RNA–Protein interactions for RNA: YLR224W

YLR224W, Transcript of F-box protein and component of SCF ubiquitin ligase complexes, yeast

Gene YLR224W, Length 1,110 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR224W	YLR224W	SIP2	P34164	415 aa	Known RBP	2.86	□□□□□ -1.95
YLR224W	YLR224W	SHP1	P34223	423 aa		2.86	□□□□□ -1.95
YLR224W	YLR224W	SRO77	P38163	1010 aa		2.86	□□□□□ -1.95
YLR224W	YLR224W	YBR225W	P38321	900 aa		2.86	□□□□□ -1.95
YLR224W	YLR224W	OSH3	P38713	996 aa	Known RBP	2.86	□□□□□ -1.95
YLR224W	YLR224W	MSR1	P38714	643 aa		2.86	□□□□□ -1.95
YLR224W	YLR224W	MDM31	P38880	579 aa		2.86	□□□□□ -1.95
YLR224W	YLR224W	DHH1	P39517	506 aa	Known RBP	2.86	□□□□□ -1.95
YLR224W	YLR224W	DRN1	P53255	507 aa	Known RBP	2.86	□□□□□ -1.95
YLR224W	YLR224W	RBG2	P53295	368 aa	Known RBP	2.86	□□□□□ -1.95
YLR224W	YLR224W	ARE2	P53629	642 aa	Known RBP	2.86	□□□□□ -1.95
YLR224W	YLR224W	RPM2	Q02773	1202 aa		2.86	□□□□□ -1.95
YLR224W	YLR224W	RTT103	Q05543	409 aa		2.86	□□□□□ -1.95
YLR224W	YLR224W	VPS38	Q05919	439 aa		2.86	□□□□□ -1.95
YLR224W	YLR224W	THP1	Q08231	455 aa		2.86	□□□□□ -1.95
YLR224W	YLR224W	GAL80	P04387	435 aa		2.85	□□□□□ -1.95
YLR224W	YLR224W	RAD52	P06778	471 aa	Known RBP	2.85	□□□□□ -1.95
YLR224W	YLR224W	MTF1	P14908	341 aa	Known RBP	2.85	□□□□□ -1.95
YLR224W	YLR224W	HSC82	P15108	705 aa	Known RBP	2.85	□□□□□ -1.95
YLR224W	YLR224W	NDC1	P32500	655 aa		2.85	□□□□□ -1.95
YLR224W	YLR224W	PTR2	P32901	601 aa		2.85	□□□□□ -1.95
YLR224W	YLR224W	WBP1	P33767	430 aa	Known RBP	2.85	□□□□□ -1.95
YLR224W	YLR224W	BNA4	P38169	460 aa		2.85	□□□□□ -1.95
YLR224W	YLR224W	MUM2	P38236	366 aa		2.85	□□□□□ -1.95
YLR224W	YLR224W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	2.85	□□□□□ -1.95	not detected
YLR224W	YLR224W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.85	□□□□□ -1.95	RIP-Chip
YLR224W	YLR224W	AIM22	P47051	409 aa		2.85	□□□□□ -1.95
YLR224W	YLR224W	TIM10	P87108	93 aa		2.85	□□□□□ -1.95
YLR224W	YLR224W	RPT6	Q01939	405 aa	Known RBP	2.85	□□□□□ -1.95
YLR224W	YLR224W	IVY1	Q04934	453 aa		2.85	□□□□□ -1.95
YLR224W	YLR224W	PPT2	Q12036	173 aa		2.85	□□□□□ -1.95
YLR224W	YLR224W	MED1	Q12321	566 aa		2.85	□□□□□ -1.95
YLR224W	YLR224W	RPL15A	P05748	204 aa	Known RBP	2.84	□□□□□ -1.95
YLR224W	YLR224W	AMD1	P15274	810 aa	Known RBP	2.84	□□□□□ -1.95
YLR224W	YLR224W	ELO2	P25358	347 aa		2.84	□□□□□ -1.95
YLR224W	YLR224W	SWE1	P32944	819 aa		2.84	□□□□□ -1.95
YLR224W	YLR224W	VPS52	P39904	641 aa		2.84	□□□□□ -1.95
YLR224W	YLR224W	NPR2	P39923	615 aa		2.84	□□□□□ -1.95
YLR224W	YLR224W	TIF4631	P39935	952 aa	Known RBP	2.84	□□□□□ -1.95
YLR224W	YLR224W	RTT101	P47050	842 aa		2.84	□□□□□ -1.95
YLR224W	YLR224W	PET130	P47065	347 aa		2.84	□□□□□ -1.95
YLR224W	YLR224W	HEF3	P53978	1044 aa	Known RBP	2.84	□□□□□ -1.95
YLR224W	YLR224W	SLD5	Q03406	294 aa		2.84	□□□□□ -1.95
YLR224W	YLR224W	RPC11	Q04307	110 aa	Predicted RBP	2.84	□□□□□ -1.95
YLR224W	YLR224W	MFB1	Q04922	465 aa		2.84	□□□□□ -1.95
YLR224W	YLR224W	ERP1	Q05359	219 aa	Known RBP	2.84	□□□□□ -1.95
YLR224W	YLR224W	BNA5	Q05979	453 aa		2.84	□□□□□ -1.95
YLR224W	YLR224W	YDL009C	Q12210	107 aa		2.84	□□□□□ -1.95
YLR224W	YLR224W	LSP1	Q12230	341 aa	Known RBP	2.84	□□□□□ -1.95
YLR224W	YLR224W	YBR298C-A	Q8TGK4	73 aa		2.84	□□□□□ -1.95
YLR224W	YLR224W	FOB1	O13329	566 aa		2.83	□□□□□ -1.96
YLR224W	YLR224W	SUC2	P00724	532 aa		2.83	□□□□□ -1.96
YLR224W	YLR224W	MRP7	P12687	371 aa		2.83	□□□□□ -1.96
YLR224W	YLR224W	EXO70	P19658	623 aa		2.83	□□□□□ -1.96
YLR224W	YLR224W	PRP2	P20095	876 aa	Predicted RBP	2.83	□□□□□ -1.96
YLR224W	YLR224W	UTR4	P32626	227 aa		2.83	□□□□□ -1.96
YLR224W	YLR224W	FRE1	P32791	686 aa		2.83	□□□□□ -1.96
YLR224W	YLR224W	MRE11	P32829	692 aa		2.83	□□□□□ -1.96
YLR224W	YLR224W	MSN2	P33748	704 aa		2.83	□□□□□ -1.96
YLR224W	YLR224W	DUG2	P38149	878 aa		2.83	□□□□□ -1.96
YLR224W	YLR224W	TCM62	P38228	572 aa	Known RBP	2.83	□□□□□ -1.96
YLR224W	YLR224W	UTP9	P38882	575 aa	Known RBP	2.83	□□□□□ -1.96
YLR224W	YLR224W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	2.83	□□□□□ -1.96	RIP-Chip
YLR224W	YLR224W	SPO22	P40511	975 aa		2.83	□□□□□ -1.96
YLR224W	YLR224W	DOT5	P40553	215 aa		2.83	□□□□□ -1.96
YLR224W	YLR224W	MET28	P40573	187 aa		2.83	□□□□□ -1.96
YLR224W	YLR224W	VPS72	Q03388	795 aa		2.83	□□□□□ -1.96
YLR224W	YLR224W	MRPL51	Q06090	140 aa	Predicted RBP	2.83	□□□□□ -1.96
YLR224W	YLR224W	SYO1	Q07395	620 aa		2.83	□□□□□ -1.96
YLR224W	YLR224W	SET6	Q12529	373 aa		2.83	□□□□□ -1.96
YLR224W	YLR224W	BRR1	Q99177	341 aa	Predicted RBP	2.83	□□□□□ -1.96
YLR224W	YLR224W	RAV1	P47104	1357 aa		2.83	□□□□□ -1.96
YLR224W	YLR224W	CYB2	P00175	591 aa		2.82	□□□□□ -1.96
YLR224W	YLR224W	SPC110	P32380	944 aa		2.82	□□□□□ -1.96
YLR224W	YLR224W	YOX1	P34161	385 aa		2.82	□□□□□ -1.96
YLR224W	YLR224W	CST26	P38226	397 aa		2.82	□□□□□ -1.96
YLR224W	YLR224W	RPH1	P39956	796 aa		2.82	□□□□□ -1.96
YLR224W	YLR224W	YEL057C	P39983	233 aa		2.82	□□□□□ -1.96
YLR224W	YLR224W	ARF3	P40994	183 aa	RIP-Chip data	2.82	□□□□□ -1.96	RIP-Chip
YLR224W	YLR224W	YDL186W	P48568	277 aa		2.82	□□□□□ -1.96
YLR224W	YLR224W	CAF130	P53280	1122 aa	Predicted RBP	2.82	□□□□□ -1.96
YLR224W	YLR224W	GPI1	P53306	609 aa		2.82	□□□□□ -1.96
YLR224W	YLR224W	RLI1	Q03195	608 aa	Known RBP	2.82	□□□□□ -1.96
YLR224W	YLR224W	PHO92	Q06390	306 aa		2.82	□□□□□ -1.96
YLR224W	YLR224W	SEC39	Q12745	709 aa		2.82	□□□□□ -1.96
YLR224W	YLR224W	YDL007C-A	Q2V2Q0	85 aa		2.82	□□□□□ -1.96
YLR224W	YLR224W	ARG3	P05150	338 aa		2.81	□□□□□ -1.96
YLR224W	YLR224W	COR1	P07256	457 aa		2.81	□□□□□ -1.96
YLR224W	YLR224W	RPL20A	P0CX23	172 aa	Known RBP	2.81	□□□□□ -1.96
YLR224W	YLR224W	RPL20B	P0CX24	172 aa	Predicted RBP	2.81	□□□□□ -1.96
YLR224W	YLR224W	BUD14	P27637	709 aa		2.81	□□□□□ -1.96
YLR224W	YLR224W	ATS1	P31386	333 aa		2.81	□□□□□ -1.96
YLR224W	YLR224W	LOS1	P33418	1100 aa	Predicted RBP	2.81	□□□□□ -1.96
YLR224W	YLR224W	KRE9	P39005	276 aa		2.81	□□□□□ -1.96
YLR224W	YLR224W	MBB1	P39534	108 aa		2.81	□□□□□ -1.96
YLR224W	YLR224W	ERP2	P39704	215 aa		2.81	□□□□□ -1.96
YLR224W	YLR224W	RPR2	P40571	144 aa		2.81	□□□□□ -1.96
YLR224W	YLR224W	YJL213W	P40896	331 aa		2.81	□□□□□ -1.96
YLR224W	YLR224W	ELP2	P42935	788 aa		2.81	□□□□□ -1.96
YLR224W	YLR224W	ZPR1	P53303	486 aa	Known RBP	2.81	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms