RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C CLN2P20438 545 aa3.43□□□□□ -1.86
SHH3YMR118C VPS33P20795 691 aa3.43□□□□□ -1.86
SHH3YMR118C NPR1P22211 790 aa3.43□□□□□ -1.86
SHH3YMR118C TKL1P23254 680 aaKnown RBP3.43□□□□□ -1.86
SHH3YMR118C DBR1P24309 405 aaKnown RBP3.43□□□□□ -1.86
SHH3YMR118C PUP3P25451 205 aaKnown RBP3.43□□□□□ -1.86
SHH3YMR118C PER1P25625 357 aa3.43□□□□□ -1.86
SHH3YMR118C PEX3P28795 441 aa3.43□□□□□ -1.86
SHH3YMR118C RME1P32338 300 aaKnown RBP3.43□□□□□ -1.86
SHH3YMR118C HIR2P32480 875 aa3.43□□□□□ -1.86
SHH3YMR118C UTR4P32626 227 aa3.43□□□□□ -1.86
SHH3YMR118C RPS0AP32905 252 aaKnown RBP3.43□□□□□ -1.86
SHH3YMR118C YKL100CP34248 587 aa3.43□□□□□ -1.86
SHH3YMR118C TSA1P34760 196 aaKnown RBP3.43□□□□□ -1.86
SHH3YMR118C UTP30P36144 274 aaKnown RBP3.43□□□□□ -1.86
SHH3YMR118C ROT2P38138 954 aa3.43□□□□□ -1.86
SHH3YMR118C REG2P38232 338 aa3.43□□□□□ -1.86
SHH3YMR118C BIT2P38346 545 aa3.43□□□□□ -1.86
SHH3YMR118C SRP68P38687 599 aaKnown RBP3.43□□□□□ -1.86
SHH3YMR118C PPE1P38796 400 aa3.43□□□□□ -1.86
SHH3YMR118C NMD3P38861 518 aaKnown RBP3.43□□□□□ -1.86
SHH3YMR118C GIP4P39732 760 aa3.43□□□□□ -1.86
SHH3YMR118C YEN1P40028 759 aa3.43□□□□□ -1.86
SHH3YMR118C COS4P43542 379 aa3.43□□□□□ -1.86
SHH3YMR118C FAR7P43592 221 aa3.43□□□□□ -1.86
SHH3YMR118C AIM23P47015 356 aa3.43□□□□□ -1.86
SHH3YMR118C MPS3P47069 682 aa3.43□□□□□ -1.86
SHH3YMR118C KEL2P50090 882 aa3.43□□□□□ -1.86
SHH3YMR118C CWC23P52868 283 aaPredicted RBP3.43□□□□□ -1.86
SHH3YMR118C SAP4P53036 818 aa3.43□□□□□ -1.86
SHH3YMR118C ARO8P53090 500 aaKnown RBP3.43□□□□□ -1.86
SHH3YMR118C CLD1P53264 445 aa3.43□□□□□ -1.86
SHH3YMR118C GTR2P53290 341 aa3.43□□□□□ -1.86
SHH3YMR118C PRP38Q00723 242 aaPredicted RBP3.43□□□□□ -1.86
SHH3YMR118C MRPL13Q02204 264 aa3.43□□□□□ -1.86
SHH3YMR118C TRM44Q02648 567 aaKnown RBP3.43□□□□□ -1.86
SHH3YMR118C RMI1Q02685 241 aa3.43□□□□□ -1.86
SHH3YMR118C YPL107WQ02873 248 aa3.43□□□□□ -1.86
SHH3YMR118C INA17Q02888 182 aa3.43□□□□□ -1.86
SHH3YMR118C NOG1Q02892 647 aaKnown RBP3.43□□□□□ -1.86
SHH3YMR118C SSY1Q03770 852 aa3.43□□□□□ -1.86
SHH3YMR118C PPN1Q04119 674 aa3.43□□□□□ -1.86
SHH3YMR118C APC4Q04601 652 aa3.43□□□□□ -1.86
SHH3YMR118C BCH1Q05029 724 aa3.43□□□□□ -1.86
SHH3YMR118C ECM38Q05902 660 aaPredicted RBP3.43□□□□□ -1.86
SHH3YMR118C GPI11Q06636 219 aa3.43□□□□□ -1.86
SHH3YMR118C UBX5Q06682 500 aa3.43□□□□□ -1.86
SHH3YMR118C YLR413WQ06689 675 aa3.43□□□□□ -1.86
SHH3YMR118C YDL073WQ07454 984 aa3.43□□□□□ -1.86
SHH3YMR118C YDL121CQ07541 149 aa3.43□□□□□ -1.86
SHH3YMR118C SLD7Q08457 257 aa3.43□□□□□ -1.86
SHH3YMR118C ALG6Q12001 544 aaKnown RBP3.43□□□□□ -1.86
SHH3YMR118C MDY2Q12285 212 aa3.43□□□□□ -1.86
SHH3YMR118C ZPS1Q12512 249 aa3.43□□□□□ -1.86
SHH3YMR118C YBL113CQ7M4S9 792 aa3.43□□□□□ -1.86
SHH3YMR118C SUC2P00724 532 aa3.42□□□□□ -1.86
SHH3YMR118C CHS1P08004 1131 aa3.42□□□□□ -1.86
SHH3YMR118C ENA1P13587 1091 aa3.42□□□□□ -1.86
SHH3YMR118C NSP1P14907 823 aaKnown RBP3.42□□□□□ -1.86
SHH3YMR118C SEN2P16658 377 aa3.42□□□□□ -1.86
SHH3YMR118C HPR1P17629 752 aaKnown RBP3.42□□□□□ -1.86
SHH3YMR118C ACO1P19414 778 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
SHH3YMR118C RPB4P20433 221 aaPredicted RBP3.42□□□□□ -1.86
SHH3YMR118C DBF2P22204 572 aa3.42□□□□□ -1.86
SHH3YMR118C MSM1P22438 575 aa3.42□□□□□ -1.86
SHH3YMR118C TRX2P22803 104 aaKnown RBP3.42□□□□□ -1.86
SHH3YMR118C YSP3P25036 478 aa3.42□□□□□ -1.86
SHH3YMR118C PTC6P25646 442 aa3.42□□□□□ -1.86
SHH3YMR118C BUB2P26448 306 aaPredicted RBP3.42□□□□□ -1.86
SHH3YMR118C PPZ1P26570 692 aa3.42□□□□□ -1.86
SHH3YMR118C PRR1P28708 518 aa3.42□□□□□ -1.86
SHH3YMR118C SYN8P31377 255 aa3.42□□□□□ -1.86
SHH3YMR118C NTG1P31378 399 aa3.42□□□□□ -1.86
SHH3YMR118C AIM26P32858 118 aa3.42□□□□□ -1.86
SHH3YMR118C SRP101P32916 621 aa3.42□□□□□ -1.86
SHH3YMR118C KTR4P38131 464 aa3.42□□□□□ -1.86
SHH3YMR118C YBR242WP38331 238 aa3.42□□□□□ -1.86
SHH3YMR118C YLF2P38746 405 aa3.42□□□□□ -1.86
SHH3YMR118C YHR054CP38780 354 aa3.42□□□□□ -1.86
SHH3YMR118C ATG7P38862 630 aa3.42□□□□□ -1.86
SHH3YMR118C IPT1P38954 527 aa3.42□□□□□ -1.86
SHH3YMR118C HXT6P39003 570 aaKnown RBP3.42□□□□□ -1.86
SHH3YMR118C HXT7P39004 570 aa3.42□□□□□ -1.86
SHH3YMR118C MPT5P39016 859 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
SHH3YMR118C MNN1P39106 762 aa3.42□□□□□ -1.86
SHH3YMR118C SER3P40054 469 aa3.42□□□□□ -1.86
SHH3YMR118C COA1P40452 197 aa3.42□□□□□ -1.86
SHH3YMR118C GCD10P41814 478 aa3.42□□□□□ -1.86
SHH3YMR118C FET5P43561 622 aa3.42□□□□□ -1.86
SHH3YMR118C MET12P46151 657 aa3.42□□□□□ -1.86
SHH3YMR118C GUF1P46943 645 aa3.42□□□□□ -1.86
SHH3YMR118C HOC1P47124 396 aa3.42□□□□□ -1.86
SHH3YMR118C ACF4P47129 309 aa3.42□□□□□ -1.86
SHH3YMR118C YJR154WP47181 346 aa3.42□□□□□ -1.86
SHH3YMR118C MTR3P48240 250 aaPredicted RBP3.42□□□□□ -1.86
SHH3YMR118C UPF3P48412 387 aaKnown RBP3.42□□□□□ -1.86
SHH3YMR118C GCV2P49095 1034 aa3.42□□□□□ -1.86
SHH3YMR118C DIE2P50076 525 aa3.42□□□□□ -1.86
SHH3YMR118C PEX31P53203 462 aa3.42□□□□□ -1.86
SHH3YMR118C YGR266WP53326 701 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms