RNA–Protein interactions for RNA: YNL042W

BOP3, Transcript of Protein of unknown function, yeast

Gene BOP3, Length 1,191 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BOP3	YNL042W	UTP18	P40362	594 aa	Predicted RBP	11.15	□□□□□ -0.62
BOP3	YNL042W	NUP85	P46673	744 aa		11.15	□□□□□ -0.62
BOP3	YNL042W	BUD13	P46947	266 aa	Predicted RBP	11.15	□□□□□ -0.62
BOP3	YNL042W	AIM23	P47015	356 aa		11.15	□□□□□ -0.62
BOP3	YNL042W	BIR1	P47134	954 aa		11.15	□□□□□ -0.62
BOP3	YNL042W	SAP4	P53036	818 aa		11.15	□□□□□ -0.62
BOP3	YNL042W	TWF1	P53250	332 aa		11.15	□□□□□ -0.62
BOP3	YNL042W	BRE5	P53741	515 aa	Known RBP	11.15	□□□□□ -0.62
BOP3	YNL042W	COG5	P53951	403 aa		11.15	□□□□□ -0.62
BOP3	YNL042W	MUS81	Q04149	632 aa	Predicted RBP	11.15	□□□□□ -0.62
BOP3	YNL042W	YDR124W	Q04608	324 aa		11.15	□□□□□ -0.62
BOP3	YNL042W	MDM36	Q06820	579 aa		11.15	□□□□□ -0.62
BOP3	YNL042W	BRE4	Q07660	1125 aa		11.15	□□□□□ -0.62
BOP3	YNL042W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	11.15	□□□□□ -0.62	not detected
BOP3	YNL042W	MDM12	Q92328	271 aa		11.15	□□□□□ -0.62
BOP3	YNL042W	HMG2	P12684	1045 aa		11.14	□□□□□ -0.63
BOP3	YNL042W	YAP1	P19880	650 aa	Known RBP	11.14	□□□□□ -0.63
BOP3	YNL042W	DCC1	P25559	380 aa		11.14	□□□□□ -0.63
BOP3	YNL042W	BIO2	P32451	375 aa		11.14	□□□□□ -0.63
BOP3	YNL042W	PRP19	P32523	503 aa	Known RBP	11.14	□□□□□ -0.63
BOP3	YNL042W	SCD5	P34758	872 aa		11.14	□□□□□ -0.63
BOP3	YNL042W	IPT1	P38954	527 aa		11.14	□□□□□ -0.63
BOP3	YNL042W	SOP4	P39543	234 aa	Predicted RBP	11.14	□□□□□ -0.63
BOP3	YNL042W	AST2	P39945	430 aa	Known RBP	11.14	□□□□□ -0.63
BOP3	YNL042W	ALG8	P40351	577 aa		11.14	□□□□□ -0.63
BOP3	YNL042W	PTR3	P43606	678 aa		11.14	□□□□□ -0.63
BOP3	YNL042W	GSF2	Q04697	403 aa	Known RBP	11.14	□□□□□ -0.63
BOP3	YNL042W	YLL007C	Q07799	665 aa		11.14	□□□□□ -0.63
BOP3	YNL042W	PKH2	Q12236	1081 aa	Known RBP	11.14	□□□□□ -0.63
BOP3	YNL042W	MAM3	Q12296	706 aa		11.14	□□□□□ -0.63
BOP3	YNL042W	DCP1	Q12517	231 aa	Predicted RBP	11.14	□□□□□ -0.63
BOP3	YNL042W	RAS2	P01120	322 aa	Known RBP	11.13	□□□□□ -0.63
BOP3	YNL042W	OCA4	P25366	362 aa		11.13	□□□□□ -0.63
BOP3	YNL042W	RIB1	P38066	345 aa		11.13	□□□□□ -0.63
BOP3	YNL042W	YBR056W	P38081	501 aa		11.13	□□□□□ -0.63
BOP3	YNL042W	YHR078W	P38799	552 aa		11.13	□□□□□ -0.63
BOP3	YNL042W	TOM22	P49334	152 aa		11.13	□□□□□ -0.63
BOP3	YNL042W	PEX10	Q05568	337 aa		11.13	□□□□□ -0.63
BOP3	YNL042W	ECM22	Q05958	814 aa	Predicted RBP	11.13	□□□□□ -0.63
BOP3	YNL042W	NUT2	Q06213	157 aa		11.13	□□□□□ -0.63
BOP3	YNL042W	MFG1	Q07684	458 aa		11.13	□□□□□ -0.63
BOP3	YNL042W	GLE1	Q12315	538 aa		11.13	□□□□□ -0.63
BOP3	YNL042W	TIM9	O74700	87 aa		11.12	□□□□□ -0.63
BOP3	YNL042W	RPL6B	P05739	176 aa	Known RBP	11.12	□□□□□ -0.63
BOP3	YNL042W	SPT3	P06844	337 aa		11.12	□□□□□ -0.63
BOP3	YNL042W	KGD1	P20967	1014 aa	Known RBP	11.12	□□□□□ -0.63
BOP3	YNL042W	STB6	P36085	766 aa		11.12	□□□□□ -0.63
BOP3	YNL042W	RSP5	P39940	809 aa	Known RBP	11.12	□□□□□ -0.63
BOP3	YNL042W	GAB1	P41733	394 aa		11.12	□□□□□ -0.63
BOP3	YNL042W	REF2	P42073	533 aa	Predicted RBP	11.12	□□□□□ -0.63
BOP3	YNL042W	IRC6	P43615	237 aa		11.12	□□□□□ -0.63
BOP3	YNL042W	ATP22	P50273	684 aa	Predicted RBP	11.12	□□□□□ -0.63
BOP3	YNL042W	YPT32	P51996	222 aa	Known RBP	11.12	□□□□□ -0.63
BOP3	YNL042W	CAF120	P53836	1060 aa		11.12	□□□□□ -0.63
BOP3	YNL042W	NOP12	Q08208	459 aa	Known RBP	11.12	□□□□□ -0.63
BOP3	YNL042W	THP1	Q08231	455 aa		11.12	□□□□□ -0.63
BOP3	YNL042W	HRK1	Q08732	759 aa	Known RBP	11.12	□□□□□ -0.63
BOP3	YNL042W	THP3	Q12049	470 aa	Known RBP	11.12	□□□□□ -0.63
BOP3	YNL042W	WTM1	Q12363	437 aa	Known RBP	11.12	□□□□□ -0.63
BOP3	YNL042W	YLR149C	Q99296	730 aa		11.12	□□□□□ -0.63
BOP3	YNL042W	FRT1	Q99332	602 aa		11.12	□□□□□ -0.63
BOP3	YNL042W	PUT2	P07275	575 aa		11.11	□□□□□ -0.63
BOP3	YNL042W	HVG1	P0CE11	249 aa		11.11	□□□□□ -0.63
BOP3	YNL042W	NFT1	P0CE68	1218 aa		11.11	□□□□□ -0.63
BOP3	YNL042W	KGD2	P19262	463 aa	Predicted RBP	11.11	□□□□□ -0.63
BOP3	YNL042W	GRR1	P24814	1151 aa		11.11	□□□□□ -0.63
BOP3	YNL042W	AAR2	P32357	355 aa	Predicted RBP	11.11	□□□□□ -0.63
BOP3	YNL042W	VPS21	P36017	210 aa	Known RBP	11.11	□□□□□ -0.63
BOP3	YNL042W	FMP23	P38231	175 aa		11.11	□□□□□ -0.63
BOP3	YNL042W	ERV46	P39727	415 aa		11.11	□□□□□ -0.63
BOP3	YNL042W	TPA1	P40032	644 aa	Known RBP	11.11	□□□□□ -0.63
BOP3	YNL042W	GYP8	P43570	497 aa		11.11	□□□□□ -0.63
BOP3	YNL042W	BST1	P43571	1029 aa		11.11	□□□□□ -0.63
BOP3	YNL042W	RMD8	P43620	662 aa		11.11	□□□□□ -0.63
BOP3	YNL042W	RAI1	P53063	387 aa	Known RBP	11.11	□□□□□ -0.63
BOP3	YNL042W	NEJ1	Q06148	342 aa		11.11	□□□□□ -0.63
BOP3	YNL042W	DBP9	Q06218	594 aa	Known RBP	11.11	□□□□□ -0.63
BOP3	YNL042W	NGL1	Q08213	363 aa	Known RBP	11.11	□□□□□ -0.63
BOP3	YNL042W	LCB4	Q12246	624 aa		11.11	□□□□□ -0.63
BOP3	YNL042W	YOR131C	Q12486	218 aa		11.11	□□□□□ -0.63
BOP3	YNL042W	LDB19	Q12502	818 aa		11.11	□□□□□ -0.63
BOP3	YNL042W	TIF6	Q12522	245 aa	Known RBP	11.11	□□□□□ -0.63
BOP3	YNL042W	ATP1	P07251	545 aa	Known RBP	11.1	□□□□□ -0.63
BOP3	YNL042W	ENA1	P13587	1091 aa		11.1	□□□□□ -0.63
BOP3	YNL042W	SBA1	P28707	216 aa	Known RBP	11.1	□□□□□ -0.63
BOP3	YNL042W	APE3	P37302	537 aa	Known RBP	11.1	□□□□□ -0.63
BOP3	YNL042W	ECM13	P38195	257 aa		11.1	□□□□□ -0.63
BOP3	YNL042W	LDB7	P38210	180 aa		11.1	□□□□□ -0.63
BOP3	YNL042W	YER034W	P40022	185 aa	Known RBP	11.1	□□□□□ -0.63
BOP3	YNL042W	FCY21	P40039	528 aa		11.1	□□□□□ -0.63
BOP3	YNL042W	GPI8	P49018	411 aa		11.1	□□□□□ -0.63
BOP3	YNL042W	DAM1	P53267	343 aa		11.1	□□□□□ -0.63
BOP3	YNL042W	IDP3	P53982	420 aa	Known RBP	11.1	□□□□□ -0.63
BOP3	YNL042W	ENA2	Q01896	1091 aa		11.1	□□□□□ -0.63
BOP3	YNL042W	RRN5	Q02983	363 aa		11.1	□□□□□ -0.63
BOP3	YNL042W	MCP2	Q06567	569 aa		11.1	□□□□□ -0.63
BOP3	YNL042W	UPC2	Q12151	913 aa		11.1	□□□□□ -0.63
BOP3	YNL042W	ENA5	Q12691	1091 aa		11.1	□□□□□ -0.63
BOP3	YNL042W	TY4B-P	A0A0B7P3V8	1104 aa		11.09	□□□□□ -0.63
BOP3	YNL042W	SPS1	P08458	490 aa		11.09	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms