RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDP1	YNL039W	ATG27	P46989	271 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	ECM30	Q06673	1274 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	THI3	Q07471	609 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	CYK3	Q07533	885 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	RPS10A	Q08745	105 aa	Predicted RBP	4.63	□□□□□ -1.67
BDP1	YNL039W	MRH1	Q12117	320 aa	Predicted RBP	4.63	□□□□□ -1.67
BDP1	YNL039W	RPL7B	Q12213	244 aa	Known RBP	4.63	□□□□□ -1.67
BDP1	YNL039W	VAM3	Q12241	283 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	NIP1	P32497	812 aa	Known RBP	4.63	□□□□□ -1.67
BDP1	YNL039W	RIB7	P33312	244 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	SRB2	P34162	210 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	PFF1	P38244	976 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	MMS4	P38257	691 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	ANS1	P38832	159 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	FAD1	P38913	306 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	MBB1	P39534	108 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	YGL108C	P53139	140 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	RSM23	Q01163	450 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	PFA5	Q03289	374 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	DCS1	Q06151	350 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	HBT1	Q07653	1046 aa	Known RBP	4.63	□□□□□ -1.67
BDP1	YNL039W	NBL1	Q3E7Y6	73 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	MTR10	Q99189	972 aa		4.63	□□□□□ -1.67
BDP1	YNL039W	YMR084W	A2P2R3	262 aa		4.62	□□□□□ -1.67
BDP1	YNL039W	GPH1	P06738	902 aa	Known RBP	4.62	□□□□□ -1.67
BDP1	YNL039W	PMA2	P19657	947 aa		4.62	□□□□□ -1.67
BDP1	YNL039W	TKL1	P23254	680 aa	Known RBP	4.62	□□□□□ -1.67
BDP1	YNL039W	MCM4	P30665	933 aa	Known RBP	4.62	□□□□□ -1.67
BDP1	YNL039W	SSE1	P32589	693 aa	Known RBP	4.62	□□□□□ -1.67
BDP1	YNL039W	ZTA1	P38230	334 aa	Known RBP	4.62	□□□□□ -1.67
BDP1	YNL039W	VHS2	P40463	436 aa		4.62	□□□□□ -1.67
BDP1	YNL039W	RPS10B	P46784	105 aa	Known RBP	4.62	□□□□□ -1.67
BDP1	YNL039W	AQR1	P53943	586 aa		4.62	□□□□□ -1.67
BDP1	YNL039W	SLG1	P54867	378 aa		4.62	□□□□□ -1.67
BDP1	YNL039W	YLR455W	Q06188	304 aa		4.62	□□□□□ -1.67
BDP1	YNL039W	YFH1	Q07540	174 aa		4.62	□□□□□ -1.67
BDP1	YNL039W	RHO2	P06781	192 aa		4.61	□□□□□ -1.67
BDP1	YNL039W	CBP1	P07252	654 aa		4.61	□□□□□ -1.67
BDP1	YNL039W	COR1	P07256	457 aa		4.61	□□□□□ -1.67
BDP1	YNL039W	TAL1	P15019	335 aa	Known RBP	4.61	□□□□□ -1.67
BDP1	YNL039W	FAA1	P30624	700 aa	Known RBP	4.61	□□□□□ -1.67
BDP1	YNL039W	SAC1	P32368	623 aa	Known RBP	4.61	□□□□□ -1.67
BDP1	YNL039W	HIR2	P32480	875 aa		4.61	□□□□□ -1.67
BDP1	YNL039W	PPQ1	P32945	549 aa		4.61	□□□□□ -1.67
BDP1	YNL039W	RRP1	P35178	278 aa	Predicted RBP	4.61	□□□□□ -1.67
BDP1	YNL039W	YDR089W	P38966	869 aa		4.61	□□□□□ -1.67
BDP1	YNL039W	YFR016C	P43597	1233 aa	Known RBP	4.61	□□□□□ -1.67
BDP1	YNL039W	ALK1	P43633	760 aa	Known RBP	4.61	□□□□□ -1.67
BDP1	YNL039W	YGR126W	P53274	230 aa		4.61	□□□□□ -1.67
BDP1	YNL039W	YMR111C	Q04461	462 aa	Predicted RBP	4.61	□□□□□ -1.67
BDP1	YNL039W	YLR049C	Q12110	428 aa		4.61	□□□□□ -1.67
BDP1	YNL039W	PUT2	P07275	575 aa		4.6	□□□□□ -1.67
BDP1	YNL039W	PHO91	P27514	894 aa		4.6	□□□□□ -1.67
BDP1	YNL039W	CRM1	P30822	1084 aa	Known RBP	4.6	□□□□□ -1.67
BDP1	YNL039W	MTR2	P34232	184 aa	Known RBP	4.6	□□□□□ -1.67
BDP1	YNL039W	PXL1	P36166	706 aa		4.6	□□□□□ -1.67
BDP1	YNL039W	EXO1	P39875	702 aa		4.6	□□□□□ -1.67
BDP1	YNL039W	ASN1	P49089	572 aa	Known RBP	4.6	□□□□□ -1.67
BDP1	YNL039W	YNL143C	P53908	130 aa		4.6	□□□□□ -1.67
BDP1	YNL039W	VTC3	Q02725	835 aa		4.6	□□□□□ -1.67
BDP1	YNL039W	RBA50	Q04418	439 aa		4.6	□□□□□ -1.67
BDP1	YNL039W	DIS3	Q08162	1001 aa	Known RBP	4.6	□□□□□ -1.67
BDP1	YNL039W	RAV1	P47104	1357 aa		4.6	□□□□□ -1.67
BDP1	YNL039W	CAR1	P00812	333 aa	Known RBP	4.6	□□□□□ -1.67
BDP1	YNL039W	ADE5,7	P07244	802 aa	Known RBP	4.6	□□□□□ -1.67
BDP1	YNL039W	UBA1	P22515	1024 aa	Known RBP	4.6	□□□□□ -1.67
BDP1	YNL039W	PMI40	P29952	429 aa	Known RBP	4.6	□□□□□ -1.67
BDP1	YNL039W	MIA40	P36046	403 aa		4.6	□□□□□ -1.67
BDP1	YNL039W	ULP2	P40537	1034 aa	Predicted RBP	4.6	□□□□□ -1.67
BDP1	YNL039W	CDC1	P40986	491 aa		4.6	□□□□□ -1.67
BDP1	YNL039W	EFM3	P47163	339 aa		4.6	□□□□□ -1.67
BDP1	YNL039W	YTP1	P53584	459 aa		4.6	□□□□□ -1.67
BDP1	YNL039W	COP1	P53622	1201 aa	Known RBP	4.6	□□□□□ -1.67
BDP1	YNL039W	ARP5	P53946	755 aa		4.6	□□□□□ -1.67
BDP1	YNL039W	YDL057W	Q07379	328 aa		4.6	□□□□□ -1.67
BDP1	YNL039W	NCE102	Q12207	173 aa	RIP-Chip data	4.6	□□□□□ -1.67	not detected
BDP1	YNL039W	SEC3	P33332	1336 aa	Known RBP	4.6	□□□□□ -1.67
BDP1	YNL039W	PDE2	P06776	526 aa		4.59	□□□□□ -1.67
BDP1	YNL039W	PEP4	P07267	405 aa	Known RBP	4.59	□□□□□ -1.67
BDP1	YNL039W	ARO3	P14843	370 aa	Known RBP	4.59	□□□□□ -1.67
BDP1	YNL039W	OM45	P16547	393 aa		4.59	□□□□□ -1.67
BDP1	YNL039W	DBP3	P20447	523 aa	Known RBP	4.59	□□□□□ -1.67
BDP1	YNL039W	CLB2	P24869	491 aa		4.59	□□□□□ -1.67
BDP1	YNL039W	GEX1	P25596	615 aa		4.59	□□□□□ -1.67
BDP1	YNL039W	CTS1	P29029	562 aa		4.59	□□□□□ -1.67
BDP1	YNL039W	SHP1	P34223	423 aa		4.59	□□□□□ -1.67
BDP1	YNL039W	EBP2	P36049	427 aa	Known RBP	4.59	□□□□□ -1.67
BDP1	YNL039W	ASC1	P38011	319 aa	Known RBP	4.59	□□□□□ -1.67
BDP1	YNL039W	HEF3	P53978	1044 aa	Known RBP	4.59	□□□□□ -1.67
BDP1	YNL039W	YMR206W	Q03695	313 aa		4.59	□□□□□ -1.67
BDP1	YNL039W	YOR389W	Q08912	624 aa		4.59	□□□□□ -1.67
BDP1	YNL039W	RIP1	P08067	215 aa		4.58	□□□□□ -1.68
BDP1	YNL039W	GRR1	P24814	1151 aa		4.58	□□□□□ -1.68
BDP1	YNL039W	KRE2	P27809	442 aa		4.58	□□□□□ -1.68
BDP1	YNL039W	NDI1	P32340	513 aa		4.58	□□□□□ -1.68
BDP1	YNL039W	EMP70	P32802	667 aa		4.58	□□□□□ -1.68
BDP1	YNL039W	VHC1	P38329	1120 aa		4.58	□□□□□ -1.68
BDP1	YNL039W	ARP1	P38696	384 aa		4.58	□□□□□ -1.68
BDP1	YNL039W	ELP2	P42935	788 aa		4.58	□□□□□ -1.68
BDP1	YNL039W	OCA2	P53949	197 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms