RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	YNL144C	P53907	740 aa		3.68	□□□□□ -1.82
TPM1	YNL079C	YSA1	Q01976	231 aa		3.68	□□□□□ -1.82
TPM1	YNL079C	RAD30	Q04049	632 aa		3.68	□□□□□ -1.82
TPM1	YNL079C	YKU80	Q04437	629 aa		3.68	□□□□□ -1.82
TPM1	YNL079C	AIM33	Q04516	312 aa		3.68	□□□□□ -1.82
TPM1	YNL079C	COG4	Q06096	861 aa		3.68	□□□□□ -1.82
TPM1	YNL079C	YLH47	Q06493	454 aa		3.68	□□□□□ -1.82
TPM1	YNL079C	YAP7	Q08182	245 aa		3.68	□□□□□ -1.82
TPM1	YNL079C	YOL075C	Q08234	1294 aa		3.68	□□□□□ -1.82
TPM1	YNL079C	ATX2	Q12067	313 aa		3.68	□□□□□ -1.82
TPM1	YNL079C	ILV1	P00927	576 aa	Known RBP	3.67	□□□□□ -1.82
TPM1	YNL079C	RAP1	P11938	827 aa		3.67	□□□□□ -1.82
TPM1	YNL079C	KRS1	P15180	591 aa	Known RBP	3.67	□□□□□ -1.82
TPM1	YNL079C	OM45	P16547	393 aa		3.67	□□□□□ -1.82
TPM1	YNL079C	PET123	P17558	318 aa		3.67	□□□□□ -1.82
TPM1	YNL079C	AIM17	P23180	465 aa	Known RBP	3.67	□□□□□ -1.82
TPM1	YNL079C	SAC1	P32368	623 aa	Known RBP	3.67	□□□□□ -1.82
TPM1	YNL079C	RPC25	P35718	212 aa		3.67	□□□□□ -1.82
TPM1	YNL079C	EFM2	P38347	419 aa		3.67	□□□□□ -1.82
TPM1	YNL079C	NDT80	P38830	627 aa		3.67	□□□□□ -1.82
TPM1	YNL079C	YMR124W	P39523	943 aa	Known RBP	3.67	□□□□□ -1.82
TPM1	YNL079C	PKP1	P40530	394 aa		3.67	□□□□□ -1.82
TPM1	YNL079C	DPB11	P47027	764 aa	Predicted RBP	3.67	□□□□□ -1.82
TPM1	YNL079C	SUB1	P54000	292 aa	Known RBP	3.67	□□□□□ -1.82
TPM1	YNL079C	VPS60	Q03390	229 aa		3.67	□□□□□ -1.82
TPM1	YNL079C	FUS2	Q05670	677 aa		3.67	□□□□□ -1.82
TPM1	YNL079C	VPS38	Q05919	439 aa		3.67	□□□□□ -1.82
TPM1	YNL079C	ATG9	Q12142	997 aa		3.67	□□□□□ -1.82
TPM1	YNL079C	SFI1	Q12369	946 aa		3.67	□□□□□ -1.82
TPM1	YNL079C	YLR278C	Q05854	1341 aa		3.67	□□□□□ -1.82
TPM1	YNL079C	GSC2	P40989	1895 aa		3.67	□□□□□ -1.82
TPM1	YNL079C	YCP4	P25349	247 aa	Known RBP	3.66	□□□□□ -1.82
TPM1	YNL079C	GFD2	P25370	566 aa	Known RBP	3.66	□□□□□ -1.82
TPM1	YNL079C	PDB1	P32473	366 aa	Known RBP	3.66	□□□□□ -1.82
TPM1	YNL079C	PAH1	P32567	862 aa		3.66	□□□□□ -1.82
TPM1	YNL079C	SWE1	P32944	819 aa		3.66	□□□□□ -1.82
TPM1	YNL079C	PHO88	P38264	188 aa	Predicted RBP	3.66	□□□□□ -1.82
TPM1	YNL079C	SIP3	P38717	1229 aa		3.66	□□□□□ -1.82
TPM1	YNL079C	TCD1	P38756	429 aa		3.66	□□□□□ -1.82
TPM1	YNL079C	CAJ1	P39101	391 aa		3.66	□□□□□ -1.82
TPM1	YNL079C	UIP3	P39547	235 aa		3.66	□□□□□ -1.82
TPM1	YNL079C	SEC9	P40357	651 aa		3.66	□□□□□ -1.82
TPM1	YNL079C	APT1	P49435	187 aa	Known RBP	3.66	□□□□□ -1.82
TPM1	YNL079C	CAF130	P53280	1122 aa	Predicted RBP	3.66	□□□□□ -1.82
TPM1	YNL079C	PGA2	P53903	129 aa		3.66	□□□□□ -1.82
TPM1	YNL079C	CAC2	Q04199	468 aa		3.66	□□□□□ -1.82
TPM1	YNL079C	MRPL1	Q04599	285 aa		3.66	□□□□□ -1.82
TPM1	YNL079C	YLR287C	Q05881	355 aa		3.66	□□□□□ -1.82
TPM1	YNL079C	POS5	Q06892	414 aa		3.66	□□□□□ -1.82
TPM1	YNL079C	YOL159C	Q08300	171 aa		3.66	□□□□□ -1.82
TPM1	YNL079C	GEP3	Q08622	556 aa		3.66	□□□□□ -1.82
TPM1	YNL079C	HER1	Q12276	1246 aa		3.66	□□□□□ -1.82
TPM1	YNL079C	ARP6	Q12509	438 aa		3.66	□□□□□ -1.82
TPM1	YNL079C	CSR2	Q12734	1121 aa		3.66	□□□□□ -1.82
TPM1	YNL079C	SPO12	P17123	173 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	CLB2	P24869	491 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	RPC53	P25441	422 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	CDC60	P26637	1090 aa	Known RBP	3.65	□□□□□ -1.83
TPM1	YNL079C	SCO2	P38072	301 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	DIA4	P38705	446 aa	Predicted RBP	3.65	□□□□□ -1.83
TPM1	YNL079C	SPC97	P38863	823 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	NOP16	P40007	231 aa	Known RBP	3.65	□□□□□ -1.83
TPM1	YNL079C	BUR6	P40096	142 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	SHQ1	P40486	507 aa	Predicted RBP	3.65	□□□□□ -1.83
TPM1	YNL079C	TOS3	P43637	560 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	SMC3	P47037	1230 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	VPS25	P47142	202 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	GLO1	P50107	326 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	LIF1	P53150	421 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	YTP1	P53584	459 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	SEC5	P89102	971 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	YML037C	Q03703	340 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	SML1	Q04964	104 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	PSR1	Q07800	427 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	TCO89	Q08921	799 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	PLP2	Q12017	286 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	INP53	Q12271	1107 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	RGT2	Q12300	763 aa		3.65	□□□□□ -1.83
TPM1	YNL079C	SEM1	O94742	89 aa		3.64	□□□□□ -1.83
TPM1	YNL079C	PWP1	P21304	576 aa	Known RBP	3.64	□□□□□ -1.83
TPM1	YNL079C	SAN1	P22470	610 aa		3.64	□□□□□ -1.83
TPM1	YNL079C	LTV1	P34078	463 aa		3.64	□□□□□ -1.83
TPM1	YNL079C	ASK1	P35734	292 aa		3.64	□□□□□ -1.83
TPM1	YNL079C	SNU114	P36048	1008 aa	Known RBP	3.64	□□□□□ -1.83
TPM1	YNL079C	LEU5	P38702	357 aa		3.64	□□□□□ -1.83
TPM1	YNL079C	GND1	P38720	489 aa	Known RBP	3.64	□□□□□ -1.83
TPM1	YNL079C	SMC2	P38989	1170 aa	Known RBP	3.64	□□□□□ -1.83
TPM1	YNL079C	TMA108	P40462	946 aa		3.64	□□□□□ -1.83
TPM1	YNL079C	EFM4	P40516	257 aa		3.64	□□□□□ -1.83
TPM1	YNL079C	GPD2	P41911	440 aa	Known RBP	3.64	□□□□□ -1.83
TPM1	YNL079C	UPF3	P48412	387 aa	Known RBP	3.64	□□□□□ -1.83
TPM1	YNL079C	NBP1	P52919	319 aa	Predicted RBP	3.64	□□□□□ -1.83
TPM1	YNL079C	VID30	P53076	958 aa		3.64	□□□□□ -1.83
TPM1	YNL079C	NNF2	P53253	936 aa		3.64	□□□□□ -1.83
TPM1	YNL079C	SCW4	P53334	386 aa	Known RBP	3.64	□□□□□ -1.83
TPM1	YNL079C	BOP3	P53958	396 aa		3.64	□□□□□ -1.83
TPM1	YNL079C	TMA64	Q04600	565 aa	Known RBP	3.64	□□□□□ -1.83
TPM1	YNL079C	SPH1	Q06160	661 aa		3.64	□□□□□ -1.83
TPM1	YNL079C	YDL057W	Q07379	328 aa		3.64	□□□□□ -1.83
TPM1	YNL079C	YLR112W	Q12130	139 aa		3.64	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms