RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C TPS2P31688 896 aaKnown RBP8.18□□□□□ -1.1
PUP1YOR157C VHC1P38329 1120 aa8.18□□□□□ -1.1
PUP1YOR157C NDE1P40215 560 aa8.18□□□□□ -1.1
PUP1YOR157C PET130P47065 347 aa8.18□□□□□ -1.1
PUP1YOR157C YJR149WP47177 404 aa8.18□□□□□ -1.1
PUP1YOR157C BTN2P53286 410 aa8.18□□□□□ -1.1
PUP1YOR157C PRP38Q00723 242 aaPredicted RBP8.18□□□□□ -1.1
PUP1YOR157C CYK3Q07533 885 aa8.18□□□□□ -1.1
PUP1YOR157C AIR2Q12476 344 aaKnown RBP8.18□□□□□ -1.1
PUP1YOR157C DYN1P36022 4092 aa8.18□□□□□ -1.1
PUP1YOR157C IMA3P0CW40 589 aa8.17□□□□□ -1.1
PUP1YOR157C IMA4P0CW41 589 aa8.17□□□□□ -1.1
PUP1YOR157C ATP12P22135 325 aa8.17□□□□□ -1.1
PUP1YOR157C HXT1P32465 570 aa8.17□□□□□ -1.1
PUP1YOR157C NAB2P32505 525 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
PUP1YOR157C TCD1P38756 429 aa8.17□□□□□ -1.1
PUP1YOR157C FMP52P40008 231 aa8.17□□□□□ -1.1
PUP1YOR157C MNT3P40549 630 aa8.17□□□□□ -1.1
PUP1YOR157C TIS11P47977 285 aa8.17□□□□□ -1.1
PUP1YOR157C BIO3P50277 480 aa8.17□□□□□ -1.1
PUP1YOR157C ATG4P53867 494 aa8.17□□□□□ -1.1
PUP1YOR157C XYL2Q07993 356 aa8.17□□□□□ -1.1
PUP1YOR157C IMA2Q08295 589 aa8.17□□□□□ -1.1
PUP1YOR157C APL4Q12028 832 aa8.17□□□□□ -1.1
PUP1YOR157C COX17Q12287 69 aa8.17□□□□□ -1.1
PUP1YOR157C RGT2Q12300 763 aa8.17□□□□□ -1.1
PUP1YOR157C GLK1P17709 500 aaKnown RBP8.16□□□□□ -1.1
PUP1YOR157C HSP60P19882 572 aaKnown RBP8.16□□□□□ -1.1
PUP1YOR157C RPB10P22139 70 aa8.16□□□□□ -1.1
PUP1YOR157C MGR1P25573 417 aa8.16□□□□□ -1.1
PUP1YOR157C NUD1P32336 851 aa8.16□□□□□ -1.1
PUP1YOR157C EBP2P36049 427 aaKnown RBP8.16□□□□□ -1.1
PUP1YOR157C EFM1P38732 585 aa8.16□□□□□ -1.1
PUP1YOR157C GGC1P38988 300 aa8.16□□□□□ -1.1
PUP1YOR157C TPA1P40032 644 aaKnown RBP8.16□□□□□ -1.1
PUP1YOR157C YNR021WP53723 404 aaKnown RBP8.16□□□□□ -1.1
PUP1YOR157C SNP1Q00916 300 aaPredicted RBP8.16□□□□□ -1.1
PUP1YOR157C PRP6P19735 899 aaPredicted RBP8.15□□□□□ -1.1
PUP1YOR157C TAH1P25638 111 aaPredicted RBP8.15□□□□□ -1.1
PUP1YOR157C CDC20P26309 610 aa8.15□□□□□ -1.1
PUP1YOR157C KKQ8P36004 724 aa8.15□□□□□ -1.1
PUP1YOR157C APT2P36973 181 aa8.15□□□□□ -1.1
PUP1YOR157C YHR112CP38716 378 aa8.15□□□□□ -1.1
PUP1YOR157C RPL10P41805 221 aaKnown RBP8.15□□□□□ -1.1
PUP1YOR157C YPS7Q06325 596 aa8.15□□□□□ -1.1
PUP1YOR157C SYT1Q06836 1226 aa8.15□□□□□ -1.1
PUP1YOR157C SLH1P53327 1967 aaKnown RBP8.15□□□□□ -1.11
PUP1YOR157C SEC53P07283 254 aaKnown RBP8.14□□□□□ -1.11
PUP1YOR157C RPS21AP0C0V8 87 aaKnown RBP8.14□□□□□ -1.11
PUP1YOR157C SRB4P32569 687 aa8.14□□□□□ -1.11
PUP1YOR157C MSG5P38590 489 aa8.14□□□□□ -1.11
PUP1YOR157C YHI9P38765 294 aa8.14□□□□□ -1.11
PUP1YOR157C TOK1P40310 691 aa8.14□□□□□ -1.11
PUP1YOR157C RPN14P53196 417 aa8.14□□□□□ -1.11
PUP1YOR157C SPP2Q02521 185 aa8.14□□□□□ -1.11
PUP1YOR157C NUP116Q02630 1113 aa8.14□□□□□ -1.11
PUP1YOR157C OAZ1Q02803 292 aa8.14□□□□□ -1.11
PUP1YOR157C ATG21Q02887 496 aa8.14□□□□□ -1.11
PUP1YOR157C MSS116P15424 664 aaKnown RBP8.13□□□□□ -1.11
PUP1YOR157C URA10P30402 227 aa8.13□□□□□ -1.11
PUP1YOR157C ZIP1P31111 875 aa8.13□□□□□ -1.11
PUP1YOR157C YMC1P32331 307 aa8.13□□□□□ -1.11
PUP1YOR157C RTG1P32607 177 aa8.13□□□□□ -1.11
PUP1YOR157C SDH3P33421 198 aa8.13□□□□□ -1.11
PUP1YOR157C YDR089WP38966 869 aa8.13□□□□□ -1.11
PUP1YOR157C VPS52P39904 641 aa8.13□□□□□ -1.11
PUP1YOR157C STB2P46679 850 aa8.13□□□□□ -1.11
PUP1YOR157C YJR115WP47152 169 aa8.13□□□□□ -1.11
PUP1YOR157C MDM34P53083 459 aa8.13□□□□□ -1.11
PUP1YOR157C MPS1P54199 764 aa8.13□□□□□ -1.11
PUP1YOR157C YSA1Q01976 231 aa8.13□□□□□ -1.11
PUP1YOR157C YPL068CQ02749 293 aa8.13□□□□□ -1.11
PUP1YOR157C UTP13Q05946 817 aaKnown RBP8.13□□□□□ -1.11
PUP1YOR157C YLR352WQ06479 807 aa8.13□□□□□ -1.11
PUP1YOR157C SRN2Q99176 213 aa8.13□□□□□ -1.11
PUP1YOR157C MGT1P26188 188 aa8.12□□□□□ -1.11
PUP1YOR157C ERG1P32476 496 aaKnown RBP8.12□□□□□ -1.11
PUP1YOR157C SUI1P32911 108 aaKnown RBP8.12□□□□□ -1.11
PUP1YOR157C MRPL10P36520 322 aa8.12□□□□□ -1.11
PUP1YOR157C PBP2P38151 413 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
PUP1YOR157C AXL2P38928 823 aa8.12□□□□□ -1.11
PUP1YOR157C PAC1P39946 494 aaKnown RBP8.12□□□□□ -1.11
PUP1YOR157C SNO3P43544 222 aa8.12□□□□□ -1.11
PUP1YOR157C TIM54P47045 478 aa8.12□□□□□ -1.11
PUP1YOR157C MAL11P53048 616 aa8.12□□□□□ -1.11
PUP1YOR157C ROG1P53118 685 aa8.12□□□□□ -1.11
PUP1YOR157C BOP2Q06150 570 aa8.12□□□□□ -1.11
PUP1YOR157C ATG23Q06671 453 aa8.12□□□□□ -1.11
PUP1YOR157C MUD2P36084 527 aaKnown RBP8.11□□□□□ -1.11
PUP1YOR157C NPT1P39683 429 aaKnown RBP8.11□□□□□ -1.11
PUP1YOR157C MEP1P40260 492 aa8.11□□□□□ -1.11
PUP1YOR157C ICE2P40499 491 aa8.11□□□□□ -1.11
PUP1YOR157C NEO1P40527 1151 aa8.11□□□□□ -1.11
PUP1YOR157C APQ12P40532 138 aa8.11□□□□□ -1.11
PUP1YOR157C PAC11P40960 533 aa8.11□□□□□ -1.11
PUP1YOR157C SPT20P50875 604 aa8.11□□□□□ -1.11
PUP1YOR157C RTA1P53047 317 aa8.11□□□□□ -1.11
PUP1YOR157C RIM8P53179 542 aa8.11□□□□□ -1.11
PUP1YOR157C MOT3P54785 490 aaKnown RBP8.11□□□□□ -1.11
PUP1YOR157C SDH1Q00711 640 aa8.11□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms