RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W SEC66P33754 206 aa2.37□□□□□ -2.03
BRO1YPL084W TCM62P38228 572 aaKnown RBP2.37□□□□□ -2.03
BRO1YPL084W MBB1P39534 108 aa2.37□□□□□ -2.03
BRO1YPL084W LSM5P40089 93 aaKnown RBP2.37□□□□□ -2.03
BRO1YPL084W ZPR1P53303 486 aaKnown RBP2.37□□□□□ -2.03
BRO1YPL084W YGR250CP53316 781 aaKnown RBP2.37□□□□□ -2.03
BRO1YPL084W MPS1P54199 764 aa2.37□□□□□ -2.03
BRO1YPL084W RSF1Q05043 376 aa2.37□□□□□ -2.03
BRO1YPL084W RQC1Q05468 723 aaKnown RBP2.37□□□□□ -2.03
BRO1YPL084W FMP45Q07651 309 aa2.37□□□□□ -2.03
BRO1YPL084W SRL1Q08673 210 aa2.37□□□□□ -2.03
BRO1YPL084W YOR365CQ08844 703 aa2.37□□□□□ -2.03
BRO1YPL084W ARP6Q12509 438 aa2.37□□□□□ -2.03
BRO1YPL084W PMS1P14242 873 aa2.37□□□□□ -2.03
BRO1YPL084W HNM1P19807 563 aa2.37□□□□□ -2.03
BRO1YPL084W CLB3P24870 427 aa2.37□□□□□ -2.03
BRO1YPL084W BNA4P38169 460 aa2.37□□□□□ -2.03
BRO1YPL084W EFM2P38347 419 aa2.37□□□□□ -2.03
BRO1YPL084W MET30P39014 640 aa2.37□□□□□ -2.03
BRO1YPL084W TIF4631P39935 952 aaKnown RBP2.37□□□□□ -2.03
BRO1YPL084W YIL169CP40442 995 aa2.37□□□□□ -2.03
BRO1YPL084W YJR154WP47181 346 aa2.37□□□□□ -2.03
BRO1YPL084W HEF3P53978 1044 aaKnown RBP2.37□□□□□ -2.03
BRO1YPL084W GLO2Q05584 274 aa2.37□□□□□ -2.03
BRO1YPL084W YLR352WQ06479 807 aa2.37□□□□□ -2.03
BRO1YPL084W ICT1Q12385 394 aa2.37□□□□□ -2.03
BRO1YPL084W RPL3P14126 387 aaKnown RBP2.36□□□□□ -2.03
BRO1YPL084W ACH1P32316 526 aa2.36□□□□□ -2.03
BRO1YPL084W NFU1P32860 256 aa2.36□□□□□ -2.03
BRO1YPL084W SPC34P36131 295 aa2.36□□□□□ -2.03
BRO1YPL084W YER130CP39959 443 aa2.36□□□□□ -2.03
BRO1YPL084W AZF1P41696 914 aa2.36□□□□□ -2.03
BRO1YPL084W TES1P41903 349 aaKnown RBP2.36□□□□□ -2.03
BRO1YPL084W ATG27P46989 271 aa2.36□□□□□ -2.03
BRO1YPL084W TDA7P53882 636 aaPredicted RBP2.36□□□□□ -2.03
BRO1YPL084W YPL068CQ02749 293 aa2.36□□□□□ -2.03
BRO1YPL084W MSS11Q03825 758 aa2.36□□□□□ -2.03
BRO1YPL084W RAV1P47104 1357 aa2.36□□□□□ -2.03
BRO1YPL084W TYR1P20049 452 aa2.36□□□□□ -2.03
BRO1YPL084W MIC60P36112 540 aa2.36□□□□□ -2.03
BRO1YPL084W SEC5P89102 971 aa2.36□□□□□ -2.03
BRO1YPL084W TAP42Q04372 366 aa2.36□□□□□ -2.03
BRO1YPL084W FMP42Q04991 504 aa2.36□□□□□ -2.03
BRO1YPL084W RBS1Q05672 457 aaKnown RBP2.36□□□□□ -2.03
BRO1YPL084W YAP7Q08182 245 aa2.36□□□□□ -2.03
BRO1YPL084W CSR2Q12734 1121 aa2.36□□□□□ -2.03
BRO1YPL084W BAR1P12630 587 aa2.35□□□□□ -2.03
BRO1YPL084W RPN2P32565 945 aaKnown RBP2.35□□□□□ -2.03
BRO1YPL084W TMT1P32643 299 aa2.35□□□□□ -2.03
BRO1YPL084W TRS65P32893 560 aa2.35□□□□□ -2.03
BRO1YPL084W MSN2P33748 704 aa2.35□□□□□ -2.03
BRO1YPL084W DUG2P38149 878 aa2.35□□□□□ -2.03
BRO1YPL084W ALT2P52892 507 aa2.35□□□□□ -2.03
BRO1YPL084W SAM50P53969 484 aa2.35□□□□□ -2.03
BRO1YPL084W GIR2Q03768 265 aaPredicted RBP2.35□□□□□ -2.03
BRO1YPL084W THI20Q08224 551 aa2.35□□□□□ -2.03
BRO1YPL084W APE1P14904 514 aa2.35□□□□□ -2.03
BRO1YPL084W SEC62P21825 274 aa2.35□□□□□ -2.03
BRO1YPL084W PPH22P23595 377 aa2.35□□□□□ -2.03
BRO1YPL084W RPC53P25441 422 aa2.35□□□□□ -2.03
BRO1YPL084W AFG1P32317 509 aa2.35□□□□□ -2.03
BRO1YPL084W HXT3P32466 567 aaKnown RBP2.35□□□□□ -2.03
BRO1YPL084W ERG1P32476 496 aaKnown RBP2.35□□□□□ -2.03
BRO1YPL084W VPS17P32913 551 aa2.35□□□□□ -2.03
BRO1YPL084W OSH3P38713 996 aaKnown RBP2.35□□□□□ -2.03
BRO1YPL084W KEL1P38853 1164 aaKnown RBP2.35□□□□□ -2.03
BRO1YPL084W YIR014WP40570 242 aa2.35□□□□□ -2.03
BRO1YPL084W GUF1P46943 645 aa2.35□□□□□ -2.03
BRO1YPL084W YGL082WP53155 381 aa2.35□□□□□ -2.03
BRO1YPL084W RPA49Q01080 415 aaPredicted RBP2.35□□□□□ -2.03
BRO1YPL084W YMR087WQ04299 284 aa2.35□□□□□ -2.03
BRO1YPL084W RBA50Q04418 439 aa2.35□□□□□ -2.03
BRO1YPL084W YEH2Q07950 538 aa2.35□□□□□ -2.03
BRO1YPL084W NRT1Q08485 598 aa2.35□□□□□ -2.03
BRO1YPL084W INO80P53115 1489 aa2.34□□□□□ -2.03
BRO1YPL084W SUC2P00724 532 aa2.34□□□□□ -2.03
BRO1YPL084W MES1P00958 751 aaKnown RBP2.34□□□□□ -2.03
BRO1YPL084W GLN3P18494 730 aa2.34□□□□□ -2.03
BRO1YPL084W SPB1P25582 841 aaPredicted RBP2.34□□□□□ -2.03
BRO1YPL084W YNK1P36010 153 aaKnown RBP2.34□□□□□ -2.03
BRO1YPL084W RKM3P38222 552 aa2.34□□□□□ -2.03
BRO1YPL084W RRP3P38712 501 aaKnown RBP2.34□□□□□ -2.03
BRO1YPL084W POP1P41812 875 aa2.34□□□□□ -2.03
BRO1YPL084W SSU1P41930 458 aa2.34□□□□□ -2.03
BRO1YPL084W SAD1P43589 448 aa2.34□□□□□ -2.03
BRO1YPL084W YGL108CP53139 140 aa2.34□□□□□ -2.03
BRO1YPL084W MNP1P53163 194 aaPredicted RBP2.34□□□□□ -2.03
BRO1YPL084W SLG1P54867 378 aa2.34□□□□□ -2.03
BRO1YPL084W YLR281CQ05863 155 aa2.34□□□□□ -2.03
BRO1YPL084W VTA1Q06263 330 aa2.34□□□□□ -2.03
BRO1YPL084W PHO92Q06390 306 aa2.34□□□□□ -2.03
BRO1YPL084W PDX1P16451 410 aa2.34□□□□□ -2.04
BRO1YPL084W IDH2P28241 369 aaKnown RBP2.34□□□□□ -2.04
BRO1YPL084W UTR4P32626 227 aa2.34□□□□□ -2.04
BRO1YPL084W ECM15P35195 104 aa2.34□□□□□ -2.04
BRO1YPL084W YND1P40009 630 aa2.34□□□□□ -2.04
BRO1YPL084W CSM2P40465 213 aa2.34□□□□□ -2.04
BRO1YPL084W SCD6P45978 349 aaKnown RBP RIP-Chip data2.34□□□□□ -2.04 RIP-Chip
BRO1YPL084W DLD2P46681 530 aaKnown RBP2.34□□□□□ -2.04
BRO1YPL084W YGR149WP48236 432 aa2.34□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms