RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	HEF3	P53978	1044 aa	Known RBP	5.49	□□□□□ -1.53
RSA3	YLR221C	CIK1	Q01649	594 aa		5.49	□□□□□ -1.53
RSA3	YLR221C	NUP100	Q02629	959 aa		5.49	□□□□□ -1.53
RSA3	YLR221C	KAP120	Q02932	1032 aa		5.49	□□□□□ -1.53
RSA3	YLR221C	EKI1	Q03764	534 aa		5.49	□□□□□ -1.53
RSA3	YLR221C	ARX1	Q03862	593 aa	Known RBP	5.49	□□□□□ -1.53
RSA3	YLR221C	TAP42	Q04372	366 aa		5.49	□□□□□ -1.53
RSA3	YLR221C	SPS4	P09937	338 aa		5.48	□□□□□ -1.53
RSA3	YLR221C	ECM32	P32644	1121 aa	Known RBP	5.48	□□□□□ -1.53
RSA3	YLR221C	BNA4	P38169	460 aa		5.48	□□□□□ -1.53
RSA3	YLR221C	SPC97	P38863	823 aa		5.48	□□□□□ -1.53
RSA3	YLR221C	PCL6	P40038	420 aa		5.48	□□□□□ -1.53
RSA3	YLR221C	RTS2	P40962	232 aa		5.48	□□□□□ -1.53
RSA3	YLR221C	YJR154W	P47181	346 aa		5.48	□□□□□ -1.53
RSA3	YLR221C	BNI5	P53890	448 aa	Known RBP	5.48	□□□□□ -1.53
RSA3	YLR221C	VPS9	P54787	451 aa		5.48	□□□□□ -1.53
RSA3	YLR221C	RHO4	Q00246	291 aa		5.48	□□□□□ -1.53
RSA3	YLR221C	YPL014W	Q02606	381 aa		5.48	□□□□□ -1.53
RSA3	YLR221C	SXM1	Q04175	944 aa	Known RBP	5.48	□□□□□ -1.53
RSA3	YLR221C	ROY1	Q04847	553 aa		5.48	□□□□□ -1.53
RSA3	YLR221C	YLR345W	Q06137	509 aa		5.48	□□□□□ -1.53
RSA3	YLR221C	HER1	Q12276	1246 aa		5.48	□□□□□ -1.53
RSA3	YLR221C	SNU66	Q12420	587 aa	Predicted RBP	5.48	□□□□□ -1.53
RSA3	YLR221C	ARP6	Q12509	438 aa		5.48	□□□□□ -1.53
RSA3	YLR221C	AFI1	Q99222	893 aa		5.48	□□□□□ -1.53
RSA3	YLR221C	RHO2	P06781	192 aa		5.47	□□□□□ -1.53
RSA3	YLR221C	SPB1	P25582	841 aa	Predicted RBP	5.47	□□□□□ -1.53
RSA3	YLR221C	MCM4	P30665	933 aa	Known RBP	5.47	□□□□□ -1.53
RSA3	YLR221C	MGM1	P32266	881 aa		5.47	□□□□□ -1.53
RSA3	YLR221C	TFB1	P32776	642 aa		5.47	□□□□□ -1.53
RSA3	YLR221C	PDR3	P33200	976 aa		5.47	□□□□□ -1.53
RSA3	YLR221C	TUL1	P36096	758 aa		5.47	□□□□□ -1.53
RSA3	YLR221C	APE3	P37302	537 aa	Known RBP	5.47	□□□□□ -1.53
RSA3	YLR221C	TCM62	P38228	572 aa	Known RBP	5.47	□□□□□ -1.53
RSA3	YLR221C	TIF4631	P39935	952 aa	Known RBP	5.47	□□□□□ -1.53
RSA3	YLR221C	PCI8	P40512	444 aa		5.47	□□□□□ -1.53
RSA3	YLR221C	YIR016W	P40572	265 aa		5.47	□□□□□ -1.53
RSA3	YLR221C	MDV1	P47025	714 aa		5.47	□□□□□ -1.53
RSA3	YLR221C	URB2	P47108	1174 aa		5.47	□□□□□ -1.53
RSA3	YLR221C	FMS1	P50264	508 aa		5.47	□□□□□ -1.53
RSA3	YLR221C	YGL108C	P53139	140 aa		5.47	□□□□□ -1.53
RSA3	YLR221C	ART5	P53244	586 aa	Known RBP	5.47	□□□□□ -1.53
RSA3	YLR221C	DON1	Q05610	365 aa		5.47	□□□□□ -1.53
RSA3	YLR221C	PPH22	P23595	377 aa		5.46	□□□□□ -1.54
RSA3	YLR221C	URA7	P28274	579 aa	Known RBP	5.46	□□□□□ -1.54
RSA3	YLR221C	AFG1	P32317	509 aa		5.46	□□□□□ -1.54
RSA3	YLR221C	RML2	P32611	393 aa		5.46	□□□□□ -1.54
RSA3	YLR221C	YME2	P32843	850 aa		5.46	□□□□□ -1.54
RSA3	YLR221C	PHD1	P36093	366 aa		5.46	□□□□□ -1.54
RSA3	YLR221C	NTC20	P38302	140 aa	Predicted RBP	5.46	□□□□□ -1.54
RSA3	YLR221C	GAT1	P43574	510 aa		5.46	□□□□□ -1.54
RSA3	YLR221C	YGR149W	P48236	432 aa		5.46	□□□□□ -1.54
RSA3	YLR221C	SLG1	P54867	378 aa		5.46	□□□□□ -1.54
RSA3	YLR221C	RCF1	Q03713	159 aa		5.46	□□□□□ -1.54
RSA3	YLR221C	AIM32	Q04689	311 aa		5.46	□□□□□ -1.54
RSA3	YLR221C	RSF1	Q05043	376 aa		5.46	□□□□□ -1.54
RSA3	YLR221C	RRP45	Q05636	305 aa	Known RBP	5.46	□□□□□ -1.54
RSA3	YLR221C	UBX3	Q12229	455 aa		5.46	□□□□□ -1.54
RSA3	YLR221C	HSP82	P02829	709 aa	Known RBP	5.45	□□□□□ -1.54
RSA3	YLR221C	RAD52	P06778	471 aa	Known RBP	5.45	□□□□□ -1.54
RSA3	YLR221C	TYR1	P20049	452 aa		5.45	□□□□□ -1.54
RSA3	YLR221C	YCP4	P25349	247 aa	Known RBP	5.45	□□□□□ -1.54
RSA3	YLR221C	IDH2	P28241	369 aa	Known RBP	5.45	□□□□□ -1.54
RSA3	YLR221C	DUG2	P38149	878 aa		5.45	□□□□□ -1.54
RSA3	YLR221C	ERG7	P38604	731 aa		5.45	□□□□□ -1.54
RSA3	YLR221C	LRP1	P38801	184 aa	Known RBP	5.45	□□□□□ -1.54
RSA3	YLR221C	OCA1	P50946	238 aa	Predicted RBP	5.45	□□□□□ -1.54
RSA3	YLR221C	ZPR1	P53303	486 aa	Known RBP	5.45	□□□□□ -1.54
RSA3	YLR221C	BUD32	P53323	261 aa		5.45	□□□□□ -1.54
RSA3	YLR221C	ESBP6	P53918	673 aa		5.45	□□□□□ -1.54
RSA3	YLR221C	SEC5	P89102	971 aa		5.45	□□□□□ -1.54
RSA3	YLR221C	SOV1	Q04748	898 aa		5.45	□□□□□ -1.54
RSA3	YLR221C	ISN1	Q99312	450 aa		5.45	□□□□□ -1.54
RSA3	YLR221C	RPL42A	P0CX27	106 aa	Known RBP	5.44	□□□□□ -1.54
RSA3	YLR221C	RPL42B	P0CX28	106 aa	Known RBP	5.44	□□□□□ -1.54
RSA3	YLR221C	ZIM17	P42844	174 aa		5.44	□□□□□ -1.54
RSA3	YLR221C	RMD9	P53140	646 aa	Known RBP	5.44	□□□□□ -1.54
RSA3	YLR221C	YGL082W	P53155	381 aa		5.44	□□□□□ -1.54
RSA3	YLR221C	DRN1	P53255	507 aa	Known RBP	5.44	□□□□□ -1.54
RSA3	YLR221C	GLO2	Q05584	274 aa		5.44	□□□□□ -1.54
RSA3	YLR221C	GPH1	P06738	902 aa	Known RBP	5.43	□□□□□ -1.54
RSA3	YLR221C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.43	□□□□□ -1.54	not detected
RSA3	YLR221C	CPR2	P23285	205 aa		5.43	□□□□□ -1.54
RSA3	YLR221C	SNT1	P25357	1226 aa		5.43	□□□□□ -1.54
RSA3	YLR221C	MSN2	P33748	704 aa		5.43	□□□□□ -1.54
RSA3	YLR221C	ASK1	P35734	292 aa		5.43	□□□□□ -1.54
RSA3	YLR221C	MIC60	P36112	540 aa		5.43	□□□□□ -1.54
RSA3	YLR221C	VMA13	P41807	478 aa	Known RBP	5.43	□□□□□ -1.54
RSA3	YLR221C	FET5	P43561	622 aa		5.43	□□□□□ -1.54
RSA3	YLR221C	CAK1	P43568	368 aa	Predicted RBP	5.43	□□□□□ -1.54
RSA3	YLR221C	YGL138C	P53122	345 aa		5.43	□□□□□ -1.54
RSA3	YLR221C	SKO1	Q02100	647 aa		5.43	□□□□□ -1.54
RSA3	YLR221C	MSS11	Q03825	758 aa		5.43	□□□□□ -1.54
RSA3	YLR221C	DIC1	Q06143	298 aa		5.43	□□□□□ -1.54
RSA3	YLR221C	SUC2	P00724	532 aa		5.42	□□□□□ -1.54
RSA3	YLR221C	YPT1	P01123	206 aa	Known RBP	5.42	□□□□□ -1.54
RSA3	YLR221C	APE1	P14904	514 aa		5.42	□□□□□ -1.54
RSA3	YLR221C	SRV2	P17555	526 aa	Known RBP	5.42	□□□□□ -1.54
RSA3	YLR221C	RPS2	P25443	254 aa	Known RBP	5.42	□□□□□ -1.54
RSA3	YLR221C	YIM1	P28625	365 aa		5.42	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms