RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C DOM34P33309 386 aa9.45□□□□□ -0.9
MET28YIR017C RMA1P36001 430 aaKnown RBP9.45□□□□□ -0.9
MET28YIR017C YPS6P40583 537 aa9.45□□□□□ -0.9
MET28YIR017C MET12P46151 657 aa9.45□□□□□ -0.9
MET28YIR017C CIS3P47001 227 aa9.45□□□□□ -0.9
MET28YIR017C SGF73P53165 657 aa9.45□□□□□ -0.9
MET28YIR017C UAF30Q08747 228 aa9.45□□□□□ -0.9
MET28YIR017C HXK2P04807 486 aaKnown RBP9.44□□□□□ -0.9
MET28YIR017C RDS2P19541 446 aaKnown RBP9.44□□□□□ -0.9
MET28YIR017C PRP6P19735 899 aaPredicted RBP9.44□□□□□ -0.9
MET28YIR017C RAD14P28519 371 aa9.44□□□□□ -0.9
MET28YIR017C HXT4P32467 576 aa9.44□□□□□ -0.9
MET28YIR017C HXT6P39003 570 aaKnown RBP9.44□□□□□ -0.9
MET28YIR017C HXT7P39004 570 aa9.44□□□□□ -0.9
MET28YIR017C LTP1P40347 161 aa9.44□□□□□ -0.9
MET28YIR017C CAB2P40506 365 aa9.44□□□□□ -0.9
MET28YIR017C RLP7P40693 322 aaKnown RBP9.44□□□□□ -0.9
MET28YIR017C SEC27P41811 889 aaKnown RBP9.44□□□□□ -0.9
MET28YIR017C FET5P43561 622 aa9.44□□□□□ -0.9
MET28YIR017C YGL176CP46945 554 aa9.44□□□□□ -0.9
MET28YIR017C YNR021WP53723 404 aaKnown RBP9.44□□□□□ -0.9
MET28YIR017C RHO3Q00245 231 aaKnown RBP9.44□□□□□ -0.9
MET28YIR017C GTR1Q00582 310 aa9.44□□□□□ -0.9
MET28YIR017C SPC24Q04477 213 aa9.44□□□□□ -0.9
MET28YIR017C YPL245WQ12179 454 aaKnown RBP9.44□□□□□ -0.9
MET28YIR017C YCL012CQ8J0M4 134 aa9.44□□□□□ -0.9
MET28YIR017C SAS5Q99314 248 aa9.44□□□□□ -0.9
MET28YIR017C HRP1Q99383 534 aaKnown RBP9.44□□□□□ -0.9
MET28YIR017C CMP2P14747 604 aa9.43□□□□□ -0.9
MET28YIR017C MEI5P32489 222 aa9.43□□□□□ -0.9
MET28YIR017C SIP2P34164 415 aaKnown RBP9.43□□□□□ -0.9
MET28YIR017C PTC1P35182 281 aa9.43□□□□□ -0.9
MET28YIR017C ARA1P38115 344 aa9.43□□□□□ -0.9
MET28YIR017C YBL029WP38201 376 aa9.43□□□□□ -0.9
MET28YIR017C YHR033WP38690 423 aa9.43□□□□□ -0.9
MET28YIR017C CEM1P39525 442 aa9.43□□□□□ -0.9
MET28YIR017C YFR020WP43600 232 aa9.43□□□□□ -0.9
MET28YIR017C NAS6P50086 228 aa9.43□□□□□ -0.9
MET28YIR017C KXD1P53158 218 aa9.43□□□□□ -0.9
MET28YIR017C YNL140CP53910 189 aa9.43□□□□□ -0.9
MET28YIR017C YMR111CQ04461 462 aaPredicted RBP9.43□□□□□ -0.9
MET28YIR017C GLO2Q05584 274 aa9.43□□□□□ -0.9
MET28YIR017C YEH2Q07950 538 aa9.43□□□□□ -0.9
MET28YIR017C SGT1Q08446 395 aa9.43□□□□□ -0.9
MET28YIR017C MHT1Q12525 324 aa9.43□□□□□ -0.9
MET28YIR017C SNF5P18480 905 aa9.42□□□□□ -0.9
MET28YIR017C SGV1P23293 657 aaKnown RBP9.42□□□□□ -0.9
MET28YIR017C PHO87P25360 923 aa9.42□□□□□ -0.9
MET28YIR017C SSE1P32589 693 aaKnown RBP9.42□□□□□ -0.9
MET28YIR017C SFC1P33303 322 aa9.42□□□□□ -0.9
MET28YIR017C VPS21P36017 210 aaKnown RBP9.42□□□□□ -0.9
MET28YIR017C CUE2P36075 443 aaKnown RBP9.42□□□□□ -0.9
MET28YIR017C CAF4P36130 643 aa9.42□□□□□ -0.9
MET28YIR017C YCR087C-AP37263 153 aa9.42□□□□□ -0.9
MET28YIR017C YBR071WP38243 211 aa9.42□□□□□ -0.9
MET28YIR017C AXL2P38928 823 aa9.42□□□□□ -0.9
MET28YIR017C GGC1P38988 300 aa9.42□□□□□ -0.9
MET28YIR017C ERV46P39727 415 aa9.42□□□□□ -0.9
MET28YIR017C SUM1P46676 1062 aa9.42□□□□□ -0.9
MET28YIR017C HXT16P47185 567 aa9.42□□□□□ -0.9
MET28YIR017C GTO1P48239 356 aa9.42□□□□□ -0.9
MET28YIR017C MTR3P48240 250 aaPredicted RBP9.42□□□□□ -0.9
MET28YIR017C HXT15P54854 567 aa9.42□□□□□ -0.9
MET28YIR017C CTK1Q03957 528 aaKnown RBP9.42□□□□□ -0.9
MET28YIR017C GTB1Q04924 702 aa9.42□□□□□ -0.9
MET28YIR017C BNA5Q05979 453 aa9.42□□□□□ -0.9
MET28YIR017C OPT2Q06593 877 aa9.42□□□□□ -0.9
MET28YIR017C CMR1Q12510 522 aaKnown RBP9.42□□□□□ -0.9
MET28YIR017C PRT1P06103 763 aaKnown RBP9.41□□□□□ -0.9
MET28YIR017C KIN2P13186 1147 aaKnown RBP9.41□□□□□ -0.9
MET28YIR017C OCA4P25366 362 aa9.41□□□□□ -0.9
MET28YIR017C FZO1P38297 855 aa9.41□□□□□ -0.9
MET28YIR017C YHL008CP38750 627 aa9.41□□□□□ -0.9
MET28YIR017C LYS1P38998 373 aaRIP-Chip data9.41□□□□□ -0.9not detected
MET28YIR017C TMA22P47089 198 aaPredicted RBP9.41□□□□□ -0.9
MET28YIR017C USE1P53146 245 aa9.41□□□□□ -0.9
MET28YIR017C NNF2P53253 936 aa9.41□□□□□ -0.9
MET28YIR017C PRP38Q00723 242 aaPredicted RBP9.41□□□□□ -0.9
MET28YIR017C IRC15Q02733 499 aa9.41□□□□□ -0.9
MET28YIR017C ECM11Q04110 302 aa9.41□□□□□ -0.9
MET28YIR017C YET2Q04210 160 aa9.41□□□□□ -0.9
MET28YIR017C FAR10Q06001 478 aa9.41□□□□□ -0.9
MET28YIR017C DIA2Q08496 732 aaPredicted RBP9.41□□□□□ -0.9
MET28YIR017C HUA2Q12134 243 aa9.41□□□□□ -0.9
MET28YIR017C YOR114WQ12219 294 aa9.41□□□□□ -0.9
MET28YIR017C ARD1P07347 238 aaPredicted RBP9.4□□□□□ -0.9
MET28YIR017C RPS21AP0C0V8 87 aaKnown RBP9.4□□□□□ -0.9
MET28YIR017C RPS4AP0CX35 261 aaKnown RBP9.4□□□□□ -0.9
MET28YIR017C RPS4BP0CX36 261 aaKnown RBP9.4□□□□□ -0.9
MET28YIR017C TRM1P15565 570 aaKnown RBP9.4□□□□□ -0.9
MET28YIR017C SPS22P25380 463 aa9.4□□□□□ -0.9
MET28YIR017C FUN30P31380 1131 aa9.4□□□□□ -0.9
MET28YIR017C SPT16P32558 1035 aaKnown RBP9.4□□□□□ -0.9
MET28YIR017C CDC13P32797 924 aaKnown RBP9.4□□□□□ -0.9
MET28YIR017C FRE2P36033 711 aa9.4□□□□□ -0.9
MET28YIR017C EMC3P36039 253 aa9.4□□□□□ -0.9
MET28YIR017C MEP2P41948 499 aa9.4□□□□□ -0.9
MET28YIR017C YJL049WP47048 450 aa9.4□□□□□ -0.9
MET28YIR017C MPS3P47069 682 aa9.4□□□□□ -0.9
MET28YIR017C IMA1P53051 589 aa9.4□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms