RNA–Protein interactions for RNA: YNL260C

LTO1, Transcript of Essential protein that forms a complex with Rli1p and Yae1p, yeast

Gene LTO1, Length 597 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LTO1	YNL260C	LRP1	P38801	184 aa	Known RBP	4.63	□□□□□ -1.67
LTO1	YNL260C	YHR210C	P38893	341 aa		4.63	□□□□□ -1.67
LTO1	YNL260C	PHO90	P39535	881 aa		4.63	□□□□□ -1.67
LTO1	YNL260C	NET1	P47035	1189 aa		4.63	□□□□□ -1.67
LTO1	YNL260C	YGR149W	P48236	432 aa		4.63	□□□□□ -1.67
LTO1	YNL260C	ZPR1	P53303	486 aa	Known RBP	4.63	□□□□□ -1.67
LTO1	YNL260C	HEF3	P53978	1044 aa	Known RBP	4.63	□□□□□ -1.67
LTO1	YNL260C	YPL014W	Q02606	381 aa		4.63	□□□□□ -1.67
LTO1	YNL260C	NUP100	Q02629	959 aa		4.63	□□□□□ -1.67
LTO1	YNL260C	KAP120	Q02932	1032 aa		4.63	□□□□□ -1.67
LTO1	YNL260C	EKI1	Q03764	534 aa		4.63	□□□□□ -1.67
LTO1	YNL260C	GYL1	Q04322	720 aa		4.63	□□□□□ -1.67
LTO1	YNL260C	FMP45	Q07651	309 aa		4.63	□□□□□ -1.67
LTO1	YNL260C	RPL42A	P0CX27	106 aa	Known RBP	4.62	□□□□□ -1.67
LTO1	YNL260C	RPL42B	P0CX28	106 aa	Known RBP	4.62	□□□□□ -1.67
LTO1	YNL260C	IDH2	P28241	369 aa	Known RBP	4.62	□□□□□ -1.67
LTO1	YNL260C	URA7	P28274	579 aa	Known RBP	4.62	□□□□□ -1.67
LTO1	YNL260C	SNC1	P31109	117 aa		4.62	□□□□□ -1.67
LTO1	YNL260C	RML2	P32611	393 aa		4.62	□□□□□ -1.67
LTO1	YNL260C	YGL108C	P53139	140 aa		4.62	□□□□□ -1.67
LTO1	YNL260C	RCF1	Q03713	159 aa		4.62	□□□□□ -1.67
LTO1	YNL260C	TAP42	Q04372	366 aa		4.62	□□□□□ -1.67
LTO1	YNL260C	ATX2	Q12067	313 aa		4.62	□□□□□ -1.67
LTO1	YNL260C	RAD52	P06778	471 aa	Known RBP	4.61	□□□□□ -1.67
LTO1	YNL260C	APE1	P14904	514 aa		4.61	□□□□□ -1.67
LTO1	YNL260C	MNE1	P24720	663 aa		4.61	□□□□□ -1.67
LTO1	YNL260C	YME2	P32843	850 aa		4.61	□□□□□ -1.67
LTO1	YNL260C	TCM62	P38228	572 aa	Known RBP	4.61	□□□□□ -1.67
LTO1	YNL260C	NTC20	P38302	140 aa	Predicted RBP	4.61	□□□□□ -1.67
LTO1	YNL260C	YMR124W	P39523	943 aa	Known RBP	4.61	□□□□□ -1.67
LTO1	YNL260C	YIR016W	P40572	265 aa		4.61	□□□□□ -1.67
LTO1	YNL260C	YGL138C	P53122	345 aa		4.61	□□□□□ -1.67
LTO1	YNL260C	YNL181W	P53878	407 aa		4.61	□□□□□ -1.67
LTO1	YNL260C	STP1	Q00947	519 aa		4.61	□□□□□ -1.67
LTO1	YNL260C	BRR1	Q99177	341 aa	Predicted RBP	4.61	□□□□□ -1.67
LTO1	YNL260C	ISN1	Q99312	450 aa		4.61	□□□□□ -1.67
LTO1	YNL260C	YPR089W	O13585	888 aa		4.6	□□□□□ -1.67
LTO1	YNL260C	SPS4	P09937	338 aa		4.6	□□□□□ -1.67
LTO1	YNL260C	YER190C-B	P0CX94	160 aa		4.6	□□□□□ -1.67
LTO1	YNL260C	YEL077W-A	P0CX95	160 aa		4.6	□□□□□ -1.67
LTO1	YNL260C	YGR296C-B	P0CX96	160 aa		4.6	□□□□□ -1.67
LTO1	YNL260C	YPL283W-B	P0CX97	160 aa		4.6	□□□□□ -1.67
LTO1	YNL260C	YPR204C-A	P0CX98	160 aa		4.6	□□□□□ -1.67
LTO1	YNL260C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
LTO1	YNL260C	GID7	P25569	745 aa		4.6	□□□□□ -1.67
LTO1	YNL260C	YIM1	P28625	365 aa		4.6	□□□□□ -1.67
LTO1	YNL260C	YPK3	P38070	525 aa		4.6	□□□□□ -1.67
LTO1	YNL260C	TIF4631	P39935	952 aa	Known RBP	4.6	□□□□□ -1.67
LTO1	YNL260C	POP1	P41812	875 aa		4.6	□□□□□ -1.67
LTO1	YNL260C	FMS1	P50264	508 aa		4.6	□□□□□ -1.67
LTO1	YNL260C	RPL15B	P54780	204 aa	Predicted RBP	4.6	□□□□□ -1.67
LTO1	YNL260C	SOV1	Q04748	898 aa		4.6	□□□□□ -1.67
LTO1	YNL260C	DON1	Q05610	365 aa		4.6	□□□□□ -1.67
LTO1	YNL260C	RRP45	Q05636	305 aa	Known RBP	4.6	□□□□□ -1.67
LTO1	YNL260C	DIC1	Q06143	298 aa		4.6	□□□□□ -1.67
LTO1	YNL260C	YOR365C	Q08844	703 aa		4.6	□□□□□ -1.67
LTO1	YNL260C	RHO2	P06781	192 aa		4.59	□□□□□ -1.67
LTO1	YNL260C	AIM17	P23180	465 aa	Known RBP	4.59	□□□□□ -1.67
LTO1	YNL260C	CPR2	P23285	205 aa		4.59	□□□□□ -1.67
LTO1	YNL260C	MSN2	P33748	704 aa		4.59	□□□□□ -1.67
LTO1	YNL260C	PHD1	P36093	366 aa		4.59	□□□□□ -1.67
LTO1	YNL260C	DUG2	P38149	878 aa		4.59	□□□□□ -1.67
LTO1	YNL260C	ERG7	P38604	731 aa		4.59	□□□□□ -1.67
LTO1	YNL260C	JEM1	P40358	645 aa		4.59	□□□□□ -1.67
LTO1	YNL260C	IAH1	P41734	238 aa		4.59	□□□□□ -1.67
LTO1	YNL260C	CAK1	P43568	368 aa	Predicted RBP	4.59	□□□□□ -1.67
LTO1	YNL260C	TCB2	P48231	1178 aa		4.59	□□□□□ -1.67
LTO1	YNL260C	OCA1	P50946	238 aa	Predicted RBP	4.59	□□□□□ -1.67
LTO1	YNL260C	DRN1	P53255	507 aa	Known RBP	4.59	□□□□□ -1.67
LTO1	YNL260C	VPS9	P54787	451 aa		4.59	□□□□□ -1.67
LTO1	YNL260C	RHO4	Q00246	291 aa		4.59	□□□□□ -1.67
LTO1	YNL260C	MRPL1	Q04599	285 aa		4.59	□□□□□ -1.67
LTO1	YNL260C	GLO2	Q05584	274 aa		4.59	□□□□□ -1.67
LTO1	YNL260C	RPS2	P25443	254 aa	Known RBP	4.58	□□□□□ -1.68
LTO1	YNL260C	ARA1	P38115	344 aa		4.58	□□□□□ -1.68
LTO1	YNL260C	RTS2	P40962	232 aa		4.58	□□□□□ -1.68
LTO1	YNL260C	LCB2	P40970	561 aa		4.58	□□□□□ -1.68
LTO1	YNL260C	VMA13	P41807	478 aa	Known RBP	4.58	□□□□□ -1.68
LTO1	YNL260C	MDV1	P47025	714 aa		4.58	□□□□□ -1.68
LTO1	YNL260C	BNA3	P47039	444 aa	Known RBP	4.58	□□□□□ -1.68
LTO1	YNL260C	YJL055W	P47044	245 aa		4.58	□□□□□ -1.68
LTO1	YNL260C	YJR154W	P47181	346 aa		4.58	□□□□□ -1.68
LTO1	YNL260C	COS5	P47187	383 aa		4.58	□□□□□ -1.68
LTO1	YNL260C	RMD9	P53140	646 aa	Known RBP	4.58	□□□□□ -1.68
LTO1	YNL260C	ESBP6	P53918	673 aa		4.58	□□□□□ -1.68
LTO1	YNL260C	OAZ1	Q02803	292 aa		4.58	□□□□□ -1.68
LTO1	YNL260C	COS7	Q07788	383 aa		4.58	□□□□□ -1.68
LTO1	YNL260C	VPS54	Q12071	889 aa		4.58	□□□□□ -1.68
LTO1	YNL260C	PAR32	Q12515	295 aa	Known RBP	4.58	□□□□□ -1.68
LTO1	YNL260C	CTF3	Q12748	733 aa		4.58	□□□□□ -1.68
LTO1	YNL260C	BAR1	P12630	587 aa		4.57	□□□□□ -1.68
LTO1	YNL260C	MDM10	P18409	493 aa		4.57	□□□□□ -1.68
LTO1	YNL260C	TYR1	P20049	452 aa		4.57	□□□□□ -1.68
LTO1	YNL260C	ECM32	P32644	1121 aa	Known RBP	4.57	□□□□□ -1.68
LTO1	YNL260C	MDL1	P33310	695 aa		4.57	□□□□□ -1.68
LTO1	YNL260C	KEL1	P38853	1164 aa	Known RBP	4.57	□□□□□ -1.68
LTO1	YNL260C	GDI1	P39958	451 aa	Known RBP	4.57	□□□□□ -1.68
LTO1	YNL260C	URB2	P47108	1174 aa		4.57	□□□□□ -1.68
LTO1	YNL260C	ALT2	P52892	507 aa		4.57	□□□□□ -1.68
LTO1	YNL260C	SLG1	P54867	378 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms