RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W YBR139WP38109 508 aa7.37□□□□□ -1.23
PEX28YHR150W POL12P38121 705 aaPredicted RBP7.37□□□□□ -1.23
PEX28YHR150W EGD2P38879 174 aaKnown RBP7.37□□□□□ -1.23
PEX28YHR150W MTW1P39731 289 aa7.37□□□□□ -1.23
PEX28YHR150W NUP85P46673 744 aa7.37□□□□□ -1.23
PEX28YHR150W BUD13P46947 266 aaPredicted RBP7.37□□□□□ -1.23
PEX28YHR150W TY4A-JP47023 414 aa7.37□□□□□ -1.23
PEX28YHR150W PSP1P50896 841 aaKnown RBP7.37□□□□□ -1.23
PEX28YHR150W YMR111CQ04461 462 aaPredicted RBP7.37□□□□□ -1.23
PEX28YHR150W RTN1Q04947 295 aaKnown RBP7.37□□□□□ -1.23
PEX28YHR150W SSQ1Q05931 657 aaPredicted RBP7.37□□□□□ -1.23
PEX28YHR150W VAM6Q07468 1049 aa7.37□□□□□ -1.23
PEX28YHR150W YOR389WQ08912 624 aa7.37□□□□□ -1.23
PEX28YHR150W YPL191CQ08930 360 aa7.37□□□□□ -1.23
PEX28YHR150W HER1Q12276 1246 aa7.37□□□□□ -1.23
PEX28YHR150W TPK3P05986 398 aa7.36□□□□□ -1.23
PEX28YHR150W MET17P06106 444 aa7.36□□□□□ -1.23
PEX28YHR150W MRPL8P22353 238 aa7.36□□□□□ -1.23
PEX28YHR150W UBA1P22515 1024 aaKnown RBP7.36□□□□□ -1.23
PEX28YHR150W ARP2P32381 391 aaKnown RBP7.36□□□□□ -1.23
PEX28YHR150W MF(ALPHA)2P32435 120 aa7.36□□□□□ -1.23
PEX28YHR150W APM3P38153 483 aa7.36□□□□□ -1.23
PEX28YHR150W KRE29P40026 464 aa7.36□□□□□ -1.23
PEX28YHR150W RGI1P40043 161 aaPredicted RBP7.36□□□□□ -1.23
PEX28YHR150W UTP18P40362 594 aaPredicted RBP7.36□□□□□ -1.23
PEX28YHR150W GTO1P48239 356 aa7.36□□□□□ -1.23
PEX28YHR150W YMR010WQ03687 405 aa7.36□□□□□ -1.23
PEX28YHR150W YMR206WQ03695 313 aa7.36□□□□□ -1.23
PEX28YHR150W BSP1Q06604 576 aa7.36□□□□□ -1.23
PEX28YHR150W NTG2Q08214 380 aa7.36□□□□□ -1.23
PEX28YHR150W HRK1Q08732 759 aaKnown RBP7.36□□□□□ -1.23
PEX28YHR150W PEX11Q12462 236 aa7.36□□□□□ -1.23
PEX28YHR150W YOL159C-AQ3E769 90 aa7.36□□□□□ -1.23
PEX28YHR150W RPS9AO13516 197 aaKnown RBP7.35□□□□□ -1.23
PEX28YHR150W HXK2P04807 486 aaKnown RBP7.35□□□□□ -1.23
PEX28YHR150W HTA2P04912 132 aa7.35□□□□□ -1.23
PEX28YHR150W RAD7P06779 565 aa7.35□□□□□ -1.23
PEX28YHR150W DST1P07273 309 aa7.35□□□□□ -1.23
PEX28YHR150W POL30P15873 258 aaKnown RBP7.35□□□□□ -1.23
PEX28YHR150W PEX34P25584 144 aa7.35□□□□□ -1.23
PEX28YHR150W SBA1P28707 216 aaKnown RBP7.35□□□□□ -1.23
PEX28YHR150W SFP1P32432 683 aa7.35□□□□□ -1.23
PEX28YHR150W APE2P32454 952 aaKnown RBP7.35□□□□□ -1.23
PEX28YHR150W MEI5P32489 222 aa7.35□□□□□ -1.23
PEX28YHR150W CDC5P32562 705 aa7.35□□□□□ -1.23
PEX28YHR150W YHR045WP38775 560 aa7.35□□□□□ -1.23
PEX28YHR150W PAN6P40459 309 aa7.35□□□□□ -1.23
PEX28YHR150W GCD10P41814 478 aa7.35□□□□□ -1.23
PEX28YHR150W YGL176CP46945 554 aa7.35□□□□□ -1.23
PEX28YHR150W SIP4P46954 829 aa7.35□□□□□ -1.23
PEX28YHR150W TIS11P47977 285 aa7.35□□□□□ -1.23
PEX28YHR150W TLG1Q03322 224 aa7.35□□□□□ -1.23
PEX28YHR150W YDR132CQ03900 495 aa7.35□□□□□ -1.23
PEX28YHR150W FMP45Q07651 309 aa7.35□□□□□ -1.23
PEX28YHR150W RPN13O13563 156 aa7.35□□□□□ -1.23
PEX28YHR150W MF(ALPHA)1P01149 165 aa7.35□□□□□ -1.23
PEX28YHR150W REP1P03871 373 aa7.35□□□□□ -1.23
PEX28YHR150W DAL81P21657 970 aa7.35□□□□□ -1.23
PEX28YHR150W GBP2P25555 427 aaKnown RBP RIP-Chip data7.35□□□□□ -1.23not detected
PEX28YHR150W RPS1AP33442 255 aaKnown RBP7.35□□□□□ -1.23
PEX28YHR150W YPK3P38070 525 aa7.35□□□□□ -1.23
PEX28YHR150W FTH1P38310 465 aa7.35□□□□□ -1.23
PEX28YHR150W GND1P38720 489 aaKnown RBP7.35□□□□□ -1.23
PEX28YHR150W ARF3P40994 183 aaRIP-Chip data7.35□□□□□ -1.23not detected
PEX28YHR150W STB2P46679 850 aa7.35□□□□□ -1.23
PEX28YHR150W NAS6P50086 228 aa7.35□□□□□ -1.23
PEX28YHR150W YNR068CP53754 272 aa7.35□□□□□ -1.23
PEX28YHR150W YNL143CP53908 130 aa7.35□□□□□ -1.23
PEX28YHR150W RPN6Q12377 434 aa7.35□□□□□ -1.23
PEX28YHR150W MED11Q99278 115 aa7.35□□□□□ -1.23
PEX28YHR150W RAS2P01120 322 aaKnown RBP7.34□□□□□ -1.23
PEX28YHR150W SPT3P06844 337 aa7.34□□□□□ -1.23
PEX28YHR150W PPH22P23595 377 aa7.34□□□□□ -1.23
PEX28YHR150W PPZ1P26570 692 aa7.34□□□□□ -1.23
PEX28YHR150W YKL100CP34248 587 aa7.34□□□□□ -1.23
PEX28YHR150W LDB7P38210 180 aa7.34□□□□□ -1.23
PEX28YHR150W ECM8P38246 354 aa7.34□□□□□ -1.23
PEX28YHR150W MEP2P41948 499 aa7.34□□□□□ -1.23
PEX28YHR150W REF2P42073 533 aaPredicted RBP7.34□□□□□ -1.23
PEX28YHR150W AIM14P53109 570 aa7.34□□□□□ -1.23
PEX28YHR150W SLD3P53135 668 aa7.34□□□□□ -1.23
PEX28YHR150W SHY1P53266 389 aa7.34□□□□□ -1.23
PEX28YHR150W BNI4P53858 892 aa7.34□□□□□ -1.23
PEX28YHR150W ORC3P54790 616 aa7.34□□□□□ -1.23
PEX28YHR150W CIK1Q01649 594 aa7.34□□□□□ -1.23
PEX28YHR150W SWP1Q02795 286 aa7.34□□□□□ -1.23
PEX28YHR150W APC4Q04601 652 aa7.34□□□□□ -1.23
PEX28YHR150W YDR124WQ04608 324 aa7.34□□□□□ -1.23
PEX28YHR150W ENT2Q05785 613 aa7.34□□□□□ -1.23
PEX28YHR150W VTA1Q06263 330 aa7.34□□□□□ -1.23
PEX28YHR150W MCP2Q06567 569 aa7.34□□□□□ -1.23
PEX28YHR150W PUS7Q08647 676 aaKnown RBP7.34□□□□□ -1.23
PEX28YHR150W SOG2Q08817 791 aa7.34□□□□□ -1.23
PEX28YHR150W NDD1Q08887 554 aa7.34□□□□□ -1.23
PEX28YHR150W MHF2Q3E829 80 aa7.34□□□□□ -1.23
PEX28YHR150W RPS4AP0CX35 261 aaKnown RBP7.33□□□□□ -1.24
PEX28YHR150W RPS4BP0CX36 261 aaKnown RBP7.33□□□□□ -1.24
PEX28YHR150W HMG2P12684 1045 aa7.33□□□□□ -1.24
PEX28YHR150W OCA4P25366 362 aa7.33□□□□□ -1.24
PEX28YHR150W BUD23P25627 275 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms