RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W GRS2Q06817 618 aa9.73□□□□□ -0.85
SHH4YLR164W SGT1Q08446 395 aa9.73□□□□□ -0.85
SHH4YLR164W YPR011CQ12251 326 aa9.73□□□□□ -0.85
SHH4YLR164W RGT2Q12300 763 aa9.73□□□□□ -0.85
SHH4YLR164W JLP1Q12358 412 aa9.73□□□□□ -0.85
SHH4YLR164W MSB2P32334 1306 aa9.73□□□□□ -0.85
SHH4YLR164W COX13P32799 129 aa9.72□□□□□ -0.85
SHH4YLR164W RPT5P33297 434 aaKnown RBP9.72□□□□□ -0.85
SHH4YLR164W FRE2P36033 711 aa9.72□□□□□ -0.85
SHH4YLR164W YPT35P38815 214 aaKnown RBP9.72□□□□□ -0.85
SHH4YLR164W FMO1P38866 432 aa9.72□□□□□ -0.85
SHH4YLR164W MAM33P40513 266 aa9.72□□□□□ -0.85
SHH4YLR164W CCT7P42943 550 aaKnown RBP9.72□□□□□ -0.85
SHH4YLR164W YJR030CP47101 745 aa9.72□□□□□ -0.85
SHH4YLR164W PRP38Q00723 242 aaPredicted RBP9.72□□□□□ -0.85
SHH4YLR164W YLR413WQ06689 675 aa9.72□□□□□ -0.85
SHH4YLR164W ASA1Q06822 443 aa9.72□□□□□ -0.85
SHH4YLR164W YDL121CQ07541 149 aa9.72□□□□□ -0.85
SHH4YLR164W YLL032CQ07834 825 aaKnown RBP RIP-Chip data9.72□□□□□ -0.85not detected
SHH4YLR164W RRP42Q12277 265 aaPredicted RBP9.72□□□□□ -0.85
SHH4YLR164W ATP2P00830 511 aaKnown RBP9.71□□□□□ -0.86
SHH4YLR164W RSR1P13856 272 aa9.71□□□□□ -0.86
SHH4YLR164W CCA1P21269 546 aa9.71□□□□□ -0.86
SHH4YLR164W REC107P21651 314 aa9.71□□□□□ -0.86
SHH4YLR164W SGV1P23293 657 aaKnown RBP9.71□□□□□ -0.86
SHH4YLR164W ZIP1P31111 875 aa9.71□□□□□ -0.86
SHH4YLR164W HXT4P32467 576 aa9.71□□□□□ -0.86
SHH4YLR164W YKR078WP36158 585 aaKnown RBP9.71□□□□□ -0.86
SHH4YLR164W DED81P38707 554 aaKnown RBP9.71□□□□□ -0.86
SHH4YLR164W HXT6P39003 570 aaKnown RBP9.71□□□□□ -0.86
SHH4YLR164W HXT7P39004 570 aa9.71□□□□□ -0.86
SHH4YLR164W GIM4P40005 111 aaKnown RBP9.71□□□□□ -0.86
SHH4YLR164W ALG5P40350 334 aa9.71□□□□□ -0.86
SHH4YLR164W NUP85P46673 744 aa9.71□□□□□ -0.86
SHH4YLR164W MDM34P53083 459 aa9.71□□□□□ -0.86
SHH4YLR164W ARC35P53731 342 aaKnown RBP9.71□□□□□ -0.86
SHH4YLR164W VHS1Q03785 461 aa9.71□□□□□ -0.86
SHH4YLR164W MCH5Q08777 521 aa9.71□□□□□ -0.86
SHH4YLR164W RTT10Q08924 1013 aa9.71□□□□□ -0.86
SHH4YLR164W SRO7Q12038 1033 aa9.71□□□□□ -0.86
SHH4YLR164W MCD1Q12158 566 aa9.71□□□□□ -0.86
SHH4YLR164W GPR1Q12361 961 aa9.71□□□□□ -0.86
SHH4YLR164W SRN2Q99176 213 aa9.71□□□□□ -0.86
SHH4YLR164W SAS5Q99314 248 aa9.71□□□□□ -0.86
SHH4YLR164W ATP6P00854 259 aa9.7□□□□□ -0.86
SHH4YLR164W ARG81P05085 880 aa9.7□□□□□ -0.86
SHH4YLR164W TRM1P15565 570 aaKnown RBP9.7□□□□□ -0.86
SHH4YLR164W PDC5P16467 563 aaKnown RBP9.7□□□□□ -0.86
SHH4YLR164W BMT2P38278 337 aa9.7□□□□□ -0.86
SHH4YLR164W YIL108WP40483 696 aaKnown RBP9.7□□□□□ -0.86
SHH4YLR164W COS12P53053 380 aa9.7□□□□□ -0.86
SHH4YLR164W MET31Q03081 177 aa9.7□□□□□ -0.86
SHH4YLR164W YMR034CQ05131 434 aaPredicted RBP9.7□□□□□ -0.86
SHH4YLR164W IOC2Q12072 812 aa9.7□□□□□ -0.86
SHH4YLR164W HTA2P04912 132 aa9.69□□□□□ -0.86
SHH4YLR164W RPS4AP0CX35 261 aaKnown RBP9.69□□□□□ -0.86
SHH4YLR164W RPS4BP0CX36 261 aaKnown RBP9.69□□□□□ -0.86
SHH4YLR164W POL30P15873 258 aaKnown RBP9.69□□□□□ -0.86
SHH4YLR164W PHO91P27514 894 aa9.69□□□□□ -0.86
SHH4YLR164W MED8P38304 223 aa9.69□□□□□ -0.86
SHH4YLR164W FTH1P38310 465 aa9.69□□□□□ -0.86
SHH4YLR164W YNL260CP53846 198 aa9.69□□□□□ -0.86
SHH4YLR164W GIP3Q03016 1276 aa9.69□□□□□ -0.86
SHH4YLR164W DYN3Q04949 312 aa9.69□□□□□ -0.86
SHH4YLR164W EAF1Q06337 982 aa9.69□□□□□ -0.86
SHH4YLR164W UAF30Q08747 228 aa9.69□□□□□ -0.86
SHH4YLR164W YCL012CQ8J0M4 134 aa9.69□□□□□ -0.86
SHH4YLR164W RPL24AP04449 155 aaKnown RBP9.68□□□□□ -0.86
SHH4YLR164W SCL1P21243 252 aaKnown RBP9.68□□□□□ -0.86
SHH4YLR164W TRX3P25372 127 aa9.68□□□□□ -0.86
SHH4YLR164W NRP1P32770 719 aaKnown RBP RIP-Chip data9.68□□□□□ -0.86not detected
SHH4YLR164W ATG7P38862 630 aa9.68□□□□□ -0.86
SHH4YLR164W VRG4P40107 337 aa9.68□□□□□ -0.86
SHH4YLR164W RLP7P40693 322 aaKnown RBP9.68□□□□□ -0.86
SHH4YLR164W ERG26P53199 349 aaKnown RBP9.68□□□□□ -0.86
SHH4YLR164W ATP25Q03153 612 aa9.68□□□□□ -0.86
SHH4YLR164W YHC1Q05900 231 aaKnown RBP9.68□□□□□ -0.86
SHH4YLR164W BCP1Q06338 283 aa9.68□□□□□ -0.86
SHH4YLR164W YOL159CQ08300 171 aa9.68□□□□□ -0.86
SHH4YLR164W TFB4Q12004 338 aa9.68□□□□□ -0.86
SHH4YLR164W HAL9Q12180 1030 aa9.68□□□□□ -0.86
SHH4YLR164W RPS21AP0C0V8 87 aaKnown RBP9.67□□□□□ -0.86
SHH4YLR164W KAR1P11927 433 aa9.67□□□□□ -0.86
SHH4YLR164W HES1P35843 434 aa9.67□□□□□ -0.86
SHH4YLR164W MRPL37P36532 105 aa9.67□□□□□ -0.86
SHH4YLR164W CBP4P37267 147 aa9.67□□□□□ -0.86
SHH4YLR164W GGC1P38988 300 aa9.67□□□□□ -0.86
SHH4YLR164W NDE1P40215 560 aa9.67□□□□□ -0.86
SHH4YLR164W IAH1P41734 238 aa9.67□□□□□ -0.86
SHH4YLR164W ZIM17P42844 174 aa9.67□□□□□ -0.86
SHH4YLR164W CIS3P47001 227 aa9.67□□□□□ -0.86
SHH4YLR164W MPS3P47069 682 aa9.67□□□□□ -0.86
SHH4YLR164W GTO1P48239 356 aa9.67□□□□□ -0.86
SHH4YLR164W KXD1P53158 218 aa9.67□□□□□ -0.86
SHH4YLR164W CAF120P53836 1060 aa9.67□□□□□ -0.86
SHH4YLR164W YML053CQ04978 212 aa9.67□□□□□ -0.86
SHH4YLR164W ATG26Q06321 1198 aa9.67□□□□□ -0.86
SHH4YLR164W YFT2Q06676 274 aa9.67□□□□□ -0.86
SHH4YLR164W YIG1Q08956 461 aa9.67□□□□□ -0.86
SHH4YLR164W ATG29Q12092 213 aa9.67□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms