RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W YLL058WQ12198 575 aa4.4□□□□□ -1.7
AVT1YJR001W LDB17Q12342 491 aa4.4□□□□□ -1.7
AVT1YJR001W TY1A-DR3Q12441 440 aa4.4□□□□□ -1.7
AVT1YJR001W MRPL23Q12487 163 aaPredicted RBP4.4□□□□□ -1.7
AVT1YJR001W YIL177CP40434 1758 aa4.4□□□□□ -1.71
AVT1YJR001W YJL225CP40889 1758 aa4.4□□□□□ -1.71
AVT1YJR001W CBP2P03874 630 aaPredicted RBP4.39□□□□□ -1.71
AVT1YJR001W CDC36P06100 191 aaPredicted RBP4.39□□□□□ -1.71
AVT1YJR001W TY2A-LR1P0C2J4 438 aa4.39□□□□□ -1.71
AVT1YJR001W TY2A-FP0CX61 438 aa4.39□□□□□ -1.71
AVT1YJR001W TY2A-GR2P0CX62 438 aa4.39□□□□□ -1.71
AVT1YJR001W KIN3P22209 435 aa4.39□□□□□ -1.71
AVT1YJR001W PEX1P24004 1043 aa4.39□□□□□ -1.71
AVT1YJR001W TY2A-CP25383 438 aa4.39□□□□□ -1.71
AVT1YJR001W BOS1P25385 244 aa4.39□□□□□ -1.71
AVT1YJR001W EMC1P25574 760 aa4.39□□□□□ -1.71
AVT1YJR001W HXT1P32465 570 aa4.39□□□□□ -1.71
AVT1YJR001W COT1P32798 439 aa4.39□□□□□ -1.71
AVT1YJR001W LRG1P35688 1017 aa4.39□□□□□ -1.71
AVT1YJR001W YKR075CP36155 307 aa4.39□□□□□ -1.71
AVT1YJR001W ADE17P38009 592 aaKnown RBP4.39□□□□□ -1.71
AVT1YJR001W FLR1P38124 548 aa4.39□□□□□ -1.71
AVT1YJR001W WSS1P38838 269 aa4.39□□□□□ -1.71
AVT1YJR001W FRT2P39734 528 aa4.39□□□□□ -1.71
AVT1YJR001W PCL6P40038 420 aa4.39□□□□□ -1.71
AVT1YJR001W RTR1P40084 226 aaPredicted RBP4.39□□□□□ -1.71
AVT1YJR001W CAB2P40506 365 aa4.39□□□□□ -1.71
AVT1YJR001W RTS2P40962 232 aa4.39□□□□□ -1.71
AVT1YJR001W FET4P40988 552 aa4.39□□□□□ -1.71
AVT1YJR001W RAI1P53063 387 aaKnown RBP4.39□□□□□ -1.71
AVT1YJR001W MTC3P53077 123 aa4.39□□□□□ -1.71
AVT1YJR001W SLX9P53251 210 aaPredicted RBP4.39□□□□□ -1.71
AVT1YJR001W AQR1P53943 586 aa4.39□□□□□ -1.71
AVT1YJR001W NGL2Q03264 515 aaKnown RBP4.39□□□□□ -1.71
AVT1YJR001W TY2A-DR2Q03483 438 aa4.39□□□□□ -1.71
AVT1YJR001W VPS38Q05919 439 aa4.39□□□□□ -1.71
AVT1YJR001W CUR1Q06469 252 aa4.39□□□□□ -1.71
AVT1YJR001W STP4Q07351 490 aa4.39□□□□□ -1.71
AVT1YJR001W HBT1Q07653 1046 aaKnown RBP4.39□□□□□ -1.71
AVT1YJR001W DCI1Q08558 271 aa4.39□□□□□ -1.71
AVT1YJR001W TY2A-BQ12260 438 aa4.39□□□□□ -1.71
AVT1YJR001W TY2A-OR2Q12293 438 aa4.39□□□□□ -1.71
AVT1YJR001W GPR1Q12361 961 aa4.39□□□□□ -1.71
AVT1YJR001W TY2A-DR1Q12392 438 aa4.39□□□□□ -1.71
AVT1YJR001W TY2A-OR1Q12439 438 aa4.39□□□□□ -1.71
AVT1YJR001W YOS9Q99220 542 aa4.39□□□□□ -1.71
AVT1YJR001W TY2A-DR3Q99303 438 aa4.39□□□□□ -1.71
AVT1YJR001W HIS4P00815 799 aaKnown RBP4.39□□□□□ -1.71
AVT1YJR001W DFR1P07807 211 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
AVT1YJR001W SYN8P31377 255 aa4.39□□□□□ -1.71
AVT1YJR001W ERG1P32476 496 aaKnown RBP4.39□□□□□ -1.71
AVT1YJR001W REG2P38232 338 aa4.39□□□□□ -1.71
AVT1YJR001W GDT1P38301 280 aaPredicted RBP4.39□□□□□ -1.71
AVT1YJR001W RRT2P38332 387 aa4.39□□□□□ -1.71
AVT1YJR001W SET5P38890 526 aaKnown RBP4.39□□□□□ -1.71
AVT1YJR001W MNN9P39107 395 aaKnown RBP4.39□□□□□ -1.71
AVT1YJR001W FCY21P40039 528 aa4.39□□□□□ -1.71
AVT1YJR001W SLZ1P40167 298 aa4.39□□□□□ -1.71
AVT1YJR001W PIG2P40187 538 aa4.39□□□□□ -1.71
AVT1YJR001W MSS2P40990 351 aa4.39□□□□□ -1.71
AVT1YJR001W TMA22P47089 198 aaPredicted RBP4.39□□□□□ -1.71
AVT1YJR001W MCM6P53091 1017 aaKnown RBP4.39□□□□□ -1.71
AVT1YJR001W OKP1P53298 406 aa4.39□□□□□ -1.71
AVT1YJR001W RHO5P53879 331 aaKnown RBP4.39□□□□□ -1.71
AVT1YJR001W YNL143CP53908 130 aa4.39□□□□□ -1.71
AVT1YJR001W RSN1Q03516 953 aa4.39□□□□□ -1.71
AVT1YJR001W VPS64Q03944 604 aa4.39□□□□□ -1.71
AVT1YJR001W YEH1Q07804 573 aa4.39□□□□□ -1.71
AVT1YJR001W THI21Q08975 551 aa4.39□□□□□ -1.71
AVT1YJR001W SPE4Q12455 300 aa4.39□□□□□ -1.71
AVT1YJR001W YJR112W-AQ3E743 109 aa4.39□□□□□ -1.71
AVT1YJR001W RRP5Q05022 1729 aaKnown RBP4.38□□□□□ -1.71
AVT1YJR001W YRF1-2P40105 1681 aa4.38□□□□□ -1.71
AVT1YJR001W URA3P03962 267 aa4.38□□□□□ -1.71
AVT1YJR001W GCD2P12754 651 aaPredicted RBP4.38□□□□□ -1.71
AVT1YJR001W ERG8P24521 451 aa4.38□□□□□ -1.71
AVT1YJR001W SUA5P32579 426 aa4.38□□□□□ -1.71
AVT1YJR001W RAD5P32849 1169 aaPredicted RBP4.38□□□□□ -1.71
AVT1YJR001W GLG1P36143 616 aa4.38□□□□□ -1.71
AVT1YJR001W BZZ1P38822 633 aa4.38□□□□□ -1.71
AVT1YJR001W SCC4P40090 624 aa4.38□□□□□ -1.71
AVT1YJR001W BUD8P41698 603 aa4.38□□□□□ -1.71
AVT1YJR001W STB1P42845 420 aa4.38□□□□□ -1.71
AVT1YJR001W ELP2P42935 788 aa4.38□□□□□ -1.71
AVT1YJR001W LSM1P47017 172 aaKnown RBP4.38□□□□□ -1.71
AVT1YJR001W NET1P47035 1189 aa4.38□□□□□ -1.71
AVT1YJR001W INN1P53901 409 aa4.38□□□□□ -1.71
AVT1YJR001W YMR210WQ03649 449 aa4.38□□□□□ -1.71
AVT1YJR001W RPN9Q04062 393 aaKnown RBP4.38□□□□□ -1.71
AVT1YJR001W PPM1Q04081 328 aa4.38□□□□□ -1.71
AVT1YJR001W RQC1Q05468 723 aaKnown RBP4.38□□□□□ -1.71
AVT1YJR001W DIS3Q08162 1001 aaKnown RBP4.38□□□□□ -1.71
AVT1YJR001W GSH2Q08220 491 aa4.38□□□□□ -1.71
AVT1YJR001W TFB5Q3E7C1 72 aaPredicted RBP4.38□□□□□ -1.71
AVT1YJR001W NCB2Q92317 146 aa4.38□□□□□ -1.71
AVT1YJR001W RPO41P13433 1351 aaKnown RBP4.38□□□□□ -1.71
AVT1YJR001W APC1P53886 1748 aa4.37□□□□□ -1.71
AVT1YJR001W YPR089WO13585 888 aa4.37□□□□□ -1.71
AVT1YJR001W CHS1P08004 1131 aa4.37□□□□□ -1.71
AVT1YJR001W KIN2P13186 1147 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms