RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C FMP46P36141 133 aaKnown RBP7.75□□□□□ -1.17
LSP1YPL004C LEU5P38702 357 aa7.75□□□□□ -1.17
LSP1YPL004C HXT6P39003 570 aaKnown RBP7.75□□□□□ -1.17
LSP1YPL004C HXT7P39004 570 aa7.75□□□□□ -1.17
LSP1YPL004C RGA1P39083 1007 aa7.75□□□□□ -1.17
LSP1YPL004C GCD10P41814 478 aa7.75□□□□□ -1.17
LSP1YPL004C GTR2P53290 341 aa7.75□□□□□ -1.17
LSP1YPL004C MRS2Q01926 470 aa7.75□□□□□ -1.17
LSP1YPL004C MTQ2Q03920 221 aaPredicted RBP7.75□□□□□ -1.17
LSP1YPL004C YOL107WQ12239 342 aa7.75□□□□□ -1.17
LSP1YPL004C STB3Q12427 513 aa7.75□□□□□ -1.17
LSP1YPL004C NOT5Q12514 560 aaPredicted RBP7.75□□□□□ -1.17
LSP1YPL004C YLR111WQ12528 110 aa7.75□□□□□ -1.17
LSP1YPL004C YIL046W-AQ3E7Z4 54 aa7.75□□□□□ -1.17
LSP1YPL004C SRN2Q99176 213 aa7.75□□□□□ -1.17
LSP1YPL004C SLH1P53327 1967 aaKnown RBP7.74□□□□□ -1.17
LSP1YPL004C YMR085WP0CF18 432 aa7.74□□□□□ -1.17
LSP1YPL004C RPS4AP0CX35 261 aaKnown RBP7.74□□□□□ -1.17
LSP1YPL004C RPS4BP0CX36 261 aaKnown RBP7.74□□□□□ -1.17
LSP1YPL004C PTP1P25044 335 aa7.74□□□□□ -1.17
LSP1YPL004C BUB3P26449 341 aa7.74□□□□□ -1.17
LSP1YPL004C NRP1P32770 719 aaKnown RBP RIP-Chip data7.74□□□□□ -1.17not detected
LSP1YPL004C KKQ8P36004 724 aa7.74□□□□□ -1.17
LSP1YPL004C CTP1P38152 299 aa7.74□□□□□ -1.17
LSP1YPL004C SEC31P38968 1273 aaKnown RBP7.74□□□□□ -1.17
LSP1YPL004C PLB1P39105 664 aa7.74□□□□□ -1.17
LSP1YPL004C MNT3P40549 630 aa7.74□□□□□ -1.17
LSP1YPL004C CFD1P40558 293 aa7.74□□□□□ -1.17
LSP1YPL004C SEC27P41811 889 aaKnown RBP7.74□□□□□ -1.17
LSP1YPL004C TRS85P46944 698 aa7.74□□□□□ -1.17
LSP1YPL004C ERG26P53199 349 aaKnown RBP7.74□□□□□ -1.17
LSP1YPL004C RRN11Q04712 507 aa7.74□□□□□ -1.17
LSP1YPL004C DIC1Q06143 298 aa7.74□□□□□ -1.17
LSP1YPL004C YPR011CQ12251 326 aa7.74□□□□□ -1.17
LSP1YPL004C MHT1Q12525 324 aa7.74□□□□□ -1.17
LSP1YPL004C PRP6P19735 899 aaPredicted RBP7.73□□□□□ -1.17
LSP1YPL004C PRP2P20095 876 aaPredicted RBP7.73□□□□□ -1.17
LSP1YPL004C NTH1P32356 751 aa7.73□□□□□ -1.17
LSP1YPL004C COX13P32799 129 aa7.73□□□□□ -1.17
LSP1YPL004C YBR071WP38243 211 aa7.73□□□□□ -1.17
LSP1YPL004C VMA13P41807 478 aaKnown RBP7.73□□□□□ -1.17
LSP1YPL004C YGL176CP46945 554 aa7.73□□□□□ -1.17
LSP1YPL004C YJR154WP47181 346 aa7.73□□□□□ -1.17
LSP1YPL004C NOP19P53317 196 aaPredicted RBP7.73□□□□□ -1.17
LSP1YPL004C SDH1Q00711 640 aa7.73□□□□□ -1.17
LSP1YPL004C BSC6Q08280 497 aa7.73□□□□□ -1.17
LSP1YPL004C YLR049CQ12110 428 aa7.73□□□□□ -1.17
LSP1YPL004C YPL245WQ12179 454 aaKnown RBP7.73□□□□□ -1.17
LSP1YPL004C HAL9Q12180 1030 aa7.73□□□□□ -1.17
LSP1YPL004C YOR114WQ12219 294 aa7.73□□□□□ -1.17
LSP1YPL004C LAG2Q92325 660 aa7.73□□□□□ -1.17
LSP1YPL004C KIN2P13186 1147 aaKnown RBP7.72□□□□□ -1.17
LSP1YPL004C HOG1P32485 435 aa7.72□□□□□ -1.17
LSP1YPL004C SFA1P32771 386 aa7.72□□□□□ -1.17
LSP1YPL004C LOS1P33418 1100 aaPredicted RBP7.72□□□□□ -1.17
LSP1YPL004C WBP1P33767 430 aaKnown RBP7.72□□□□□ -1.17
LSP1YPL004C SQT1P35184 431 aa7.72□□□□□ -1.17
LSP1YPL004C BMT2P38278 337 aa7.72□□□□□ -1.17
LSP1YPL004C YBR238CP38330 731 aaKnown RBP7.72□□□□□ -1.17
LSP1YPL004C UTP9P38882 575 aaKnown RBP7.72□□□□□ -1.17
LSP1YPL004C FKH2P41813 862 aa7.72□□□□□ -1.17
LSP1YPL004C MET12P46151 657 aa7.72□□□□□ -1.17
LSP1YPL004C RIM21P48565 533 aa7.72□□□□□ -1.17
LSP1YPL004C KXD1P53158 218 aa7.72□□□□□ -1.17
LSP1YPL004C YGR250CP53316 781 aaKnown RBP7.72□□□□□ -1.17
LSP1YPL004C ESF2P53743 316 aaKnown RBP7.72□□□□□ -1.17
LSP1YPL004C ROY1Q04847 553 aa7.72□□□□□ -1.17
LSP1YPL004C RRP45Q05636 305 aaKnown RBP7.72□□□□□ -1.17
LSP1YPL004C YLR030WQ07967 263 aa7.72□□□□□ -1.17
LSP1YPL004C LEU9Q12166 604 aaKnown RBP7.72□□□□□ -1.17
LSP1YPL004C BMT6Q12291 365 aa7.72□□□□□ -1.17
LSP1YPL004C CYR1P08678 2026 aaKnown RBP7.71□□□□□ -1.17
LSP1YPL004C RPS21AP0C0V8 87 aaKnown RBP7.71□□□□□ -1.18
LSP1YPL004C TEC1P18412 486 aa7.71□□□□□ -1.18
LSP1YPL004C TYR1P20049 452 aa7.71□□□□□ -1.18
LSP1YPL004C DAL82P21705 255 aa7.71□□□□□ -1.18
LSP1YPL004C ADE1P27616 306 aa7.71□□□□□ -1.18
LSP1YPL004C EAP1P36041 632 aaKnown RBP7.71□□□□□ -1.18
LSP1YPL004C YBR062CP38239 180 aa7.71□□□□□ -1.18
LSP1YPL004C HSM3P38348 480 aa7.71□□□□□ -1.18
LSP1YPL004C BZZ1P38822 633 aa7.71□□□□□ -1.18
LSP1YPL004C MET30P39014 640 aa7.71□□□□□ -1.18
LSP1YPL004C CIN4P39110 191 aa7.71□□□□□ -1.18
LSP1YPL004C SCS2P40075 244 aaKnown RBP7.71□□□□□ -1.18
LSP1YPL004C MET18P40469 1032 aa7.71□□□□□ -1.18
LSP1YPL004C APQ12P40532 138 aa7.71□□□□□ -1.18
LSP1YPL004C YPT32P51996 222 aaKnown RBP7.71□□□□□ -1.18
LSP1YPL004C YGR053CP53234 283 aa7.71□□□□□ -1.18
LSP1YPL004C FHN1P53279 174 aa7.71□□□□□ -1.18
LSP1YPL004C YNR021WP53723 404 aaKnown RBP7.71□□□□□ -1.18
LSP1YPL004C MPS1P54199 764 aa7.71□□□□□ -1.18
LSP1YPL004C SHE9Q04172 456 aa7.71□□□□□ -1.18
LSP1YPL004C YMR111CQ04461 462 aaPredicted RBP7.71□□□□□ -1.18
LSP1YPL004C YOL036WQ08206 761 aa7.71□□□□□ -1.18
LSP1YPL004C IRC13Q08630 104 aa7.71□□□□□ -1.18
LSP1YPL004C FAS1P07149 2051 aaKnown RBP7.71□□□□□ -1.18
LSP1YPL004C HOP1P20050 605 aa7.7□□□□□ -1.18
LSP1YPL004C CDC10P25342 322 aaKnown RBP7.7□□□□□ -1.18
LSP1YPL004C TRX3P25372 127 aa7.7□□□□□ -1.18
LSP1YPL004C BUB2P26448 306 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms