□□ -0.74
Cux1-201ENSMUST00000004097 Ccdc43Q9CR29 222 aaKnown RBP10.4□□□□□ -0.74
Cux1-201ENSMUST00000004097 NudcO35685 332 aaKnown RBP10.4□□□□□ -0.75
Cux1-201ENSMUST00000004097 Ercc6F8VPZ5 1481 aa10.39□□□□□ -0.75
Cux1-201ENSMUST00000004097 Odf2A3KGV1 830 aaKnown RBP10.39□□□□□ -0.75
Cux1-201ENSMUST00000004097 Kif15Q6P9L6 1387 aa10.39□□□□□ -0.75
Cux1-201ENSMUST00000004097 BcanQ61361 883 aa10.39□□□□□ -0.75
Cux1-201ENSMUST00000004097 Zfp777B9EKF4 885 aa10.39□□□□□ -0.75
Cux1-201ENSMUST00000004097 Ddx54Q8K4L0 874 aaKnown RBP10.38□□□□□ -0.75
Cux1-201ENSMUST00000004097 Ccer2J3QPU5 274 aa10.38□□□□□ -0.75
Cux1-201ENSMUST00000004097 Ofd1Q80Z25 1017 aa10.38□□□□□ -0.75
Cux1-201ENSMUST00000004097 Egfem1Q8C088 590 aa10.38□□□□□ -0.75
Cux1-201ENSMUST00000004097 Spag9Q58A65 1321 aaKnown RBP10.38□□□□□ -0.75
Cux1-201ENSMUST00000004097 Skida1Q80YR3 822 aa10.38□□□□□ -0.75
Cux1-201ENSMUST00000004097 Wdr78E9PYY5 807 aa10.37□□□□□ -0.75
Cux1-201ENSMUST00000004097 Cdca7Q9D0M2 382 aa10.36□□□□□ -0.75
Cux1-201ENSMUST00000004097 Cnksr2Q80YA9 1032 aa10.36□□□□□ -0.75
Cux1-201ENSMUST00000004097 Tpd52l1O54818 204 aa10.36□□□□□ -0.75
Cux1-201ENSMUST00000004097 B4galnt3Q6L8S8 986 aa10.36□□□□□ -0.75
Cux1-201ENSMUST00000004097 Map7O88735 730 aa10.35□□□□□ -0.75
Cux1-201ENSMUST00000004097 Znf697Q569E7 569 aa10.35□□□□□ -0.75
Cux1-201ENSMUST00000004097 Sirt1Q923E4 737 aa10.35□□□□□ -0.75
Cux1-201ENSMUST00000004097 Ca8P28651 291 aa10.35□□□□□ -0.75
Cux1-201ENSMUST00000004097 Slc4a10Q5DTL9 1118 aa10.35□□□□□ -0.75
Cux1-201ENSMUST00000004097 Fam193aQ8CGI1 1231 aaKnown RBP10.35□□□□□ -0.75
Cux1-201ENSMUST00000004097 Sart3Q9JLI8 962 aaKnown RBP10.35□□□□□ -0.75
Cux1-201ENSMUST00000004097 Cabp4Q8VHC5 271 aa10.34□□□□□ -0.75
Cux1-201ENSMUST00000004097 Mtus2Q3UHD3 1353 aa10.34□□□□□ -0.75
Cux1-201ENSMUST00000004097 Wdr43Q6ZQL4 677 aaKnown RBP10.33□□□□□ -0.76
Cux1-201ENSMUST00000004097 Sall2Q9QX96 1004 aa10.33□□□□□ -0.76
Cux1-201ENSMUST00000004097 Ccp110Q7TSH4 1004 aa10.33□□□□□ -0.76
Cux1-201ENSMUST00000004097 Atf3Q60765 181 aa10.32□□□□□ -0.76
Cux1-201ENSMUST00000004097 Brd4Q9ESU6 1400 aaKnown RBP10.32□□□□□ -0.76
Cux1-201ENSMUST00000004097 Setd5Q5XJV7 1441 aa10.31□□□□□ -0.76
Cux1-201ENSMUST00000004097 Znf428Q8C1M2 176 aa10.31□□□□□ -0.76
Cux1-201ENSMUST00000004097 Chmp4bQ9D8B3 224 aaKnown RBP10.31□□□□□ -0.76
Cux1-201ENSMUST00000004097 Lemd3Q9WU40 921 aa10.31□□□□□ -0.76
Cux1-201ENSMUST00000004097 IkQ9Z1M8 557 aaKnown RBP10.31□□□□□ -0.76
Cux1-201ENSMUST00000004097 Rbm19Q8R3C6 952 aaKnown RBP10.3□□□□□ -0.76
Cux1-201ENSMUST00000004097 Ifit1bl1D3Z6F0 470 aa10.3□□□□□ -0.76
Cux1-201ENSMUST00000004097 Erich6bQ9D4S6 220 aa10.29□□□□□ -0.76
Cux1-201ENSMUST00000004097 Gm21969J3QJZ1 289 aa10.29□□□□□ -0.76
Cux1-201ENSMUST00000004097 U2af1Q9D883 239 aaKnown RBP10.29□□□□□ -0.76
Cux1-201ENSMUST00000004097 Zpr1Q62384 459 aa10.28□□□□□ -0.76
Cux1-201ENSMUST00000004097 Ccdc18Q640L5 1455 aa10.28□□□□□ -0.76
Cux1-201ENSMUST00000004097 Ccdc47Q9D024 483 aaKnown RBP10.28□□□□□ -0.76
Cux1-201ENSMUST00000004097 Map4P27546 1125 aaKnown RBP10.28□□□□□ -0.76
Cux1-201ENSMUST00000004097 Skap1Q3UUV5 355 aa10.27□□□□□ -0.76
Cux1-201ENSMUST00000004097 Tpm4Q6IRU2 248 aa10.27□□□□□ -0.76
Cux1-201ENSMUST00000004097 Cep164Q5DU05 1446 aa10.27□□□□□ -0.77
Cux1-201ENSMUST00000004097 Gm973E9Q295 1059 aa10.27□□□□□ -0.77
Cux1-201ENSMUST00000004097 Ftsj3Q9DBE9 838 aaKnown RBP10.26□□□□□ -0.77
Cux1-201ENSMUST00000004097 Ddx11Q6AXC6 880 aa10.25□□□□□ -0.77
Cux1-201ENSMUST00000004097 Evi5lH3BKQ3 813 aa10.25□□□□□ -0.77
Cux1-201ENSMUST00000004097 Cluap1Q8R3P7 413 aa10.25□□□□□ -0.77
Cux1-201ENSMUST00000004097 Kif3bQ61771 747 aa10.25□□□□□ -0.77
Cux1-201ENSMUST00000004097 Fyb1O35601 819 aa10.25□□□□□ -0.77
Cux1-201ENSMUST00000004097 Abl1P00520 1123 aa10.25□□□□□ -0.77
Cux1-201ENSMUST00000004097 Ccer1Q9CQL2 403 aa10.25□□□□□ -0.77
Cux1-201ENSMUST00000004097 Gtf2e1Q9D0D5 440 aa10.25□□□□□ -0.77
Cux1-201ENSMUST00000004097 Erich4Q3UNU4 136 aa10.24□□□□□ -0.77
Cux1-201ENSMUST00000004097 Chmp7Q8R1T1 451 aa10.24□□□□□ -0.77
Cux1-201ENSMUST00000004097 HnrnpuQ8VEK3 800 aaKnown RBP10.24□□□□□ -0.77
Cux1-201ENSMUST00000004097 KnstrnQ9D9Z1 312 aaKnown RBP10.24□□□□□ -0.77
Cux1-201ENSMUST00000004097 March6Q6ZQ89 909 aa10.23□□□□□ -0.77
Cux1-201ENSMUST00000004097 GlmnQ8BZM1 596 aa10.23□□□□□ -0.77
Cux1-201ENSMUST00000004097 Cc2d1aQ8K1A6 943 aa10.23□□□□□ -0.77
Cux1-201ENSMUST00000004097 Adam1bQ8R534 806 aa10.23□□□□□ -0.77
Cux1-201ENSMUST00000004097 Eif2s2Q99L45 331 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms