RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W ERP4Q12450 207 aa2.34□□□□□ -2.03
RPL40AYIL148W YDL007C-AQ2V2Q0 85 aa2.34□□□□□ -2.03
RPL40AYIL148W COR1P07256 457 aa2.33□□□□□ -2.04
RPL40AYIL148W SPS4P09937 338 aa2.33□□□□□ -2.04
RPL40AYIL148W YER190C-BP0CX94 160 aa2.33□□□□□ -2.04
RPL40AYIL148W YEL077W-AP0CX95 160 aa2.33□□□□□ -2.04
RPL40AYIL148W YGR296C-BP0CX96 160 aa2.33□□□□□ -2.04
RPL40AYIL148W YPL283W-BP0CX97 160 aa2.33□□□□□ -2.04
RPL40AYIL148W YPR204C-AP0CX98 160 aa2.33□□□□□ -2.04
RPL40AYIL148W EXO70P19658 623 aa2.33□□□□□ -2.04
RPL40AYIL148W TYR1P20049 452 aa2.33□□□□□ -2.04
RPL40AYIL148W SEC62P21825 274 aa2.33□□□□□ -2.04
RPL40AYIL148W MGR1P25573 417 aa2.33□□□□□ -2.04
RPL40AYIL148W IDH2P28241 369 aaKnown RBP2.33□□□□□ -2.04
RPL40AYIL148W RPN2P32565 945 aaKnown RBP2.33□□□□□ -2.04
RPL40AYIL148W TFB1P32776 642 aa2.33□□□□□ -2.04
RPL40AYIL148W ATO2P32907 282 aa2.33□□□□□ -2.04
RPL40AYIL148W SAS3P34218 831 aa2.33□□□□□ -2.04
RPL40AYIL148W PEX5P35056 612 aa2.33□□□□□ -2.04
RPL40AYIL148W APE3P37302 537 aaKnown RBP2.33□□□□□ -2.04
RPL40AYIL148W SRP72P38688 640 aaKnown RBP2.33□□□□□ -2.04
RPL40AYIL148W GND1P38720 489 aaKnown RBP2.33□□□□□ -2.04
RPL40AYIL148W BZZ1P38822 633 aa2.33□□□□□ -2.04
RPL40AYIL148W YHR210CP38893 341 aa2.33□□□□□ -2.04
RPL40AYIL148W MBB1P39534 108 aa2.33□□□□□ -2.04
RPL40AYIL148W YJL068CP40363 299 aa2.33□□□□□ -2.04
RPL40AYIL148W FET5P43561 622 aa2.33□□□□□ -2.04
RPL40AYIL148W RMD9P53140 646 aaKnown RBP2.33□□□□□ -2.04
RPL40AYIL148W PKP2P53170 491 aa2.33□□□□□ -2.04
RPL40AYIL148W ZPR1P53303 486 aaKnown RBP2.33□□□□□ -2.04
RPL40AYIL148W JJJ1P53863 590 aa2.33□□□□□ -2.04
RPL40AYIL148W ESBP6P53918 673 aa2.33□□□□□ -2.04
RPL40AYIL148W BET4Q00618 327 aa2.33□□□□□ -2.04
RPL40AYIL148W NUP100Q02629 959 aa2.33□□□□□ -2.04
RPL40AYIL148W YMR254CQ04838 102 aa2.33□□□□□ -2.04
RPL40AYIL148W COQ9Q05779 260 aa2.33□□□□□ -2.04
RPL40AYIL148W RTT109Q07794 436 aa2.33□□□□□ -2.04
RPL40AYIL148W GRX6Q12438 231 aa2.33□□□□□ -2.04
RPL40AYIL148W SMC6Q12749 1114 aa2.33□□□□□ -2.04
RPL40AYIL148W CAR1P00812 333 aaKnown RBP2.32□□□□□ -2.04
RPL40AYIL148W RHO2P06781 192 aa2.32□□□□□ -2.04
RPL40AYIL148W PDX1P16451 410 aa2.32□□□□□ -2.04
RPL40AYIL148W PRP2P20095 876 aaPredicted RBP2.32□□□□□ -2.04
RPL40AYIL148W YCP4P25349 247 aaKnown RBP2.32□□□□□ -2.04
RPL40AYIL148W CDC60P26637 1090 aaKnown RBP2.32□□□□□ -2.04
RPL40AYIL148W SEC66P33754 206 aa2.32□□□□□ -2.04
RPL40AYIL148W RSM22P36056 628 aa2.32□□□□□ -2.04
RPL40AYIL148W YIL169CP40442 995 aa2.32□□□□□ -2.04
RPL40AYIL148W AZF1P41696 914 aa2.32□□□□□ -2.04
RPL40AYIL148W ELP2P42935 788 aa2.32□□□□□ -2.04
RPL40AYIL148W DLD2P46681 530 aaKnown RBP2.32□□□□□ -2.04
RPL40AYIL148W URB2P47108 1174 aa2.32□□□□□ -2.04
RPL40AYIL148W YJR154WP47181 346 aa2.32□□□□□ -2.04
RPL40AYIL148W YGR149WP48236 432 aa2.32□□□□□ -2.04
RPL40AYIL148W FMS1P50264 508 aa2.32□□□□□ -2.04
RPL40AYIL148W OCA1P50946 238 aaPredicted RBP2.32□□□□□ -2.04
RPL40AYIL148W TDA7P53882 636 aaPredicted RBP2.32□□□□□ -2.04
RPL40AYIL148W RHO4Q00246 291 aa2.32□□□□□ -2.04
RPL40AYIL148W RMT2Q03305 412 aa2.32□□□□□ -2.04
RPL40AYIL148W MSS11Q03825 758 aa2.32□□□□□ -2.04
RPL40AYIL148W IVY1Q04934 453 aa2.32□□□□□ -2.04
RPL40AYIL148W FMP42Q04991 504 aa2.32□□□□□ -2.04
RPL40AYIL148W YMR034CQ05131 434 aaPredicted RBP2.32□□□□□ -2.04
RPL40AYIL148W RRP45Q05636 305 aaKnown RBP2.32□□□□□ -2.04
RPL40AYIL148W FMP45Q07651 309 aa2.32□□□□□ -2.04
RPL40AYIL148W MLH2Q07980 695 aa2.32□□□□□ -2.04
RPL40AYIL148W NRT1Q08485 598 aa2.32□□□□□ -2.04
RPL40AYIL148W SPB1P25582 841 aaPredicted RBP2.31□□□□□ -2.04
RPL40AYIL148W YCR051WP25631 222 aa2.31□□□□□ -2.04
RPL40AYIL148W ACH1P32316 526 aa2.31□□□□□ -2.04
RPL40AYIL148W ARA1P38115 344 aa2.31□□□□□ -2.04
RPL40AYIL148W TCM62P38228 572 aaKnown RBP2.31□□□□□ -2.04
RPL40AYIL148W LEU5P38702 357 aa2.31□□□□□ -2.04
RPL40AYIL148W MET30P39014 640 aa2.31□□□□□ -2.04
RPL40AYIL148W YTA12P40341 825 aa2.31□□□□□ -2.04
RPL40AYIL148W ATG27P46989 271 aa2.31□□□□□ -2.04
RPL40AYIL148W YGL138CP53122 345 aa2.31□□□□□ -2.04
RPL40AYIL148W GPI1P53306 609 aa2.31□□□□□ -2.04
RPL40AYIL148W BUD32P53323 261 aa2.31□□□□□ -2.04
RPL40AYIL148W SAM50P53969 484 aa2.31□□□□□ -2.04
RPL40AYIL148W HEF3P53978 1044 aaKnown RBP2.31□□□□□ -2.04
RPL40AYIL148W DIG1Q03063 452 aaKnown RBP2.31□□□□□ -2.04
RPL40AYIL148W MSC1Q03104 513 aa2.31□□□□□ -2.04
RPL40AYIL148W GRS2Q06817 618 aa2.31□□□□□ -2.04
RPL40AYIL148W HSP42Q12329 375 aa2.31□□□□□ -2.04
RPL40AYIL148W PDH1Q12428 516 aaKnown RBP2.31□□□□□ -2.04
RPL40AYIL148W CSR2Q12734 1121 aa2.31□□□□□ -2.04
RPL40AYIL148W AFI1Q99222 893 aa2.31□□□□□ -2.04
RPL40AYIL148W LEU4P06208 619 aaKnown RBP2.3□□□□□ -2.04
RPL40AYIL148W RAD52P06778 471 aaKnown RBP2.3□□□□□ -2.04
RPL40AYIL148W PEP4P07267 405 aaKnown RBP2.3□□□□□ -2.04
RPL40AYIL148W APE1P14904 514 aa2.3□□□□□ -2.04
RPL40AYIL148W PPH22P23595 377 aa2.3□□□□□ -2.04
RPL40AYIL148W ERG1P32476 496 aaKnown RBP2.3□□□□□ -2.04
RPL40AYIL148W VMA8P32610 256 aaKnown RBP2.3□□□□□ -2.04
RPL40AYIL148W UTR4P32626 227 aa2.3□□□□□ -2.04
RPL40AYIL148W GYP6P32806 458 aa2.3□□□□□ -2.04
RPL40AYIL148W TUL1P36096 758 aa2.3□□□□□ -2.04
RPL40AYIL148W DUG2P38149 878 aa2.3□□□□□ -2.04
RPL40AYIL148W ARC40P38328 384 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 95 ms