RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT23	YKL020C	FMO1	P38866	432 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	MNN9	P39107	395 aa	Known RBP	3.88	□□□□□ -1.79
SPT23	YKL020C	CEM1	P39525	442 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	SOP4	P39543	234 aa	Predicted RBP	3.88	□□□□□ -1.79
SPT23	YKL020C	COS4	P43542	379 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	COS5	P47187	383 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	YGL204C	P53089	101 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	ARO8	P53090	500 aa	Known RBP	3.88	□□□□□ -1.79
SPT23	YKL020C	FMP48	P53233	369 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	RRN9	P53437	365 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	COS1	P53822	381 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	SKI8	Q02793	397 aa	Predicted RBP	3.88	□□□□□ -1.79
SPT23	YKL020C	CAB1	Q04430	367 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	THI7	Q05998	598 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	YOL075C	Q08234	1294 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	DGK1	Q12382	290 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	DFG16	Q99234	619 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	CDC6	P09119	513 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	RRP3	P38712	501 aa	Known RBP	3.88	□□□□□ -1.79
SPT23	YKL020C	RPL34B	P40525	121 aa	Known RBP	3.88	□□□□□ -1.79
SPT23	YKL020C	RPL22B	P56628	122 aa	Known RBP	3.88	□□□□□ -1.79
SPT23	YKL020C	DID2	P69771	204 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	YPL107W	Q02873	248 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	FAR10	Q06001	478 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	BOP2	Q06150	570 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	BCP1	Q06338	283 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	FRE5	Q08908	694 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	GET3	Q12154	354 aa	Known RBP	3.88	□□□□□ -1.79
SPT23	YKL020C	RPN5	Q12250	445 aa	Known RBP	3.88	□□□□□ -1.79
SPT23	YKL020C	GLO4	Q12320	285 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	RPN6	Q12377	434 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	FRE6	Q12473	712 aa		3.88	□□□□□ -1.79
SPT23	YKL020C	RPS9A	O13516	197 aa	Known RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	TUB2	P02557	457 aa	Known RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	RPS9B	P05755	195 aa	Known RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	MET2	P08465	486 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	RPL4A	P10664	362 aa	Known RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	PHA2	P32452	334 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	ERG1	P32476	496 aa	Known RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	SIP2	P34164	415 aa	Known RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	GLY1	P37303	387 aa	Known RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	ACO2	P39533	789 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	RPN3	P40016	523 aa	Known RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	PFK26	P40433	827 aa	Known RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	GAB1	P41733	394 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	HXT14	P42833	540 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	JHD2	P47156	728 aa	Predicted RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	RPL4B	P49626	362 aa	Known RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	YTP1	P53584	459 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	TGL2	P54857	326 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	RSN1	Q03516	953 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	VTA1	Q06263	330 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	HDA3	Q06623	655 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	RCL1	Q08096	367 aa	Predicted RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	MLH3	Q12083	715 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
SPT23	YKL020C	GRX6	Q12438	231 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	BNI1	P41832	1953 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	RPP2A	P05319	106 aa	Known RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	GPH1	P06738	902 aa	Known RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	MAS1	P10507	462 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	TOP3	P13099	656 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	FBA1	P14540	359 aa	Known RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	PET9	P18239	318 aa	Known RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	AFT1	P22149	690 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	YSP3	P25036	478 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	ADP1	P25371	1049 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	EMC1	P25574	760 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	DGR2	P32330	852 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	SPT14	P32363	452 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	DAL3	P32459	195 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	SUA5	P32579	426 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	SKG1	P36169	355 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	ARA1	P38115	344 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	ECM2	P38241	364 aa	Known RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	NVJ1	P38881	321 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	PRK1	P40494	810 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	YJR154W	P47181	346 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	ASK10	P48361	1146 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	MRPL13	Q02204	264 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	ARL3	Q02804	198 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	PEX25	Q02969	394 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	GAL83	Q04739	417 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	YDL129W	Q07555	291 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	FMP45	Q07651	309 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	REX4	Q08237	289 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	YPR202W	Q08993	238 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	LDB19	Q12502	818 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	GAL7	P08431	366 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	INO1	P11986	533 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	HEM15	P16622	393 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
SPT23	YKL020C	CAM1	P29547	415 aa	Known RBP	3.87	□□□□□ -1.79
SPT23	YKL020C	AIM18	P38884	321 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	SCC4	P40090	624 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	PSF2	P40359	213 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	THI12	P42883	340 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	THI5	P43534	340 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	SAD1	P43589	448 aa		3.87	□□□□□ -1.79
SPT23	YKL020C	YGR117C	P53270	476 aa		3.87	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms